BLASTX nr result

ID: Dioscorea21_contig00003444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003444
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06617.1| 40S ribosomal protein S8 [Elaeis guineensis]           289   4e-76
ref|XP_003532158.1| PREDICTED: 40S ribosomal protein S8-like [Gl...   285   7e-75
ref|XP_003551567.1| PREDICTED: 40S ribosomal protein S8 [Glycine...   284   9e-75
gb|ACU16398.1| unknown [Glycine max]                                  284   9e-75
ref|NP_001105391.1| 40S ribosomal protein S8 [Zea mays] gi|62267...   284   1e-74

>gb|ACF06617.1| 40S ribosomal protein S8 [Elaeis guineensis]
          Length = 224

 Score =  289 bits (739), Expect = 4e-76
 Identities = 147/194 (75%), Positives = 153/194 (78%)
 Frame = +1

Query: 76  MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 255
           MGISRDSMH                 YELGRQPANTKLSSNKTVRR+RVRGGNVKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 256 LDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 435
           LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAI+QVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFKQWYLQHYGV 120

Query: 436 EVGRKKKAPATSXXXXXXXXXXXXXXXXXXXXSNHVLRKLEKRQEGRTLDPHIEEQFGGG 615
           E+GRKKKAPA +                    SNHVLRKLEKRQ+GR LDPHIEEQFG G
Sbjct: 121 EIGRKKKAPAAT-KKEATEGQEGEGATEEPKKSNHVLRKLEKRQQGRKLDPHIEEQFGSG 179

Query: 616 RLFACISSRPGQCG 657
           RL ACISSRPGQCG
Sbjct: 180 RLLACISSRPGQCG 193


>ref|XP_003532158.1| PREDICTED: 40S ribosomal protein S8-like [Glycine max]
          Length = 219

 Score =  285 bits (728), Expect = 7e-75
 Identities = 147/194 (75%), Positives = 152/194 (78%)
 Frame = +1

Query: 76  MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 255
           MGISRDSMH                 YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKSWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 256 LDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 435
           LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 436 EVGRKKKAPATSXXXXXXXXXXXXXXXXXXXXSNHVLRKLEKRQEGRTLDPHIEEQFGGG 615
           EVGRKKK+ A S                    SNHV+RKLEKR++ R LDPHIEEQFGGG
Sbjct: 121 EVGRKKKSAAAS---VKKEGEDGEAATEEVKKSNHVVRKLEKRKQNRVLDPHIEEQFGGG 177

Query: 616 RLFACISSRPGQCG 657
           RL ACISSRPGQCG
Sbjct: 178 RLLACISSRPGQCG 191


>ref|XP_003551567.1| PREDICTED: 40S ribosomal protein S8 [Glycine max]
          Length = 219

 Score =  284 bits (727), Expect = 9e-75
 Identities = 147/194 (75%), Positives = 151/194 (77%)
 Frame = +1

Query: 76  MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 255
           MGISRDSMH                 YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 256 LDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 435
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAATRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 436 EVGRKKKAPATSXXXXXXXXXXXXXXXXXXXXSNHVLRKLEKRQEGRTLDPHIEEQFGGG 615
           EVGRKKK+ A S                    SNHVLRKLEKR++ R LDPHIEEQFGGG
Sbjct: 121 EVGRKKKSAAAS---AKKEGEDGEAATEEVKKSNHVLRKLEKRKQNRVLDPHIEEQFGGG 177

Query: 616 RLFACISSRPGQCG 657
           RL ACISSRPGQCG
Sbjct: 178 RLLACISSRPGQCG 191


>gb|ACU16398.1| unknown [Glycine max]
          Length = 256

 Score =  284 bits (727), Expect = 9e-75
 Identities = 147/194 (75%), Positives = 151/194 (77%)
 Frame = +1

Query: 76  MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 255
           MGISRDSMH                 YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 256 LDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 435
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAATRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 436 EVGRKKKAPATSXXXXXXXXXXXXXXXXXXXXSNHVLRKLEKRQEGRTLDPHIEEQFGGG 615
           EVGRKKK+ A S                    SNHVLRKLEKR++ R LDPHIEEQFGGG
Sbjct: 121 EVGRKKKSAAAS---AKKEGEDGEAATEEVKKSNHVLRKLEKRKQNRVLDPHIEEQFGGG 177

Query: 616 RLFACISSRPGQCG 657
           RL ACISSRPGQCG
Sbjct: 178 RLLACISSRPGQCG 191


>ref|NP_001105391.1| 40S ribosomal protein S8 [Zea mays]
           gi|6226702|sp|Q08069.2|RS8_MAIZE RecName: Full=40S
           ribosomal protein S8 gi|1498053|gb|AAB06330.1| ribosomal
           protein S8 [Zea mays] gi|194692698|gb|ACF80433.1|
           unknown [Zea mays] gi|195605614|gb|ACG24637.1| 40S
           ribosomal protein S8 [Zea mays]
           gi|413926193|gb|AFW66125.1| putative ribosomal protein
           S8e family protein [Zea mays]
           gi|413926197|gb|AFW66129.1| putative ribosomal protein
           S8e family protein [Zea mays]
           gi|413926198|gb|AFW66130.1| putative ribosomal protein
           S8e family protein [Zea mays]
           gi|413926206|gb|AFW66138.1| putative ribosomal protein
           S8e family protein [Zea mays]
           gi|413926210|gb|AFW66142.1| putative ribosomal protein
           S8e family protein [Zea mays]
          Length = 221

 Score =  284 bits (726), Expect = 1e-74
 Identities = 145/194 (74%), Positives = 150/194 (77%)
 Frame = +1

Query: 76  MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 255
           MGISRDSMH                 YELGRQPANTKLSSNKTVRR+RVRGGNVKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 256 LDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 435
           LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 436 EVGRKKKAPATSXXXXXXXXXXXXXXXXXXXXSNHVLRKLEKRQEGRTLDPHIEEQFGGG 615
           ++GRKKK PA                      SNHV RKLEKR+EGRTLDPHIEEQFG G
Sbjct: 121 DIGRKKKTPAAK--KDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSG 178

Query: 616 RLFACISSRPGQCG 657
           RL ACISSRPGQCG
Sbjct: 179 RLLACISSRPGQCG 192


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