BLASTX nr result

ID: Dioscorea21_contig00003466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003466
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE46027.1| 60S ribosomal protein L21 [Elaeis guineensis]          141   5e-32
ref|XP_002309287.1| predicted protein [Populus trichocarpa] gi|1...   140   8e-32
gb|AAC78102.1| 60S ribosomal protein L21 [Oryza sativa Japonica ...   140   1e-31
ref|NP_001064799.1| Os10g0465800 [Oryza sativa Japonica Group] g...   140   1e-31
ref|XP_003558840.1| PREDICTED: 60S ribosomal protein L21-1-like ...   140   1e-31

>gb|AGE46027.1| 60S ribosomal protein L21 [Elaeis guineensis]
          Length = 164

 Score =  141 bits (356), Expect = 5e-32
 Identities = 67/75 (89%), Positives = 71/75 (94%)
 Frame = +3

Query: 3   HVRVEHVQPSRCAEEFCLRIKKNDQQKAEAKARGEVISTKRQPEGPKPGFMVEGATLETV 182
           HVRVEHV PSRC E+F LRI+KNDQ KAEAKARG++ISTKRQPEGPKPGFMVEGATLETV
Sbjct: 90  HVRVEHVLPSRCQEDFRLRIRKNDQLKAEAKARGDIISTKRQPEGPKPGFMVEGATLETV 149

Query: 183 TPIPYDVVNDLKGGY 227
           TPIPYDVVNDLKGGY
Sbjct: 150 TPIPYDVVNDLKGGY 164


>ref|XP_002309287.1| predicted protein [Populus trichocarpa] gi|118488898|gb|ABK96258.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222855263|gb|EEE92810.1| predicted protein [Populus
           trichocarpa]
          Length = 164

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/75 (90%), Positives = 70/75 (93%)
 Frame = +3

Query: 3   HVRVEHVQPSRCAEEFCLRIKKNDQQKAEAKARGEVISTKRQPEGPKPGFMVEGATLETV 182
           HVRVEH+ PSRC EEF LR KKNDQ KAEAKARGEVISTKRQP+GPKPGFMVEGATLETV
Sbjct: 90  HVRVEHLLPSRCTEEFRLRKKKNDQLKAEAKARGEVISTKRQPQGPKPGFMVEGATLETV 149

Query: 183 TPIPYDVVNDLKGGY 227
           TPIPYDVVNDLKGGY
Sbjct: 150 TPIPYDVVNDLKGGY 164


>gb|AAC78102.1| 60S ribosomal protein L21 [Oryza sativa Japonica Group]
          Length = 164

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/75 (90%), Positives = 70/75 (93%)
 Frame = +3

Query: 3   HVRVEHVQPSRCAEEFCLRIKKNDQQKAEAKARGEVISTKRQPEGPKPGFMVEGATLETV 182
           HVRVEHVQPSRC EEF LR  KNDQ KA+AKARGEVISTKRQP+GPKPGFMVEGATLETV
Sbjct: 90  HVRVEHVQPSRCTEEFRLRKIKNDQLKADAKARGEVISTKRQPQGPKPGFMVEGATLETV 149

Query: 183 TPIPYDVVNDLKGGY 227
           TPIPYDVVNDLKGGY
Sbjct: 150 TPIPYDVVNDLKGGY 164


>ref|NP_001064799.1| Os10g0465800 [Oryza sativa Japonica Group]
           gi|13489167|gb|AAK27801.1|AC022457_4 60S ribosomal
           protein L21 [Oryza sativa Japonica Group]
           gi|31432571|gb|AAP54186.1| 60S ribosomal protein L21,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113639408|dbj|BAF26713.1| Os10g0465800 [Oryza sativa
           Japonica Group]
          Length = 164

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/75 (90%), Positives = 70/75 (93%)
 Frame = +3

Query: 3   HVRVEHVQPSRCAEEFCLRIKKNDQQKAEAKARGEVISTKRQPEGPKPGFMVEGATLETV 182
           HVRVEHVQPSRC EEF LR  KNDQ KA+AKARGEVISTKRQP+GPKPGFMVEGATLETV
Sbjct: 90  HVRVEHVQPSRCTEEFRLRKIKNDQLKADAKARGEVISTKRQPQGPKPGFMVEGATLETV 149

Query: 183 TPIPYDVVNDLKGGY 227
           TPIPYDVVNDLKGGY
Sbjct: 150 TPIPYDVVNDLKGGY 164


>ref|XP_003558840.1| PREDICTED: 60S ribosomal protein L21-1-like [Brachypodium
           distachyon]
          Length = 164

 Score =  140 bits (352), Expect = 1e-31
 Identities = 68/75 (90%), Positives = 69/75 (92%)
 Frame = +3

Query: 3   HVRVEHVQPSRCAEEFCLRIKKNDQQKAEAKARGEVISTKRQPEGPKPGFMVEGATLETV 182
           HVRVEHVQPSRCAEEF LR  KNDQ KAEAKARGEVISTKRQP GPKPGFMVEG T+ETV
Sbjct: 90  HVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPAGPKPGFMVEGTTIETV 149

Query: 183 TPIPYDVVNDLKGGY 227
           TPIPYDVVNDLKGGY
Sbjct: 150 TPIPYDVVNDLKGGY 164


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