BLASTX nr result

ID: Dioscorea21_contig00003478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003478
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO32297.1| S-adenosylmethionine decarboxylase [Saccharum aru...   160   8e-38
ref|NP_001105713.1| S-adenosylmethionine decarboxylase proenzyme...   158   5e-37
gb|ACT53876.1| S-adenosylmethionine decarboxylase [Saccharum off...   158   5e-37
gb|ABO32298.1| S-adenosylmethionine decarboxylase [Saccharum hyb...   158   5e-37
gb|ACV52081.1| S-adenosylmethionine decarboxylase 3 [Sorghum bic...   156   1e-36

>gb|ABO32297.1| S-adenosylmethionine decarboxylase [Saccharum arundinaceum]
          Length = 269

 Score =  160 bits (406), Expect = 8e-38
 Identities = 78/101 (77%), Positives = 88/101 (87%)
 Frame = -3

Query: 305 MTIMSSELMSPLPVSPIGFEGYEKRLEITFSEPPLFVDPQGRGLRALSRSQIDSILDKAS 126
           M ++     +P PVS IGFEGYEKRLEI+FSE P+F DP GRGLRALSR+QIDS+LD A 
Sbjct: 1   MAVLQVAAAAPPPVSAIGFEGYEKRLEISFSEAPVFADPNGRGLRALSRAQIDSVLDLAR 60

Query: 125 CTIVSELSNKDFDSYVLSESSLFVYPYKIILKTCGTTKLLL 3
           CTIVSELSN+DFDSYVLSESSLFVYPYKI++KTCGTTKLLL
Sbjct: 61  CTIVSELSNEDFDSYVLSESSLFVYPYKIVIKTCGTTKLLL 101


>ref|NP_001105713.1| S-adenosylmethionine decarboxylase proenzyme [Zea mays]
           gi|3913427|sp|O24575.1|DCAM_MAIZE RecName:
           Full=S-adenosylmethionine decarboxylase proenzyme;
           Short=AdoMetDC; Short=SAMDC; Contains: RecName:
           Full=S-adenosylmethionine decarboxylase alpha chain;
           Contains: RecName: Full=S-adenosylmethionine
           decarboxylase beta chain; Flags: Precursor
           gi|1532073|emb|CAA69075.1| S-adenosylmethionine
           decarboxylase [Zea mays] gi|194707464|gb|ACF87816.1|
           unknown [Zea mays] gi|414586539|tpg|DAA37110.1| TPA:
           S-adenosyl methionine decarboxylase2 isoform 1 [Zea
           mays] gi|414586540|tpg|DAA37111.1| TPA: S-adenosyl
           methionine decarboxylase2 isoform 2 [Zea mays]
          Length = 400

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/89 (86%), Positives = 83/89 (93%)
 Frame = -3

Query: 269 PVSPIGFEGYEKRLEITFSEPPLFVDPQGRGLRALSRSQIDSILDKASCTIVSELSNKDF 90
           PVS IGFEGYEKRLEITFSE P+FVDP GRGLRALSR+QIDS+LD A CTIVSELSNKDF
Sbjct: 11  PVSAIGFEGYEKRLEITFSEAPVFVDPHGRGLRALSRAQIDSVLDLARCTIVSELSNKDF 70

Query: 89  DSYVLSESSLFVYPYKIILKTCGTTKLLL 3
           DSYVLSESSLF+YP KI++KTCGTTKLLL
Sbjct: 71  DSYVLSESSLFIYPLKIVIKTCGTTKLLL 99


>gb|ACT53876.1| S-adenosylmethionine decarboxylase [Saccharum officinarum]
          Length = 399

 Score =  158 bits (399), Expect = 5e-37
 Identities = 76/101 (75%), Positives = 88/101 (87%)
 Frame = -3

Query: 305 MTIMSSELMSPLPVSPIGFEGYEKRLEITFSEPPLFVDPQGRGLRALSRSQIDSILDKAS 126
           M ++     +P PVS IGFEGYEKRLEI+FSE P+F DP GRGLRALSR+QIDS+LD A 
Sbjct: 1   MAVLQVAAAAPPPVSAIGFEGYEKRLEISFSEAPVFTDPNGRGLRALSRAQIDSVLDLAR 60

Query: 125 CTIVSELSNKDFDSYVLSESSLFVYPYKIILKTCGTTKLLL 3
           CTIVS+LSN+DFDSYVLSESSLFVYPYK+++KTCGTTKLLL
Sbjct: 61  CTIVSKLSNEDFDSYVLSESSLFVYPYKMVIKTCGTTKLLL 101


>gb|ABO32298.1| S-adenosylmethionine decarboxylase [Saccharum hybrid cultivar
           Funong 95-1702]
          Length = 399

 Score =  158 bits (399), Expect = 5e-37
 Identities = 76/101 (75%), Positives = 88/101 (87%)
 Frame = -3

Query: 305 MTIMSSELMSPLPVSPIGFEGYEKRLEITFSEPPLFVDPQGRGLRALSRSQIDSILDKAS 126
           M ++     +P PVS IGFEGYEKRLEI+FSE P+F DP GRGLRALSR+QIDS+LD A 
Sbjct: 1   MAVLQVAAAAPPPVSAIGFEGYEKRLEISFSEAPVFTDPNGRGLRALSRAQIDSVLDLAR 60

Query: 125 CTIVSELSNKDFDSYVLSESSLFVYPYKIILKTCGTTKLLL 3
           CTIVS+LSN+DFDSYVLSESSLFVYPYK+++KTCGTTKLLL
Sbjct: 61  CTIVSKLSNEDFDSYVLSESSLFVYPYKMVIKTCGTTKLLL 101


>gb|ACV52081.1| S-adenosylmethionine decarboxylase 3 [Sorghum bicolor]
           gi|257220654|gb|ACV52083.1| S-adenosylmethionine
           decarboxylase 3 [Sorghum bicolor]
          Length = 397

 Score =  156 bits (395), Expect = 1e-36
 Identities = 76/89 (85%), Positives = 82/89 (92%)
 Frame = -3

Query: 269 PVSPIGFEGYEKRLEITFSEPPLFVDPQGRGLRALSRSQIDSILDKASCTIVSELSNKDF 90
           PVS IGFEGYEKRLEITFSE P+F DP GRGLRALSR+QIDS+LD A CTIVSELSNKDF
Sbjct: 11  PVSAIGFEGYEKRLEITFSEAPVFADPHGRGLRALSRAQIDSVLDLARCTIVSELSNKDF 70

Query: 89  DSYVLSESSLFVYPYKIILKTCGTTKLLL 3
           DSYVLSESSLF+YP KI++KTCGTTKLLL
Sbjct: 71  DSYVLSESSLFIYPLKIVIKTCGTTKLLL 99


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