BLASTX nr result

ID: Dioscorea21_contig00003512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003512
         (936 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ87558.1| predicted protein [Hordeum vulgare subsp. vulgare]    222   1e-55
gb|ACG31599.1| transcription initiation factor TFIID subunit 9B ...   220   4e-55
ref|NP_001130845.1| uncharacterized protein LOC100191949 [Zea ma...   220   4e-55
ref|XP_003578007.1| PREDICTED: transcription initiation factor T...   219   1e-54
ref|XP_002467704.1| hypothetical protein SORBIDRAFT_01g032810 [S...   218   2e-54

>dbj|BAJ87558.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 225

 Score =  222 bits (565), Expect = 1e-55
 Identities = 120/175 (68%), Positives = 129/175 (73%), Gaps = 1/175 (0%)
 Frame = -1

Query: 867 RDARVVRELLRSMGIGEGEYESRVVLQFLELMYRYVVDVLGDAQAYAEHAGKTSLDPDDV 688
           RDARVVRELLRSMG+GEGEYE RVV QFL+L YRY  DVLGDAQ YA+HAGK  LD DDV
Sbjct: 31  RDARVVRELLRSMGLGEGEYEPRVVHQFLDLAYRYAGDVLGDAQVYADHAGKPQLDADDV 90

Query: 687 RLAIQSKVNFSFSQPPPREVLLELARSRNKIPLPKSIAPPGSIPLPPEQDTLISPNYQLL 508
           RLAIQ+KVNFSFSQPPPREVLLELARSRNKIPLPKSIAPPGSIPLPPEQDTL+S NYQLL
Sbjct: 91  RLAIQAKVNFSFSQPPPREVLLELARSRNKIPLPKSIAPPGSIPLPPEQDTLLSQNYQLL 150

Query: 507 IPKKQSGXXXXXXXXXXXXXXXXXXXXXPSQELRTGNDQQQPPQTP-QRVSFPLN 346
              K                         S + + GN+QQ  PQ+  QRVSF LN
Sbjct: 151 PALKPPTQTEEAEDEEEGANADAANPNPNSSQDQRGNEQQHQPQSQGQRVSFQLN 205


>gb|ACG31599.1| transcription initiation factor TFIID subunit 9B [Zea mays]
          Length = 225

 Score =  220 bits (560), Expect = 4e-55
 Identities = 119/179 (66%), Positives = 132/179 (73%), Gaps = 5/179 (2%)
 Frame = -1

Query: 867 RDARVVRELLRSMGIGEGEYESRVVLQFLELMYRYVVDVLGDAQAYAEHAGKTSLDPDDV 688
           RDARVVRELLRSMG+GEGEYE RVV QFL+L YRYV DVLGDAQ YA+HAGK  +D DDV
Sbjct: 28  RDARVVRELLRSMGLGEGEYEPRVVHQFLDLAYRYVGDVLGDAQVYADHAGKAQIDADDV 87

Query: 687 RLAIQSKVNFSFSQPPPREVLLELARSRNKIPLPKSIAPPGSIPLPPEQDTLISPNYQLL 508
           RLAIQ+KVNFSFSQPPPREVLLELARSRN++PLPKSIAPPGSIPLPPEQDTL++ NYQLL
Sbjct: 88  RLAIQAKVNFSFSQPPPREVLLELARSRNRMPLPKSIAPPGSIPLPPEQDTLLAQNYQLL 147

Query: 507 IPKK-----QSGXXXXXXXXXXXXXXXXXXXXXPSQELRTGNDQQQPPQTPQRVSFPLN 346
            P K     +                        SQ+ R+ N+QQ  PQ  QRVSF LN
Sbjct: 148 PPLKPPPQYEENEDENEESNPSLTPNPANSNPTXSQDQRS-NEQQHTPQHGQRVSFQLN 205


>ref|NP_001130845.1| uncharacterized protein LOC100191949 [Zea mays]
           gi|194690258|gb|ACF79213.1| unknown [Zea mays]
           gi|414867185|tpg|DAA45742.1| TPA: transcription
           initiation factor TFIID subunit 9B [Zea mays]
          Length = 225

 Score =  220 bits (560), Expect = 4e-55
 Identities = 119/179 (66%), Positives = 132/179 (73%), Gaps = 5/179 (2%)
 Frame = -1

Query: 867 RDARVVRELLRSMGIGEGEYESRVVLQFLELMYRYVVDVLGDAQAYAEHAGKTSLDPDDV 688
           RDARVVRELLRSMG+GEGEYE RVV QFL+L YRYV DVLGDAQ YA+HAGK  +D DDV
Sbjct: 28  RDARVVRELLRSMGLGEGEYEPRVVHQFLDLAYRYVGDVLGDAQVYADHAGKAQIDADDV 87

Query: 687 RLAIQSKVNFSFSQPPPREVLLELARSRNKIPLPKSIAPPGSIPLPPEQDTLISPNYQLL 508
           RLAIQ+KVNFSFSQPPPREVLLELARSRN++PLPKSIAPPGSIPLPPEQDTL++ NYQLL
Sbjct: 88  RLAIQAKVNFSFSQPPPREVLLELARSRNRMPLPKSIAPPGSIPLPPEQDTLLAQNYQLL 147

Query: 507 IPKK-----QSGXXXXXXXXXXXXXXXXXXXXXPSQELRTGNDQQQPPQTPQRVSFPLN 346
            P K     +                        SQ+ R+ N+QQ  PQ  QRVSF LN
Sbjct: 148 PPLKPPPQYEENEDENEESNPSLTPNPANSNPTFSQDQRS-NEQQHTPQHGQRVSFQLN 205


>ref|XP_003578007.1| PREDICTED: transcription initiation factor TFIID subunit 9-like
           [Brachypodium distachyon]
          Length = 224

 Score =  219 bits (557), Expect = 1e-54
 Identities = 122/178 (68%), Positives = 128/178 (71%), Gaps = 4/178 (2%)
 Frame = -1

Query: 867 RDARVVRELLRSMGIGEGEYESRVVLQFLELMYRYVVDVLGDAQAYAEHAGKTSLDPDDV 688
           RDARVVRELLRSMG+GEGEYE RVV QFL+L YRYV DVLGDAQ YA+HAGK  LD DDV
Sbjct: 26  RDARVVRELLRSMGLGEGEYEPRVVHQFLDLAYRYVGDVLGDAQVYADHAGKAQLDADDV 85

Query: 687 RLAIQSKVNFSFSQPPPREVLLELARSRNKIPLPKSIAPPGSIPLPPEQDTLISPNYQLL 508
           RLAIQ+KVNFSFSQPPPREVLLELARSRNKIPLPKSIAPPGSIPLPPEQDTL+S NYQLL
Sbjct: 86  RLAIQAKVNFSFSQPPPREVLLELARSRNKIPLPKSIAPPGSIPLPPEQDTLLSQNYQLL 145

Query: 507 IPKK---QSGXXXXXXXXXXXXXXXXXXXXXPSQELRTGNDQQQPPQT-PQRVSFPLN 346
            P K   Q                         Q+ R    QQ  P T  QRVSF LN
Sbjct: 146 PPLKAPTQVEETEEDDNEEVDTNPANPNPNYLRQDQRDNEQQQPLPHTQSQRVSFQLN 203


>ref|XP_002467704.1| hypothetical protein SORBIDRAFT_01g032810 [Sorghum bicolor]
           gi|241921558|gb|EER94702.1| hypothetical protein
           SORBIDRAFT_01g032810 [Sorghum bicolor]
          Length = 228

 Score =  218 bits (554), Expect = 2e-54
 Identities = 119/179 (66%), Positives = 130/179 (72%), Gaps = 5/179 (2%)
 Frame = -1

Query: 867 RDARVVRELLRSMGIGEGEYESRVVLQFLELMYRYVVDVLGDAQAYAEHAGKTSLDPDDV 688
           RDARVVRELLRSMG+GEGEYE RVV QFL+L YRYV DVLGDAQ YA+HAGK  +D DDV
Sbjct: 31  RDARVVRELLRSMGLGEGEYEPRVVHQFLDLAYRYVGDVLGDAQVYADHAGKAQIDADDV 90

Query: 687 RLAIQSKVNFSFSQPPPREVLLELARSRNKIPLPKSIAPPGSIPLPPEQDTLISPNYQLL 508
            LAIQ+KVNFSFSQPPPREVLLELARSRN+IPLPKSIAPPGSIPLPPEQDTL++ NYQLL
Sbjct: 91  SLAIQAKVNFSFSQPPPREVLLELARSRNRIPLPKSIAPPGSIPLPPEQDTLLAQNYQLL 150

Query: 507 IPKK-----QSGXXXXXXXXXXXXXXXXXXXXXPSQELRTGNDQQQPPQTPQRVSFPLN 346
            P K     +                        SQ+ R  N+QQ  PQ  QRVSF LN
Sbjct: 151 PPLKPPPQYEETEDENEESNPSLTPNPANSNPTFSQDQR-NNEQQHTPQHGQRVSFQLN 208


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