BLASTX nr result

ID: Dioscorea21_contig00003492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003492
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEZ00900.1| putative RNA recognition motif-containing protein...   181   2e-43
dbj|BAJ89959.1| predicted protein [Hordeum vulgare subsp. vulgare]    172   7e-41
dbj|BAJ90751.1| predicted protein [Hordeum vulgare subsp. vulgar...   169   6e-40
ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265...   166   6e-39
emb|CBI23047.3| unnamed protein product [Vitis vinifera]              166   6e-39

>gb|AEZ00900.1| putative RNA recognition motif-containing protein, partial [Elaeis
           guineensis]
          Length = 294

 Score =  181 bits (458), Expect = 2e-43
 Identities = 90/130 (69%), Positives = 102/130 (78%), Gaps = 19/130 (14%)
 Frame = -1

Query: 752 RSVAGGVRGHPVDDPRLIGVGGVDGR-------------------AVGYRSGRSETSLPP 630
           R+VAGG+ GHPVDD R++GVGG+DGR                   +VGY  GR E  LP 
Sbjct: 118 RTVAGGMTGHPVDDRRMMGVGGMDGRTVGYGGGRPEPPLGGMDGRSVGYGGGRPEPPLPQ 177

Query: 629 DASNTLFVEGLPSNCTRREVSHVFRPFVGFREVRLVSKESRHPGGDPLILCFVDFSTASQ 450
           DASNTLFVEGLP+NCTRREVSH+FRPFVGFREVRLV+KESRHPGGDPL+LCFVDFST +Q
Sbjct: 178 DASNTLFVEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPLVLCFVDFSTPAQ 237

Query: 449 AAVALEALQG 420
           AAVAL+ALQG
Sbjct: 238 AAVALDALQG 247


>dbj|BAJ89959.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 333

 Score =  172 bits (436), Expect = 7e-41
 Identities = 82/119 (68%), Positives = 98/119 (82%)
 Frame = -1

Query: 746 VAGGVRGHPVDDPRLIGVGGVDGRAVGYRSGRSETSLPPDASNTLFVEGLPSNCTRREVS 567
           V GG+ G+PVDD R++GV G+D RA+GY   R E  LPPDASNTL++EGLP+NCTRREVS
Sbjct: 143 VGGGMSGYPVDDRRMMGVVGMDSRAMGY-GARPEPPLPPDASNTLYIEGLPANCTRREVS 201

Query: 566 HVFRPFVGFREVRLVSKESRHPGGDPLILCFVDFSTASQAAVALEALQGSHYASSRFCL 390
           H+FRPFVGFREVRLV+KESRHPGGDP +LCFVDF + +QA +ALEALQG +    RF L
Sbjct: 202 HIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDSPAQATIALEALQGENTCVCRFGL 260


>dbj|BAJ90751.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326501246|dbj|BAJ98854.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 283

 Score =  169 bits (428), Expect = 6e-40
 Identities = 79/109 (72%), Positives = 94/109 (86%)
 Frame = -1

Query: 746 VAGGVRGHPVDDPRLIGVGGVDGRAVGYRSGRSETSLPPDASNTLFVEGLPSNCTRREVS 567
           V GG+ G+PVDD R++GV G+D RA+GY   R E  LPPDASNTL++EGLP+NCTRREVS
Sbjct: 143 VGGGMSGYPVDDRRMMGVVGMDSRAMGY-GARPEPPLPPDASNTLYIEGLPANCTRREVS 201

Query: 566 HVFRPFVGFREVRLVSKESRHPGGDPLILCFVDFSTASQAAVALEALQG 420
           H+FRPFVGFREVRLV+KESRHPGGDP +LCFVDF + +QA +ALEALQG
Sbjct: 202 HIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDSPAQATIALEALQG 250


>ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
          Length = 229

 Score =  166 bits (419), Expect = 6e-39
 Identities = 77/117 (65%), Positives = 96/117 (82%), Gaps = 6/117 (5%)
 Frame = -1

Query: 752 RSVAGGVRGHPVDDPRLIGVGGVD------GRAVGYRSGRSETSLPPDASNTLFVEGLPS 591
           R ++GG+  HPVDDPR++GV GVD       +++G+  GR E  LPPDAS+TLFVEGLP+
Sbjct: 80  RPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGGRPELPLPPDASSTLFVEGLPA 139

Query: 590 NCTRREVSHVFRPFVGFREVRLVSKESRHPGGDPLILCFVDFSTASQAAVALEALQG 420
           NCTRREVSH+FRPFVG++EVRLVSKESRH GGDPL+LCFVDF + + AA A++ALQG
Sbjct: 140 NCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCFVDFVSPAHAATAMDALQG 196


>emb|CBI23047.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  166 bits (419), Expect = 6e-39
 Identities = 77/117 (65%), Positives = 96/117 (82%), Gaps = 6/117 (5%)
 Frame = -1

Query: 752 RSVAGGVRGHPVDDPRLIGVGGVD------GRAVGYRSGRSETSLPPDASNTLFVEGLPS 591
           R ++GG+  HPVDDPR++GV GVD       +++G+  GR E  LPPDAS+TLFVEGLP+
Sbjct: 81  RPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGGRPELPLPPDASSTLFVEGLPA 140

Query: 590 NCTRREVSHVFRPFVGFREVRLVSKESRHPGGDPLILCFVDFSTASQAAVALEALQG 420
           NCTRREVSH+FRPFVG++EVRLVSKESRH GGDPL+LCFVDF + + AA A++ALQG
Sbjct: 141 NCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCFVDFVSPAHAATAMDALQG 197


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