BLASTX nr result

ID: Dioscorea21_contig00003395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003395
         (2112 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guin...   134   1e-28
ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263...   125   6e-26
emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]   123   2e-25
ref|XP_002307818.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-24
ref|XP_002510726.1| DNA binding protein, putative [Ricinus commu...   120   2e-24

>gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guineensis]
          Length = 362

 Score =  134 bits (337), Expect = 1e-28
 Identities = 75/117 (64%), Positives = 78/117 (66%), Gaps = 2/117 (1%)
 Frame = +2

Query: 1490 GGQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXXSPVQVVVGSFIVDGRKEPKHRNYSDHA 1669
            GGQRSRTGGLSVS                    SPVQVVVGSFI DG+KEPKH   SD  
Sbjct: 246  GGQRSRTGGLSVSLAGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGKKEPKHTAPSDPT 305

Query: 1670 SAPGKVTAGGMVA-PGSPLSRGTQSESSGG-PGSPLNQSTGACNNNNQLGLSAMPWK 1834
             APGK+ AGG  A   SP SRGT SESSGG PGSPLNQSTG CNN+NQ GLS MPWK
Sbjct: 306  LAPGKLAAGGAAAGANSPPSRGTLSESSGGGPGSPLNQSTGTCNNSNQQGLSNMPWK 362



 Score =  130 bits (326), Expect = 2e-27
 Identities = 85/205 (41%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
 Frame = +3

Query: 768  MEVRSETGLMASREPFTVAMQKSPVQSPPSMQNMRLVFTADGQAVYK---XXXXXXXXXX 938
            MEVRSE G+M+ RE F V MQKSPVQS PSMQ+MRL F  DG A+YK             
Sbjct: 1    MEVRSEPGIMSGRESFNVGMQKSPVQSQPSMQSMRLAFAPDGTAIYKPITTSSPPPPPYQ 60

Query: 939  XXXXXXXXXXXXVHSPAVAPPHGLNVNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1118
                          SPA   PHGLN+N+                                
Sbjct: 61   GGGGAGSTGGGDGPSPAAITPHGLNINVGEPVKRKRGRPRKYGPDGTMSLALTTVSPTAA 120

Query: 1119 XXXXXXVGXXXXXXXDPSKKSRGRP----------------PGSGKKQQMTALGSTGLGF 1250
                            PS    G P                PGSGKKQQ+ ALGS G+GF
Sbjct: 121  V-------SPGSGGFSPSSAGAGNPASSASAEAMKKARGRPPGSGKKQQLAALGSAGIGF 173

Query: 1251 TPHVINVKAGEDVSSKIMSFSQHGP 1325
            TPHVI VKAGEDVSSKIMSFSQHGP
Sbjct: 174  TPHVITVKAGEDVSSKIMSFSQHGP 198


>ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263332 [Vitis vinifera]
            gi|297745600|emb|CBI40765.3| unnamed protein product
            [Vitis vinifera]
          Length = 353

 Score =  125 bits (313), Expect = 6e-26
 Identities = 67/119 (56%), Positives = 77/119 (64%), Gaps = 4/119 (3%)
 Frame = +2

Query: 1490 GGQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXXSPVQVVVGSFIVDGRKEPKHRNYSDHA 1669
            GGQRSRTGGLSVS                    SPVQVVVGSFI DGRKE K  +  + +
Sbjct: 235  GGQRSRTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGRKESKSASQVEPS 294

Query: 1670 SAPGKVT----AGGMVAPGSPLSRGTQSESSGGPGSPLNQSTGACNNNNQLGLSAMPWK 1834
            SAP K+      GG+    SP SRGT SESSGGPGSPLNQSTGACNN+N  G++++PWK
Sbjct: 295  SAPPKIAPVGGGGGVTGTSSPPSRGTLSESSGGPGSPLNQSTGACNNSNPPGMTSIPWK 353



 Score =  116 bits (291), Expect = 2e-23
 Identities = 76/188 (40%), Positives = 88/188 (46%), Gaps = 6/188 (3%)
 Frame = +3

Query: 780  SETGLMASREPFTVAMQKSPVQSPPSMQNMRLVFTADGQAVYKXXXXXXXXXXXXXXXXX 959
            SETG+M +REPF++ +QK+ V S P +QNMRL F+ DG AVYK                 
Sbjct: 4    SETGIMTTREPFSMGLQKNAVPSQPVIQNMRLAFSPDGAAVYKPVSGTSPPYQSSGGTGG 63

Query: 960  XXXXXVHSPAVAPPHGLNVNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 1139
                   +     PHGLN+NM                                       
Sbjct: 64   DG----STGGAIIPHGLNMNMGSEPLKRKRGRPRKYGPDGTMALALSPAPSGVNVSQSGG 119

Query: 1140 G----XXXXXXXDPSKKSRGR--PPGSGKKQQMTALGSTGLGFTPHVINVKAGEDVSSKI 1301
                         PS   + R  PPGS KKQQM ALGS G+GFTPHVI VKAGEDVSSKI
Sbjct: 120  AFSSPPASAGSASPSSLKKARGRPPGSSKKQQMEALGSAGVGFTPHVITVKAGEDVSSKI 179

Query: 1302 MSFSQHGP 1325
            MSFSQHGP
Sbjct: 180  MSFSQHGP 187


>emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]
          Length = 390

 Score =  123 bits (308), Expect = 2e-25
 Identities = 66/118 (55%), Positives = 76/118 (64%), Gaps = 4/118 (3%)
 Frame = +2

Query: 1490 GGQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXXSPVQVVVGSFIVDGRKEPKHRNYSDHA 1669
            GGQRSRTGGLSVS                    SPVQVVVGSFI DGRKE K  +  + +
Sbjct: 235  GGQRSRTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGRKESKSASQVEPS 294

Query: 1670 SAPGKVT----AGGMVAPGSPLSRGTQSESSGGPGSPLNQSTGACNNNNQLGLSAMPW 1831
            SAP K+      GG+    SP SRGT SESSGGPGSPLNQSTGACNN+N  G++++PW
Sbjct: 295  SAPPKIAPVGGGGGVTGTSSPPSRGTLSESSGGPGSPLNQSTGACNNSNPPGMTSIPW 352



 Score =  116 bits (291), Expect = 2e-23
 Identities = 76/188 (40%), Positives = 88/188 (46%), Gaps = 6/188 (3%)
 Frame = +3

Query: 780  SETGLMASREPFTVAMQKSPVQSPPSMQNMRLVFTADGQAVYKXXXXXXXXXXXXXXXXX 959
            SETG+M +REPF++ +QK+ V S P +QNMRL F+ DG AVYK                 
Sbjct: 4    SETGIMTTREPFSMGLQKNAVPSQPVIQNMRLAFSPDGAAVYKPVSGTSPPYQSSGGTGG 63

Query: 960  XXXXXVHSPAVAPPHGLNVNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 1139
                   +     PHGLN+NM                                       
Sbjct: 64   DG----STGGAIIPHGLNMNMGSEPLKRKRGRPRKYGPDGTMALALSPAPSGVNVSQSGG 119

Query: 1140 G----XXXXXXXDPSKKSRGR--PPGSGKKQQMTALGSTGLGFTPHVINVKAGEDVSSKI 1301
                         PS   + R  PPGS KKQQM ALGS G+GFTPHVI VKAGEDVSSKI
Sbjct: 120  AFSSPPASAGSASPSSLKKARGRPPGSSKKQQMEALGSAGVGFTPHVITVKAGEDVSSKI 179

Query: 1302 MSFSQHGP 1325
            MSFSQHGP
Sbjct: 180  MSFSQHGP 187


>ref|XP_002307818.1| predicted protein [Populus trichocarpa] gi|222857267|gb|EEE94814.1|
            predicted protein [Populus trichocarpa]
          Length = 272

 Score =  120 bits (302), Expect = 1e-24
 Identities = 64/116 (55%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
 Frame = +2

Query: 1490 GGQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXXSPVQVVVGSFIVDGRKEPKHRNYSDHA 1669
            GGQRSR+GGLSV                     +PVQVVVGSFI DGRKE K  N+++ +
Sbjct: 157  GGQRSRSGGLSVCLSGPDGRVLGGTVAGLLVAAAPVQVVVGSFIADGRKESKTANHTEPS 216

Query: 1670 SAPGKVTA-GGMVAPGSPLSRGTQSESSGGPGSPLNQSTGACNNNNQLGLSAMPWK 1834
            SA  ++   GG     SP SRGT SESSGGPGSPLNQSTGACNN+N  G+S+MPW+
Sbjct: 217  SATSRLPPRGGSTGVSSPPSRGTLSESSGGPGSPLNQSTGACNNSNPQGMSSMPWE 272



 Score = 93.6 bits (231), Expect = 2e-16
 Identities = 42/51 (82%), Positives = 46/51 (90%)
 Frame = +3

Query: 1173 KKSRGRPPGSGKKQQMTALGSTGLGFTPHVINVKAGEDVSSKIMSFSQHGP 1325
            KK+RGRPPGS KKQQ+ ALGS G GFTPHVI VKAGED+SSK+MSFSQHGP
Sbjct: 59   KKARGRPPGSSKKQQLNALGSAGFGFTPHVITVKAGEDISSKVMSFSQHGP 109


>ref|XP_002510726.1| DNA binding protein, putative [Ricinus communis]
            gi|223551427|gb|EEF52913.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 374

 Score =  120 bits (300), Expect = 2e-24
 Identities = 67/116 (57%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
 Frame = +2

Query: 1490 GGQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXXSPVQVVVGSFIVDGRKEPKHRNYSDHA 1669
            GGQRSRTGGLSVS                    SPVQVVV SFI D RKE K  N+ +  
Sbjct: 259  GGQRSRTGGLSVSLSGPDGRVLGGGVAGLLLAASPVQVVVASFISDDRKELKSPNHLEPL 318

Query: 1670 SAPGKVT-AGGMVAPGSPLSRGTQSESSGGPGSPLNQSTGACNNNNQLGLSAMPWK 1834
            SA  ++T   G   P SP SRGT SESSGGPGSPLNQSTGACNN+N  G+S+MPWK
Sbjct: 319  SAMNRLTPVMGTTGPSSPPSRGTFSESSGGPGSPLNQSTGACNNSNLQGISSMPWK 374



 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 43/51 (84%), Positives = 45/51 (88%)
 Frame = +3

Query: 1173 KKSRGRPPGSGKKQQMTALGSTGLGFTPHVINVKAGEDVSSKIMSFSQHGP 1325
            KK RGRPPGS KKQQ+ ALGS G GFTPH+I VKAGEDVSSKIMSFSQHGP
Sbjct: 161  KKGRGRPPGSNKKQQLEALGSAGFGFTPHIITVKAGEDVSSKIMSFSQHGP 211


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