BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003446
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding prot...   122   3e-26
ref|NP_001168324.1| uncharacterized protein LOC100382091 [Zea ma...   109   3e-22
ref|XP_002464324.1| hypothetical protein SORBIDRAFT_01g016170 [S...   108   5e-22
emb|CBI26625.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional ...   107   1e-21

>sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
           Short=Poly(A)-binding protein RBP45; AltName:
           Full=RNA-binding protein 45; Short=NplRBP45
           gi|9663767|emb|CAC01237.1| RNA Binding Protein 45
           [Nicotiana plumbaginifolia]
          Length = 409

 Score =  122 bits (306), Expect = 3e-26
 Identities = 57/73 (78%), Positives = 66/73 (90%)
 Frame = +2

Query: 14  GELISVKIIRNKQTGQSEGYGFLEFVSHAIAEYFLQTYNGQMMLNVDQNYRLNWASLGAG 193
           GEL+S K+IRNKQTGQSEGYGFLEF SHA AE  LQTYNG +M NV+QN+R+NWASLGAG
Sbjct: 108 GELVSAKVIRNKQTGQSEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAG 167

Query: 194 DRRDNSAEYTIFV 232
           +RRD+SAE+TIFV
Sbjct: 168 ERRDDSAEHTIFV 180


>ref|NP_001168324.1| uncharacterized protein LOC100382091 [Zea mays]
           gi|223947441|gb|ACN27804.1| unknown [Zea mays]
           gi|223947469|gb|ACN27818.1| unknown [Zea mays]
           gi|413933766|gb|AFW68317.1| hypothetical protein
           ZEAMMB73_975236, partial [Zea mays]
          Length = 406

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/76 (68%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
 Frame = +2

Query: 8   QNGELISVKIIRNKQTGQSEGYGFLEFVSHAIAEYFLQTYNGQMMLNVDQNYRLNWASLG 187
           Q GE+ISVKIIRNKQTGQ EGYGF+EF +HA+AE  LQ YNGQMM NV+Q ++LNWA+ G
Sbjct: 92  QAGEVISVKIIRNKQTGQPEGYGFIEFSNHAVAEQVLQNYNGQMMPNVNQPFKLNWATSG 151

Query: 188 AGDRR-DNSAEYTIFV 232
           AG++R D+ ++YTIFV
Sbjct: 152 AGEKRGDDGSDYTIFV 167


>ref|XP_002464324.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
           gi|241918178|gb|EER91322.1| hypothetical protein
           SORBIDRAFT_01g016170 [Sorghum bicolor]
          Length = 409

 Score =  108 bits (270), Expect = 5e-22
 Identities = 52/76 (68%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
 Frame = +2

Query: 8   QNGELISVKIIRNKQTGQSEGYGFLEFVSHAIAEYFLQTYNGQMMLNVDQNYRLNWASLG 187
           Q GE+ISVKIIRNKQTGQ EGYGF+EF +HA+AE  LQ YNGQMM NV+Q ++LNWA+ G
Sbjct: 94  QAGEVISVKIIRNKQTGQPEGYGFIEFGNHALAEQVLQNYNGQMMPNVNQPFKLNWATSG 153

Query: 188 AGDRR-DNSAEYTIFV 232
           AG++R D+ ++YTIFV
Sbjct: 154 AGEKRGDDGSDYTIFV 169


>emb|CBI26625.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/76 (65%), Positives = 63/76 (82%), Gaps = 1/76 (1%)
 Frame = +2

Query: 8   QNGELISVKIIRNKQTGQSEGYGFLEFVSHAIAEYFLQTYNGQMMLNVDQNYRLNWASLG 187
           Q GE++SVK+IRNKQTGQ EGYGF+E  + A AE  LQTYNG +M N +QN+RLNWA+LG
Sbjct: 12  QTGEVVSVKVIRNKQTGQCEGYGFIELATRAAAERILQTYNGTLMPNSEQNFRLNWATLG 71

Query: 188 AGDRR-DNSAEYTIFV 232
           AG+RR D++ +YTIFV
Sbjct: 72  AGERRADDTPDYTIFV 87


>ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Vitis vinifera]
          Length = 417

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/76 (65%), Positives = 63/76 (82%), Gaps = 1/76 (1%)
 Frame = +2

Query: 8   QNGELISVKIIRNKQTGQSEGYGFLEFVSHAIAEYFLQTYNGQMMLNVDQNYRLNWASLG 187
           Q GE++SVK+IRNKQTGQ EGYGF+E  + A AE  LQTYNG +M N +QN+RLNWA+LG
Sbjct: 112 QTGEVVSVKVIRNKQTGQCEGYGFIELATRAAAERILQTYNGTLMPNSEQNFRLNWATLG 171

Query: 188 AGDRR-DNSAEYTIFV 232
           AG+RR D++ +YTIFV
Sbjct: 172 AGERRADDTPDYTIFV 187