BLASTX nr result

ID: Dioscorea21_contig00003457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003457
         (1409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC78963.1| hypothetical protein OsI_19432 [Oryza sativa Indi...   437   e-120
ref|NP_001055172.1| Os05g0316000 [Oryza sativa Japonica Group] g...   437   e-120
ref|NP_001150151.1| LOC100283780 [Zea mays] gi|195637146|gb|ACG3...   436   e-120
ref|XP_002440869.1| hypothetical protein SORBIDRAFT_09g010430 [S...   436   e-120
ref|XP_002323102.1| predicted protein [Populus trichocarpa] gi|2...   433   e-119

>gb|EEC78963.1| hypothetical protein OsI_19432 [Oryza sativa Indica Group]
          Length = 463

 Score =  437 bits (1124), Expect = e-120
 Identities = 223/329 (67%), Positives = 244/329 (74%), Gaps = 5/329 (1%)
 Frame = -2

Query: 1315 TSANSTPLSVPGAGNGQSSDGEGSP-----AAGGNGRDSSYQRYDIQQLARWXXXXXXXX 1151
            T+A     +   AG G  +D E S      A+G  G D +YQRYD+  +ARW        
Sbjct: 129  TAAGDVDPASAAAGRGGGADAEASGGGADGASGNGGGDRAYQRYDVHHVARWIEQILPFS 188

Query: 1150 XXXXXVFIRQHLQGFFGTIWIAAVMFKSNDILRKQTALKGERKISVLIGITLLFMIHVFS 971
                 VFIRQHLQGFF TIWIAAVMFKSNDILRKQTALKGERKI+VL+GIT++FMIHVF 
Sbjct: 189  LLLLVVFIRQHLQGFFVTIWIAAVMFKSNDILRKQTALKGERKIAVLVGITVIFMIHVFG 248

Query: 970  VYWWYRNDDVXXXXXXXXXXXXXPFWHAIFIIMVNDTMVRQAAMVAKCVLLIXXXXXXXX 791
            VYWWYRNDD+             PFWHAIFIIMVNDTMVRQAAM  KC+LL+        
Sbjct: 249  VYWWYRNDDLLRPLFMLPPKEIPPFWHAIFIIMVNDTMVRQAAMAIKCMLLMYYKNSRGR 308

Query: 790  XXXRQGQMXXXXXXXXXXXXXXXXXXVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEK 611
               +QGQM                  VWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEK
Sbjct: 309  NYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEK 368

Query: 610  VQSFITSLKALSRKDVHYGSYATAEQVIAAGDLCAICQEKMHVPILLRCKHIFCEDCVSE 431
            VQSF+ ++KALSRKDVHYGSYATAEQVIAAGD+CAICQEKMHVP+LLRCKHIFCEDCVSE
Sbjct: 369  VQSFLAAVKALSRKDVHYGSYATAEQVIAAGDMCAICQEKMHVPVLLRCKHIFCEDCVSE 428

Query: 430  WFERERTCPLCRALVKPADLRSFGDGSTS 344
            WFERERTCPLCRALVKPAD+RSFGDGSTS
Sbjct: 429  WFERERTCPLCRALVKPADIRSFGDGSTS 457


>ref|NP_001055172.1| Os05g0316000 [Oryza sativa Japonica Group]
            gi|113578723|dbj|BAF17086.1| Os05g0316000 [Oryza sativa
            Japonica Group] gi|222631088|gb|EEE63220.1| hypothetical
            protein OsJ_18030 [Oryza sativa Japonica Group]
          Length = 463

 Score =  437 bits (1124), Expect = e-120
 Identities = 223/329 (67%), Positives = 244/329 (74%), Gaps = 5/329 (1%)
 Frame = -2

Query: 1315 TSANSTPLSVPGAGNGQSSDGEGSP-----AAGGNGRDSSYQRYDIQQLARWXXXXXXXX 1151
            T+A     +   AG G  +D E S      A+G  G D +YQRYD+  +ARW        
Sbjct: 129  TAAGDVDPASAAAGRGGGADAEASGGGADGASGNGGGDRAYQRYDVHHVARWIEQILPFS 188

Query: 1150 XXXXXVFIRQHLQGFFGTIWIAAVMFKSNDILRKQTALKGERKISVLIGITLLFMIHVFS 971
                 VFIRQHLQGFF TIWIAAVMFKSNDILRKQTALKGERKI+VL+GIT++FMIHVF 
Sbjct: 189  LLLLVVFIRQHLQGFFVTIWIAAVMFKSNDILRKQTALKGERKIAVLVGITVIFMIHVFG 248

Query: 970  VYWWYRNDDVXXXXXXXXXXXXXPFWHAIFIIMVNDTMVRQAAMVAKCVLLIXXXXXXXX 791
            VYWWYRNDD+             PFWHAIFIIMVNDTMVRQAAM  KC+LL+        
Sbjct: 249  VYWWYRNDDLLRPLFMLPPKEIPPFWHAIFIIMVNDTMVRQAAMAIKCMLLMYYKNSRGR 308

Query: 790  XXXRQGQMXXXXXXXXXXXXXXXXXXVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEK 611
               +QGQM                  VWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEK
Sbjct: 309  NYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEK 368

Query: 610  VQSFITSLKALSRKDVHYGSYATAEQVIAAGDLCAICQEKMHVPILLRCKHIFCEDCVSE 431
            VQSF+ ++KALSRKDVHYGSYATAEQVIAAGD+CAICQEKMHVP+LLRCKHIFCEDCVSE
Sbjct: 369  VQSFLAAVKALSRKDVHYGSYATAEQVIAAGDMCAICQEKMHVPVLLRCKHIFCEDCVSE 428

Query: 430  WFERERTCPLCRALVKPADLRSFGDGSTS 344
            WFERERTCPLCRALVKPAD+RSFGDGSTS
Sbjct: 429  WFERERTCPLCRALVKPADIRSFGDGSTS 457


>ref|NP_001150151.1| LOC100283780 [Zea mays] gi|195637146|gb|ACG38041.1| zinc finger,
            C3HC4 type family protein [Zea mays]
            gi|238015116|gb|ACR38593.1| unknown [Zea mays]
            gi|413944909|gb|AFW77558.1| putative RING zinc finger
            domain superfamily protein [Zea mays]
          Length = 452

 Score =  436 bits (1122), Expect = e-120
 Identities = 221/319 (69%), Positives = 242/319 (75%), Gaps = 3/319 (0%)
 Frame = -2

Query: 1291 SVPGAGNGQS---SDGEGSPAAGGNGRDSSYQRYDIQQLARWXXXXXXXXXXXXXVFIRQ 1121
            S  G G G +   ++G G+  +G  G D +YQRYD+  +ARW             VFIRQ
Sbjct: 128  SAAGRGAGATDAEANGGGAGTSGNGGGDRAYQRYDVHHVARWFEQILPFSLLLLVVFIRQ 187

Query: 1120 HLQGFFGTIWIAAVMFKSNDILRKQTALKGERKISVLIGITLLFMIHVFSVYWWYRNDDV 941
            HLQGFF TIWIAAVMFKSNDILRKQTALKGERKISVLIGIT++FMIHVF VYWWYRNDD+
Sbjct: 188  HLQGFFVTIWIAAVMFKSNDILRKQTALKGERKISVLIGITVIFMIHVFGVYWWYRNDDL 247

Query: 940  XXXXXXXXXXXXXPFWHAIFIIMVNDTMVRQAAMVAKCVLLIXXXXXXXXXXXRQGQMXX 761
                         PFWHAIF+IMVNDTMVRQAAM  KC+LL+           RQGQM  
Sbjct: 248  LRPLFMLPPKDIPPFWHAIFVIMVNDTMVRQAAMAVKCMLLLYYKNCRGRNYRRQGQMLT 307

Query: 760  XXXXXXXXXXXXXXXXVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQSFITSLKA 581
                            VWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQSF+ ++KA
Sbjct: 308  LVEYLLLLYRALLPTSVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQSFLAAVKA 367

Query: 580  LSRKDVHYGSYATAEQVIAAGDLCAICQEKMHVPILLRCKHIFCEDCVSEWFERERTCPL 401
            LSRKDVHYGSYATAEQV+AAGD+CAICQEKMHVP+LLRCKHIFCEDCVSEWFERERTCPL
Sbjct: 368  LSRKDVHYGSYATAEQVLAAGDMCAICQEKMHVPVLLRCKHIFCEDCVSEWFERERTCPL 427

Query: 400  CRALVKPADLRSFGDGSTS 344
            CRALVKPAD+RSFGDGSTS
Sbjct: 428  CRALVKPADIRSFGDGSTS 446


>ref|XP_002440869.1| hypothetical protein SORBIDRAFT_09g010430 [Sorghum bicolor]
            gi|241946154|gb|EES19299.1| hypothetical protein
            SORBIDRAFT_09g010430 [Sorghum bicolor]
          Length = 452

 Score =  436 bits (1120), Expect = e-120
 Identities = 222/333 (66%), Positives = 245/333 (73%), Gaps = 5/333 (1%)
 Frame = -2

Query: 1327 EALNTSANSTPLSVPGAGNGQSS-----DGEGSPAAGGNGRDSSYQRYDIQQLARWXXXX 1163
            + + T+A S       AG G  +     +G G+  +G  G D +YQRYD+  +ARW    
Sbjct: 114  DLIETTAGSEVDQASAAGRGAGATDAETNGGGAGTSGNGGGDRAYQRYDVHHVARWIEQI 173

Query: 1162 XXXXXXXXXVFIRQHLQGFFGTIWIAAVMFKSNDILRKQTALKGERKISVLIGITLLFMI 983
                     VFIRQHLQGFF TIWIAAVMFKSNDILRKQTALKGERKISVLIGIT++FMI
Sbjct: 174  LPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNDILRKQTALKGERKISVLIGITVIFMI 233

Query: 982  HVFSVYWWYRNDDVXXXXXXXXXXXXXPFWHAIFIIMVNDTMVRQAAMVAKCVLLIXXXX 803
            HVF VYWWYRNDD+             PFWHAIF+IMVNDT VRQAAM  KC+LL+    
Sbjct: 234  HVFGVYWWYRNDDLLRPLFMLPPKDIPPFWHAIFVIMVNDTTVRQAAMAVKCMLLLYYKN 293

Query: 802  XXXXXXXRQGQMXXXXXXXXXXXXXXXXXXVWYRFFLNKEYGSLFSSLTTGLYLTFKLTS 623
                   RQGQM                  VWYRFFLNKEYGSLFSSLTTGLYLTFKLTS
Sbjct: 294  CRGRNYRRQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTS 353

Query: 622  VVEKVQSFITSLKALSRKDVHYGSYATAEQVIAAGDLCAICQEKMHVPILLRCKHIFCED 443
            VVEKVQSF+ ++KALSRKDVHYGSYATAEQV+AAGD+CAICQEKMHVP+LLRCKHIFCED
Sbjct: 354  VVEKVQSFLAAVKALSRKDVHYGSYATAEQVLAAGDMCAICQEKMHVPVLLRCKHIFCED 413

Query: 442  CVSEWFERERTCPLCRALVKPADLRSFGDGSTS 344
            CVSEWFERERTCPLCRALVKPAD+RSFGDGSTS
Sbjct: 414  CVSEWFERERTCPLCRALVKPADIRSFGDGSTS 446


>ref|XP_002323102.1| predicted protein [Populus trichocarpa] gi|222867732|gb|EEF04863.1|
            predicted protein [Populus trichocarpa]
          Length = 444

 Score =  433 bits (1113), Expect = e-119
 Identities = 225/317 (70%), Positives = 241/317 (76%), Gaps = 4/317 (1%)
 Frame = -2

Query: 1282 GAGNGQSS----DGEGSPAAGGNGRDSSYQRYDIQQLARWXXXXXXXXXXXXXVFIRQHL 1115
            GAG  QSS    DGE +  AGGNGRDS+YQRYDIQQ+ARW             VFIRQHL
Sbjct: 122  GAGGQQSSSVSGDGEAADEAGGNGRDSTYQRYDIQQVARWIEQVLPFSLLLLVVFIRQHL 181

Query: 1114 QGFFGTIWIAAVMFKSNDILRKQTALKGERKISVLIGITLLFMIHVFSVYWWYRNDDVXX 935
            QGFF TI IA VMFKSNDILRKQTALKGERKISVL+GI+L FM+HV +VYWWY+NDD+  
Sbjct: 182  QGFFVTIGIAVVMFKSNDILRKQTALKGERKISVLVGISLAFMVHVVAVYWWYQNDDLLY 241

Query: 934  XXXXXXXXXXXPFWHAIFIIMVNDTMVRQAAMVAKCVLLIXXXXXXXXXXXRQGQMXXXX 755
                       PFWHAIFIIMVNDT+VRQAAM  KCVLLI           RQGQM    
Sbjct: 242  PLIMLPPKSIPPFWHAIFIIMVNDTLVRQAAMAFKCVLLIYYKNSRGRNYRRQGQMLTLV 301

Query: 754  XXXXXXXXXXXXXXVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQSFITSLKALS 575
                          VWYRFFLNKEYGSLFSSL TGLYLTFKLTS VEKVQSF ++LKALS
Sbjct: 302  EYLILLYRALLPAPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSFVEKVQSFFSALKALS 361

Query: 574  RKDVHYGSYATAEQVIAAGDLCAICQEKMHVPILLRCKHIFCEDCVSEWFERERTCPLCR 395
            RK+VHYG++AT+EQV AAGDLCAICQEKMH PILLRCKHIFCEDCVSEWFERERTCPLCR
Sbjct: 362  RKEVHYGAHATSEQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCR 421

Query: 394  ALVKPADLRSFGDGSTS 344
            ALVKPADLRSFGDGSTS
Sbjct: 422  ALVKPADLRSFGDGSTS 438


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