BLASTX nr result

ID: Dioscorea21_contig00003456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003456
         (1091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC78963.1| hypothetical protein OsI_19432 [Oryza sativa Indi...   503   e-140
ref|NP_001055172.1| Os05g0316000 [Oryza sativa Japonica Group] g...   503   e-140
ref|NP_001150151.1| LOC100283780 [Zea mays] gi|195637146|gb|ACG3...   496   e-138
ref|XP_002440869.1| hypothetical protein SORBIDRAFT_09g010430 [S...   495   e-138
ref|NP_001042129.1| Os01g0168400 [Oryza sativa Japonica Group] g...   493   e-137

>gb|EEC78963.1| hypothetical protein OsI_19432 [Oryza sativa Indica Group]
          Length = 463

 Score =  503 bits (1295), Expect = e-140
 Identities = 241/296 (81%), Positives = 258/296 (87%)
 Frame = +3

Query: 183  SYQRYDIQQVARWVEQILPFSLLLLVVFIRQHLQGFIGTIWIAAVMFKSNEILRKQTALK 362
            +YQRYD+  VARW+EQILPFSLLLLVVFIRQHLQGF  TIWIAAVMFKSN+ILRKQTALK
Sbjct: 168  AYQRYDVHHVARWIEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNDILRKQTALK 227

Query: 363  GERKISVLAGITLLFMIHVFGVYWWYKNDDXXXXXXXXXXKEIPPFWHAIFIIMVNDTMV 542
            GERKI+VL GIT++FMIHVFGVYWWY+NDD          KEIPPFWHAIFIIMVNDTMV
Sbjct: 228  GERKIAVLVGITVIFMIHVFGVYWWYRNDDLLRPLFMLPPKEIPPFWHAIFIIMVNDTMV 287

Query: 543  RQAAMVVKCVLLMYYKNSRGRNYRKQGQMXXXXXXXXXXXXXXXXXXXWYRFFLNKEYGS 722
            RQAAM +KC+LLMYYKNSRGRNYRKQGQM                   WYRFFLNKEYGS
Sbjct: 288  RQAAMAIKCMLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGS 347

Query: 723  LFSSLTTGLYLTFKLTSVVEKVQSFVTALKALSRKDVHYGSHATTEQVVAAGDLCAICQE 902
            LFSSLTTGLYLTFKLTSVVEKVQSF+ A+KALSRKDVHYGS+AT EQV+AAGD+CAICQE
Sbjct: 348  LFSSLTTGLYLTFKLTSVVEKVQSFLAAVKALSRKDVHYGSYATAEQVIAAGDMCAICQE 407

Query: 903  KMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF 1070
            KMH P+LLRCKHIFCEDCVSEWFERERTCPLCRALVKPAD+RSFGDGSTSLFFQLF
Sbjct: 408  KMHVPVLLRCKHIFCEDCVSEWFERERTCPLCRALVKPADIRSFGDGSTSLFFQLF 463


>ref|NP_001055172.1| Os05g0316000 [Oryza sativa Japonica Group]
            gi|113578723|dbj|BAF17086.1| Os05g0316000 [Oryza sativa
            Japonica Group] gi|222631088|gb|EEE63220.1| hypothetical
            protein OsJ_18030 [Oryza sativa Japonica Group]
          Length = 463

 Score =  503 bits (1295), Expect = e-140
 Identities = 241/296 (81%), Positives = 258/296 (87%)
 Frame = +3

Query: 183  SYQRYDIQQVARWVEQILPFSLLLLVVFIRQHLQGFIGTIWIAAVMFKSNEILRKQTALK 362
            +YQRYD+  VARW+EQILPFSLLLLVVFIRQHLQGF  TIWIAAVMFKSN+ILRKQTALK
Sbjct: 168  AYQRYDVHHVARWIEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNDILRKQTALK 227

Query: 363  GERKISVLAGITLLFMIHVFGVYWWYKNDDXXXXXXXXXXKEIPPFWHAIFIIMVNDTMV 542
            GERKI+VL GIT++FMIHVFGVYWWY+NDD          KEIPPFWHAIFIIMVNDTMV
Sbjct: 228  GERKIAVLVGITVIFMIHVFGVYWWYRNDDLLRPLFMLPPKEIPPFWHAIFIIMVNDTMV 287

Query: 543  RQAAMVVKCVLLMYYKNSRGRNYRKQGQMXXXXXXXXXXXXXXXXXXXWYRFFLNKEYGS 722
            RQAAM +KC+LLMYYKNSRGRNYRKQGQM                   WYRFFLNKEYGS
Sbjct: 288  RQAAMAIKCMLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGS 347

Query: 723  LFSSLTTGLYLTFKLTSVVEKVQSFVTALKALSRKDVHYGSHATTEQVVAAGDLCAICQE 902
            LFSSLTTGLYLTFKLTSVVEKVQSF+ A+KALSRKDVHYGS+AT EQV+AAGD+CAICQE
Sbjct: 348  LFSSLTTGLYLTFKLTSVVEKVQSFLAAVKALSRKDVHYGSYATAEQVIAAGDMCAICQE 407

Query: 903  KMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF 1070
            KMH P+LLRCKHIFCEDCVSEWFERERTCPLCRALVKPAD+RSFGDGSTSLFFQLF
Sbjct: 408  KMHVPVLLRCKHIFCEDCVSEWFERERTCPLCRALVKPADIRSFGDGSTSLFFQLF 463


>ref|NP_001150151.1| LOC100283780 [Zea mays] gi|195637146|gb|ACG38041.1| zinc finger,
            C3HC4 type family protein [Zea mays]
            gi|238015116|gb|ACR38593.1| unknown [Zea mays]
            gi|413944909|gb|AFW77558.1| putative RING zinc finger
            domain superfamily protein [Zea mays]
          Length = 452

 Score =  496 bits (1277), Expect = e-138
 Identities = 238/296 (80%), Positives = 256/296 (86%)
 Frame = +3

Query: 183  SYQRYDIQQVARWVEQILPFSLLLLVVFIRQHLQGFIGTIWIAAVMFKSNEILRKQTALK 362
            +YQRYD+  VARW EQILPFSLLLLVVFIRQHLQGF  TIWIAAVMFKSN+ILRKQTALK
Sbjct: 157  AYQRYDVHHVARWFEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNDILRKQTALK 216

Query: 363  GERKISVLAGITLLFMIHVFGVYWWYKNDDXXXXXXXXXXKEIPPFWHAIFIIMVNDTMV 542
            GERKISVL GIT++FMIHVFGVYWWY+NDD          K+IPPFWHAIF+IMVNDTMV
Sbjct: 217  GERKISVLIGITVIFMIHVFGVYWWYRNDDLLRPLFMLPPKDIPPFWHAIFVIMVNDTMV 276

Query: 543  RQAAMVVKCVLLMYYKNSRGRNYRKQGQMXXXXXXXXXXXXXXXXXXXWYRFFLNKEYGS 722
            RQAAM VKC+LL+YYKN RGRNYR+QGQM                   WYRFFLNKEYGS
Sbjct: 277  RQAAMAVKCMLLLYYKNCRGRNYRRQGQMLTLVEYLLLLYRALLPTSVWYRFFLNKEYGS 336

Query: 723  LFSSLTTGLYLTFKLTSVVEKVQSFVTALKALSRKDVHYGSHATTEQVVAAGDLCAICQE 902
            LFSSLTTGLYLTFKLTSVVEKVQSF+ A+KALSRKDVHYGS+AT EQV+AAGD+CAICQE
Sbjct: 337  LFSSLTTGLYLTFKLTSVVEKVQSFLAAVKALSRKDVHYGSYATAEQVLAAGDMCAICQE 396

Query: 903  KMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF 1070
            KMH P+LLRCKHIFCEDCVSEWFERERTCPLCRALVKPAD+RSFGDGSTSLFFQLF
Sbjct: 397  KMHVPVLLRCKHIFCEDCVSEWFERERTCPLCRALVKPADIRSFGDGSTSLFFQLF 452


>ref|XP_002440869.1| hypothetical protein SORBIDRAFT_09g010430 [Sorghum bicolor]
            gi|241946154|gb|EES19299.1| hypothetical protein
            SORBIDRAFT_09g010430 [Sorghum bicolor]
          Length = 452

 Score =  495 bits (1275), Expect = e-138
 Identities = 237/296 (80%), Positives = 256/296 (86%)
 Frame = +3

Query: 183  SYQRYDIQQVARWVEQILPFSLLLLVVFIRQHLQGFIGTIWIAAVMFKSNEILRKQTALK 362
            +YQRYD+  VARW+EQILPFSLLLLVVFIRQHLQGF  TIWIAAVMFKSN+ILRKQTALK
Sbjct: 157  AYQRYDVHHVARWIEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNDILRKQTALK 216

Query: 363  GERKISVLAGITLLFMIHVFGVYWWYKNDDXXXXXXXXXXKEIPPFWHAIFIIMVNDTMV 542
            GERKISVL GIT++FMIHVFGVYWWY+NDD          K+IPPFWHAIF+IMVNDT V
Sbjct: 217  GERKISVLIGITVIFMIHVFGVYWWYRNDDLLRPLFMLPPKDIPPFWHAIFVIMVNDTTV 276

Query: 543  RQAAMVVKCVLLMYYKNSRGRNYRKQGQMXXXXXXXXXXXXXXXXXXXWYRFFLNKEYGS 722
            RQAAM VKC+LL+YYKN RGRNYR+QGQM                   WYRFFLNKEYGS
Sbjct: 277  RQAAMAVKCMLLLYYKNCRGRNYRRQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGS 336

Query: 723  LFSSLTTGLYLTFKLTSVVEKVQSFVTALKALSRKDVHYGSHATTEQVVAAGDLCAICQE 902
            LFSSLTTGLYLTFKLTSVVEKVQSF+ A+KALSRKDVHYGS+AT EQV+AAGD+CAICQE
Sbjct: 337  LFSSLTTGLYLTFKLTSVVEKVQSFLAAVKALSRKDVHYGSYATAEQVLAAGDMCAICQE 396

Query: 903  KMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF 1070
            KMH P+LLRCKHIFCEDCVSEWFERERTCPLCRALVKPAD+RSFGDGSTSLFFQLF
Sbjct: 397  KMHVPVLLRCKHIFCEDCVSEWFERERTCPLCRALVKPADIRSFGDGSTSLFFQLF 452


>ref|NP_001042129.1| Os01g0168400 [Oryza sativa Japonica Group]
            gi|55297508|dbj|BAD68310.1| unknown protein [Oryza sativa
            Japonica Group] gi|113531660|dbj|BAF04043.1| Os01g0168400
            [Oryza sativa Japonica Group]
          Length = 427

 Score =  493 bits (1270), Expect = e-137
 Identities = 240/297 (80%), Positives = 257/297 (86%)
 Frame = +3

Query: 180  SSYQRYDIQQVARWVEQILPFSLLLLVVFIRQHLQGFIGTIWIAAVMFKSNEILRKQTAL 359
            SSYQRYDIQQVARWVEQILPFSLLLLVVFIRQHLQGF  TIWIAAVMFKSN+ILRKQTAL
Sbjct: 131  SSYQRYDIQQVARWVEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNDILRKQTAL 190

Query: 360  KGERKISVLAGITLLFMIHVFGVYWWYKNDDXXXXXXXXXXKEIPPFWHAIFIIMVNDTM 539
            KGERK+SVL GIT+LF++HVFGVYW YKN D          KEIPPFWHAIFII+VNDTM
Sbjct: 191  KGERKMSVLVGITILFVVHVFGVYWCYKNGDLVRPLVALAPKEIPPFWHAIFIILVNDTM 250

Query: 540  VRQAAMVVKCVLLMYYKNSRGRNYRKQGQMXXXXXXXXXXXXXXXXXXXWYRFFLNKEYG 719
            VRQ AM++KC+LLMYYKNS+GR+YR+QGQM                   WYRFFLNKEYG
Sbjct: 251  VRQTAMIIKCMLLMYYKNSKGRSYRRQGQMLTVVEYFLLLYRALLPAPVWYRFFLNKEYG 310

Query: 720  SLFSSLTTGLYLTFKLTSVVEKVQSFVTALKALSRKDVHYGSHATTEQVVAAGDLCAICQ 899
            SLFSSLTTGLYLTFKLTSVVEKVQSF+TAL+ALS KD HYGS+AT+EQV A GD+CAICQ
Sbjct: 311  SLFSSLTTGLYLTFKLTSVVEKVQSFLTALRALSHKDFHYGSYATSEQVSATGDMCAICQ 370

Query: 900  EKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF 1070
            EKMH PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF
Sbjct: 371  EKMHTPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF 427


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