BLASTX nr result

ID: Dioscorea21_contig00003428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003428
         (1389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [...   481   e-133
ref|XP_002269842.1| PREDICTED: WD repeat-containing protein 55 [...   479   e-133
ref|XP_003535974.1| PREDICTED: WD repeat-containing protein 55-l...   470   e-130
ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula] g...   467   e-129
gb|AFK42119.1| unknown [Medicago truncatula] gi|388510080|gb|AFK...   464   e-128

>ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [Vitis vinifera]
            gi|297743547|emb|CBI36414.3| unnamed protein product
            [Vitis vinifera]
          Length = 346

 Score =  481 bits (1238), Expect = e-133
 Identities = 241/356 (67%), Positives = 289/356 (81%), Gaps = 2/356 (0%)
 Frame = +1

Query: 49   MEINLGKLPFDLDFHPSSPLVATGLINGDVHLYKYSSDSIPQKLLGIHAH-DESCRAVRF 225
            MEINLGKLPFD+DFHPS+ LVA GLINGD+HLY+Y ++S+PQ+LL +HAH DESCRAVRF
Sbjct: 1    MEINLGKLPFDIDFHPSNTLVAAGLINGDLHLYRYGANSLPQRLLEVHAHGDESCRAVRF 60

Query: 226  VDSGRVFLTGSPDCSILALDVETGAQIARFKDAHEAAVNRLVNLTETTIASGDDDGCIKV 405
            ++ G   +TGSPD SILA DVETG+ IAR + +H AA+NRL+NLTETTIASGDD+GCIKV
Sbjct: 61   INEGHAIVTGSPDLSILATDVETGSAIARLEHSHGAAINRLINLTETTIASGDDEGCIKV 120

Query: 406  WDTRQRACCNSFKAHEDFISDMTFASGSMQLIGTSGDGTLSVCNLRRKKVQAQSEFSEDE 585
            WDTRQ++CCNSF +HE++ISDMTFAS SM+L+G SGDGTLSVCNLRR KVQ QSEFSEDE
Sbjct: 121  WDTRQQSCCNSFDSHEEYISDMTFASDSMKLLGVSGDGTLSVCNLRRNKVQVQSEFSEDE 180

Query: 586  LLSVVIMKHGRKVICGTQTGALLLYSWGHFKDCSDRFLG-HPMSVDTLVKLDEDSLISGS 762
            LLSVVIMK+GRKVICGTQ+GALLLYSWGHFKDCSDRF+   P SVD L+KLDED +I+GS
Sbjct: 181  LLSVVIMKNGRKVICGTQSGALLLYSWGHFKDCSDRFIDLSPNSVDALLKLDEDRVITGS 240

Query: 763  EDGVIRLVSILPNRIVQPIAEHSEYPIEGLAFSNDRKYLGSISHDQMLKIWDLEEVLDGN 942
            E+G+I LV ILPNRI+QPIAEHSEYP+E LAFS DRKYLGSISHDQMLK+WDL+++L G+
Sbjct: 241  ENGLISLVGILPNRIIQPIAEHSEYPVERLAFSFDRKYLGSISHDQMLKLWDLDDLLQGS 300

Query: 943  QAVQNNLAAEAESXXXXXXXXXXXXXXXXXXXXLKGRKGDNKQASSMKAANFFADL 1110
             +   +  A A+S                     K +   N QA +  +++FFADL
Sbjct: 301  GSTLRSQEAMADS---------DSDEMDVDAKETKRKTASNGQALN-SSSSFFADL 346


>ref|XP_002269842.1| PREDICTED: WD repeat-containing protein 55 [Vitis vinifera]
            gi|298205166|emb|CBI17225.3| unnamed protein product
            [Vitis vinifera]
          Length = 346

 Score =  479 bits (1233), Expect = e-133
 Identities = 240/356 (67%), Positives = 290/356 (81%), Gaps = 2/356 (0%)
 Frame = +1

Query: 49   MEINLGKLPFDLDFHPSSPLVATGLINGDVHLYKYSSDSIPQKLLGIHAH-DESCRAVRF 225
            MEINLGKLPFD+DFHPS+ LVA GLINGD+HLY+Y ++S+PQ+LL +HAH +ESCRAVRF
Sbjct: 1    MEINLGKLPFDIDFHPSNTLVAAGLINGDLHLYRYGANSLPQRLLEVHAHGEESCRAVRF 60

Query: 226  VDSGRVFLTGSPDCSILALDVETGAQIARFKDAHEAAVNRLVNLTETTIASGDDDGCIKV 405
            ++ G   +TGSPD SILA DVETG+ IAR + +H AA++RL+NLTETTIASGDD+GCIKV
Sbjct: 61   INKGHAIVTGSPDRSILATDVETGSAIARLEHSHGAAISRLINLTETTIASGDDEGCIKV 120

Query: 406  WDTRQRACCNSFKAHEDFISDMTFASGSMQLIGTSGDGTLSVCNLRRKKVQAQSEFSEDE 585
            WDTRQ++CCNSF AHE++ISDMTFAS SM+L+G SGDGTLSVCNLRR KVQ QSEFSEDE
Sbjct: 121  WDTRQQSCCNSFDAHEEYISDMTFASDSMKLLGVSGDGTLSVCNLRRNKVQVQSEFSEDE 180

Query: 586  LLSVVIMKHGRKVICGTQTGALLLYSWGHFKDCSDRFLG-HPMSVDTLVKLDEDSLISGS 762
            LLSVV+MK+GRKVICGTQ+GALLLYSWGHFKDCSDRF+   P SVD L+KLDEDS+I+GS
Sbjct: 181  LLSVVLMKNGRKVICGTQSGALLLYSWGHFKDCSDRFIDLSPNSVDALLKLDEDSVITGS 240

Query: 763  EDGVIRLVSILPNRIVQPIAEHSEYPIEGLAFSNDRKYLGSISHDQMLKIWDLEEVLDGN 942
            E+G+I LV ILPNRI+QPIAEHSEYP+E LAFS DRKYLGSISHDQMLK+WDL+++L G+
Sbjct: 241  ENGLISLVGILPNRIIQPIAEHSEYPVERLAFSFDRKYLGSISHDQMLKLWDLDDLLQGS 300

Query: 943  QAVQNNLAAEAESXXXXXXXXXXXXXXXXXXXXLKGRKGDNKQASSMKAANFFADL 1110
             +   +  A A+S                     K +   N QA +  +++FFADL
Sbjct: 301  GSTLRSREAMADS---------DSDEMDVDAKETKRKTASNGQALN-SSSSFFADL 346


>ref|XP_003535974.1| PREDICTED: WD repeat-containing protein 55-like [Glycine max]
          Length = 352

 Score =  470 bits (1210), Expect = e-130
 Identities = 230/355 (64%), Positives = 274/355 (77%), Gaps = 1/355 (0%)
 Frame = +1

Query: 49   MEINLGKLPFDLDFHPSSPLVATGLINGDVHLYKYSSDSIPQKLLGIHAHDESCRAVRFV 228
            MEI+LGKL FD+DFHPS  LVA GLI GD+HLY+Y+ DS P ++L +HAH ESCRA RF+
Sbjct: 1    MEISLGKLAFDIDFHPSDNLVAAGLITGDLHLYRYTPDSTPVRMLEVHAHTESCRAARFI 60

Query: 229  DSGRVFLTGSPDCSILALDVETGAQIARFKDAHEAAVNRLVNLTETTIASGDDDGCIKVW 408
            + GR  LTGSPDCSILA DVETG+ IAR  DAHEAAVNRL+NLTE+T+ASGDD+GCIKVW
Sbjct: 61   NGGRAILTGSPDCSILATDVETGSTIARLDDAHEAAVNRLINLTESTVASGDDEGCIKVW 120

Query: 409  DTRQRACCNSFKAHEDFISDMTFASGSMQLIGTSGDGTLSVCNLRRKKVQAQSEFSEDEL 588
            DTR+R+CCNSF AHED+ISDMTF S +M+L+ TSGDGTLSVCNLRR KVQAQSEFSEDEL
Sbjct: 121  DTRERSCCNSFNAHEDYISDMTFVSDAMKLLATSGDGTLSVCNLRRNKVQAQSEFSEDEL 180

Query: 589  LSVVIMKHGRKVICGTQTGALLLYSWGHFKDCSDRFLG-HPMSVDTLVKLDEDSLISGSE 765
            LSVV+MK+GRKV+CG+QTG +LLYSWG FKDCSDRF      S+D ++KLDED +I+GSE
Sbjct: 181  LSVVLMKNGRKVVCGSQTGVILLYSWGCFKDCSDRFTDLSSNSIDAMLKLDEDRIITGSE 240

Query: 766  DGVIRLVSILPNRIVQPIAEHSEYPIEGLAFSNDRKYLGSISHDQMLKIWDLEEVLDGNQ 945
            +G+I LV ILPNR++QPIAEHSEYP+E LAFS+D+K+LGSI+HDQMLK+WDL+ +L G+ 
Sbjct: 241  NGIINLVGILPNRVIQPIAEHSEYPVECLAFSHDKKFLGSIAHDQMLKLWDLDNILQGSG 300

Query: 946  AVQNNLAAEAESXXXXXXXXXXXXXXXXXXXXLKGRKGDNKQASSMKAANFFADL 1110
              Q N A  A                       K     N    S    NFFADL
Sbjct: 301  NTQRNEAGGAVDSDDDEMDLDDDPSKINKGNKRKNANNGNALGGS---NNFFADL 352


>ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula]
           gi|355510141|gb|AES91283.1| WD-40 repeat protein
           [Medicago truncatula]
          Length = 420

 Score =  467 bits (1201), Expect = e-129
 Identities = 223/308 (72%), Positives = 270/308 (87%), Gaps = 4/308 (1%)
 Frame = +1

Query: 49  MEINLGKLPFDLDFHPSSPLVATGLINGDVHLYKYSSD---SIPQKLLGIHAHDESCRAV 219
           MEINLGKL FD+DFHPS  LVA+GLI+GD+HLY+YSSD   S P ++L +HAH ESCRA 
Sbjct: 62  MEINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAA 121

Query: 220 RFVDSGRVFLTGSPDCSILALDVETGAQIARFKDAHEAAVNRLVNLTETTIASGDDDGCI 399
           RF++ GR  LTGSPD SILA DVETG+ IAR  +AHEAAVNRL+NLTE+T+ASGDDDGCI
Sbjct: 122 RFINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCI 181

Query: 400 KVWDTRQRACCNSFKAHEDFISDMTFASGSMQLIGTSGDGTLSVCNLRRKKVQAQSEFSE 579
           KVWDTR+R+CCNSF+AHED+ISD+TFAS +M+++ TSGDGTLSVCNLRR KVQAQSEFSE
Sbjct: 182 KVWDTRERSCCNSFEAHEDYISDITFASDAMKILATSGDGTLSVCNLRRNKVQAQSEFSE 241

Query: 580 DELLSVVIMKHGRKVICGTQTGALLLYSWGHFKDCSDRFLG-HPMSVDTLVKLDEDSLIS 756
           DELLSVV+MK+GRKV+CG+QTG LLLYSWG FKDCSDRF+     S+DT++KLDED +I+
Sbjct: 242 DELLSVVLMKNGRKVVCGSQTGILLLYSWGCFKDCSDRFVDLASNSIDTMLKLDEDRIIT 301

Query: 757 GSEDGVIRLVSILPNRIVQPIAEHSEYPIEGLAFSNDRKYLGSISHDQMLKIWDLEEVLD 936
           GSE+G+I LV ILPNRI++PIAEHSEYP+E LAFS+DRK+LGSI HDQMLK+WDL+ +L 
Sbjct: 302 GSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLDNILQ 361

Query: 937 GNQAVQNN 960
           G+++ Q N
Sbjct: 362 GSRSTQRN 369


>gb|AFK42119.1| unknown [Medicago truncatula] gi|388510080|gb|AFK43106.1| unknown
           [Medicago truncatula]
          Length = 359

 Score =  464 bits (1194), Expect = e-128
 Identities = 222/308 (72%), Positives = 269/308 (87%), Gaps = 4/308 (1%)
 Frame = +1

Query: 49  MEINLGKLPFDLDFHPSSPLVATGLINGDVHLYKYSSD---SIPQKLLGIHAHDESCRAV 219
           MEINLGKL FD+DFHPS  LVA+GLI+GD+HLY+YSSD   S P ++L +HAH ESCRA 
Sbjct: 1   MEINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAA 60

Query: 220 RFVDSGRVFLTGSPDCSILALDVETGAQIARFKDAHEAAVNRLVNLTETTIASGDDDGCI 399
           RF++ GR  LTGSPD SILA DVETG+ IAR  +AHEAAVNRL+NLTE+T+ASGDDDGCI
Sbjct: 61  RFINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCI 120

Query: 400 KVWDTRQRACCNSFKAHEDFISDMTFASGSMQLIGTSGDGTLSVCNLRRKKVQAQSEFSE 579
           KVWDTR+R+CCNSF+AHED+ISD+TFAS +M+++ TSGDGTLSVCNLRR KVQAQSEFSE
Sbjct: 121 KVWDTRERSCCNSFEAHEDYISDITFASDAMKILATSGDGTLSVCNLRRNKVQAQSEFSE 180

Query: 580 DELLSVVIMKHGRKVICGTQTGALLLYSWGHFKDCSDRFLG-HPMSVDTLVKLDEDSLIS 756
           DELLSVV+MK+GRKV+CG+QTG LLLYSWG FKDCSDRF+     S+DT++KLDE  +I+
Sbjct: 181 DELLSVVLMKNGRKVVCGSQTGILLLYSWGCFKDCSDRFVDLASNSIDTMLKLDEGRIIT 240

Query: 757 GSEDGVIRLVSILPNRIVQPIAEHSEYPIEGLAFSNDRKYLGSISHDQMLKIWDLEEVLD 936
           GSE+G+I LV ILPNRI++PIAEHSEYP+E LAFS+DRK+LGSI HDQMLK+WDL+ +L 
Sbjct: 241 GSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLDNILQ 300

Query: 937 GNQAVQNN 960
           G+++ Q N
Sbjct: 301 GSRSTQRN 308


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