BLASTX nr result

ID: Dioscorea21_contig00003486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003486
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002885992.1| hypothetical protein ARALYDRAFT_480447 [Arab...   115   5e-24
emb|CBI37235.3| unnamed protein product [Vitis vinifera]              114   8e-24
ref|XP_002521157.1| conserved hypothetical protein [Ricinus comm...   113   1e-23
ref|NP_194606.1| Tetraspanin family protein [Arabidopsis thalian...   112   2e-23
ref|NP_001190864.1| Tetraspanin family protein [Arabidopsis thal...   112   2e-23

>ref|XP_002885992.1| hypothetical protein ARALYDRAFT_480447 [Arabidopsis lyrata subsp.
           lyrata] gi|297331832|gb|EFH62251.1| hypothetical protein
           ARALYDRAFT_480447 [Arabidopsis lyrata subsp. lyrata]
          Length = 270

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/102 (52%), Positives = 71/102 (69%)
 Frame = +1

Query: 1   SAEVTNGFCLCFYALFTSILIISEAALVCDIILNQKWEKDFPRDHTGELKRLRQFIEANI 180
           +AE  NG CLCFY++  ++LI+ EAALV  I +++ WEKD P D TGEL  LR FIE NI
Sbjct: 121 AAEAINGCCLCFYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENI 180

Query: 181 DMCKWFASVVFAVQMLSIMLAMILRLMVRSKRVNTGRHEDYD 306
           D+CKW    V AVQ+LS++LAM+LR MV + +      EDY+
Sbjct: 181 DICKWVGIAVVAVQLLSLLLAMVLRAMVSTPKPELDEEEDYE 222


>emb|CBI37235.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/113 (48%), Positives = 74/113 (65%), Gaps = 3/113 (2%)
 Frame = +1

Query: 1   SAEVTNGFCLCFYALFTSILIISEAALVCDIILNQKWEKDFPRDHTGELKRLRQFIEANI 180
           +AE  NG CLCFY + T +LI+ EA L+  +  +  WEKD P D TGEL+  R FIE NI
Sbjct: 123 AAEAINGCCLCFYTMLTVLLILLEAGLIAFVAFDHHWEKDLPFDPTGELENFRSFIEGNI 182

Query: 181 DMCKWFASVVFAVQMLSIMLAMILRLMVRSKRVNTGRHEDYDAI---RKPLLN 330
           D+CKW    V ++Q LS++LAMILR MV +++ +    +DY A    R+PLLN
Sbjct: 183 DICKWVGITVVSIQALSLLLAMILRAMVSTRKTDYDIEDDYTAAGRNREPLLN 235


>ref|XP_002521157.1| conserved hypothetical protein [Ricinus communis]
           gi|223539726|gb|EEF41308.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 225

 Score =  113 bits (283), Expect = 1e-23
 Identities = 52/115 (45%), Positives = 81/115 (70%), Gaps = 4/115 (3%)
 Frame = +1

Query: 1   SAEVTNGFCLCFYALFTSILIISEAALVCDIILNQKWEKDFPRDHTGELKRLRQFIEANI 180
           +AE  NG CLCFY++  ++LI+ EA+LV  I ++++WEKD P D TGEL+ LR F+E N+
Sbjct: 82  AAEAINGCCLCFYSILKTVLILLEASLVAFIAIDRRWEKDLPFDPTGELQSLRSFVEENV 141

Query: 181 DMCKWFASVVFAVQMLSIMLAMILRLMVRSKRVNTGRHEDYDAIRK----PLLNQ 333
           D+C+W    V  +Q LS++LA+ILR ++ + R ++   +DY++ R+    PLLNQ
Sbjct: 142 DICEWIGITVIVIQALSLLLAIILRALISTGRSDSEFEDDYESGRRRTWEPLLNQ 196


>ref|NP_194606.1| Tetraspanin family protein [Arabidopsis thaliana]
           gi|75266419|sp|Q9SVU4.1|TET20_ARATH RecName:
           Full=Tetraspanin-20 gi|4218121|emb|CAA22975.1| putative
           protein [Arabidopsis thaliana]
           gi|7269732|emb|CAB81465.1| putative protein [Arabidopsis
           thaliana] gi|21554050|gb|AAM63131.1| unknown
           [Arabidopsis thaliana] gi|29029076|gb|AAO64917.1|
           At4g28770 [Arabidopsis thaliana]
           gi|110743049|dbj|BAE99417.1| hypothetical protein
           [Arabidopsis thaliana] gi|332660140|gb|AEE85540.1|
           Tetraspanin family protein [Arabidopsis thaliana]
          Length = 281

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/102 (50%), Positives = 73/102 (71%)
 Frame = +1

Query: 1   SAEVTNGFCLCFYALFTSILIISEAALVCDIILNQKWEKDFPRDHTGELKRLRQFIEANI 180
           +AE  NG CLCFY++  ++LII EAALV  I++++ WEKD P D TGEL  LR FIE NI
Sbjct: 132 AAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGELNSLRAFIEENI 191

Query: 181 DMCKWFASVVFAVQMLSIMLAMILRLMVRSKRVNTGRHEDYD 306
           D+CKW   VV A+Q+LS++LA++LR MV  ++      +D++
Sbjct: 192 DICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSELDDEDDFE 233


>ref|NP_001190864.1| Tetraspanin family protein [Arabidopsis thaliana]
           gi|332660141|gb|AEE85541.1| Tetraspanin family protein
           [Arabidopsis thaliana]
          Length = 325

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/102 (50%), Positives = 73/102 (71%)
 Frame = +1

Query: 1   SAEVTNGFCLCFYALFTSILIISEAALVCDIILNQKWEKDFPRDHTGELKRLRQFIEANI 180
           +AE  NG CLCFY++  ++LII EAALV  I++++ WEKD P D TGEL  LR FIE NI
Sbjct: 176 AAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGELNSLRAFIEENI 235

Query: 181 DMCKWFASVVFAVQMLSIMLAMILRLMVRSKRVNTGRHEDYD 306
           D+CKW   VV A+Q+LS++LA++LR MV  ++      +D++
Sbjct: 236 DICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSELDDEDDFE 277


Top