BLASTX nr result

ID: Dioscorea21_contig00003394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003394
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306478.1| predicted protein [Populus trichocarpa] gi|2...   318   7e-85
ref|XP_002282881.1| PREDICTED: F-box protein At5g67140 [Vitis vi...   308   9e-82
ref|XP_004149695.1| PREDICTED: F-box protein At5g67140-like [Cuc...   306   4e-81
ref|XP_002523621.1| ubiquitin-protein ligase, putative [Ricinus ...   298   7e-79
ref|XP_002865025.1| F-box family protein [Arabidopsis lyrata sub...   286   5e-75

>ref|XP_002306478.1| predicted protein [Populus trichocarpa] gi|222855927|gb|EEE93474.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  318 bits (816), Expect = 7e-85
 Identities = 150/214 (70%), Positives = 182/214 (85%)
 Frame = -3

Query: 799 KEEEPEIERLPVDILAFIFSLIPSFSELAQASAVCRKWKRGVEQSLAQRERLSLSGFSVD 620
           + EE EI+RLP+D++A+IF  I SF++LAQAS+VCRKWK GV+QSLAQR  +S +G+ +D
Sbjct: 2   EREEAEIDRLPIDLVAYIFGFIVSFTDLAQASSVCRKWKEGVKQSLAQRNSMSFAGWKMD 61

Query: 619 DDIAARIVRGAYGLKELDISRSCWRCKITDEGLYKISLAKCVGNLTSISMWGMARITDKG 440
           D    R+VR AY LKELDISRS W C+ITD GLY+ISLA C+GNLTSIS+WGMARITD+G
Sbjct: 62  DVSTTRLVRLAYNLKELDISRSRWDCQITDNGLYQISLANCIGNLTSISLWGMARITDRG 121

Query: 439 VIPLVSEATSLRHLNVGGTFITDESLFAIANSCPHLKAIVLWSCRHVTETGLIMLVNKCR 260
           V+ L+S A SL+HLN+GGTF+TDESLFAIA+SCP LK+IVLWSCRHVTE GL+ L NKCR
Sbjct: 122 VVQLISRANSLQHLNIGGTFVTDESLFAIADSCPRLKSIVLWSCRHVTEIGLLNLANKCR 181

Query: 259 KLESINVWGMRVPRNFFLDLIAISPALQIKPPSL 158
           KLESINVWG RVP N F+DL+ ISP+LQIKPP +
Sbjct: 182 KLESINVWGTRVPVNCFIDLLTISPSLQIKPPGV 215


>ref|XP_002282881.1| PREDICTED: F-box protein At5g67140 [Vitis vinifera]
           gi|296082395|emb|CBI21400.3| unnamed protein product
           [Vitis vinifera]
          Length = 232

 Score =  308 bits (789), Expect = 9e-82
 Identities = 152/224 (67%), Positives = 184/224 (82%), Gaps = 2/224 (0%)
 Frame = -3

Query: 793 EEPEIERLPVDILAFIFSLIPSFSELAQASAVCRKWKRGVEQSLAQRERLSLSGFSVDDD 614
           EE EIERLP+D+LA IF ++ SF++LAQAS+VCRKWK+GV+QSL +RE LS +G+ +DDD
Sbjct: 8   EEAEIERLPMDLLANIFVMLTSFTDLAQASSVCRKWKQGVKQSLGRRESLSFAGWQMDDD 67

Query: 613 IAARIVRGAYGLKELDISRSCWRCKITDEGLYKISLAKCVGNLTSISMWGMARITDKGVI 434
             AR++R AYGLKELDISRS W C++TD GLYKISLAKCV  LTSIS+WG+  ITD GV+
Sbjct: 68  SIARLLRHAYGLKELDISRSRWGCQVTDNGLYKISLAKCVNKLTSISLWGVTGITDSGVV 127

Query: 433 PLVSEATSLRHLNVGGTFITDESLFAIANSCPHLKAIVLWSCRHVTETGLIMLVNKCRKL 254
            L+S A SL+HLN+GGTFITDESLFAIA SCP LK IVLWSCRHVTE GL++LV+KCRKL
Sbjct: 128 QLISRAISLQHLNIGGTFITDESLFAIAESCPCLKTIVLWSCRHVTENGLLVLVSKCRKL 187

Query: 253 ESINVWGMRVPRNFFLDLIAISPALQIKPPS--LHPKIVRMWSI 128
           +SINVWG RVP + F  L+AI PALQIKP    L+ + V MW +
Sbjct: 188 QSINVWGTRVPVDCFFALLAIRPALQIKPGRLLLNVERVSMWPV 231


>ref|XP_004149695.1| PREDICTED: F-box protein At5g67140-like [Cucumis sativus]
           gi|449508293|ref|XP_004163274.1| PREDICTED: F-box
           protein At5g67140-like [Cucumis sativus]
          Length = 235

 Score =  306 bits (783), Expect = 4e-81
 Identities = 148/223 (66%), Positives = 186/223 (83%)
 Frame = -3

Query: 796 EEEPEIERLPVDILAFIFSLIPSFSELAQASAVCRKWKRGVEQSLAQRERLSLSGFSVDD 617
           E EPEI+RLP+D+LA IF++I SF++LAQA  VCRKWK GV+ SL +R+ LS +G+ +DD
Sbjct: 15  ELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRKSLSFAGWKMDD 74

Query: 616 DIAARIVRGAYGLKELDISRSCWRCKITDEGLYKISLAKCVGNLTSISMWGMARITDKGV 437
           +  AR++R AY L+ELDISRS W C ITD GLY+ISLAKC+ NL SIS+WGMA ITDKGV
Sbjct: 75  NSTARLIRHAYSLRELDISRSRWGCHITDHGLYEISLAKCIPNLKSISLWGMAGITDKGV 134

Query: 436 IPLVSEATSLRHLNVGGTFITDESLFAIANSCPHLKAIVLWSCRHVTETGLIMLVNKCRK 257
           + L+S A SL++LN+GGTF+TD SL+AIA+SCP+LK IVLWSCRHVTETGL++LV+KCRK
Sbjct: 135 VQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTETGLLILVSKCRK 194

Query: 256 LESINVWGMRVPRNFFLDLIAISPALQIKPPSLHPKIVRMWSI 128
           LESINVWGMRVP + F+ L+AISP+LQIK  SL   +  MWS+
Sbjct: 195 LESINVWGMRVPVDCFIGLVAISPSLQIKSRSL---LNSMWSV 234


>ref|XP_002523621.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223537183|gb|EEF38816.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 227

 Score =  298 bits (764), Expect = 7e-79
 Identities = 147/209 (70%), Positives = 172/209 (82%)
 Frame = -3

Query: 796 EEEPEIERLPVDILAFIFSLIPSFSELAQASAVCRKWKRGVEQSLAQRERLSLSGFSVDD 617
           EE  EI+RLP+D+LA IF LI SF++LA AS+VCRKWK GV++SL +R  LS +G  +DD
Sbjct: 2   EEGTEIDRLPIDLLAHIFVLINSFTDLAHASSVCRKWKEGVKRSLGRRNSLSFAGLKMDD 61

Query: 616 DIAARIVRGAYGLKELDISRSCWRCKITDEGLYKISLAKCVGNLTSISMWGMARITDKGV 437
              AR+VR AY LKELDISRS W C+ITD GLY+ISLAKC+ NLTSIS+WGM  ITDKGV
Sbjct: 62  HSTARVVRYAYSLKELDISRSRWGCQITDNGLYEISLAKCISNLTSISLWGMTGITDKGV 121

Query: 436 IPLVSEATSLRHLNVGGTFITDESLFAIANSCPHLKAIVLWSCRHVTETGLIMLVNKCRK 257
           + L+S A SL+HLNVGGTFITDESL AIA+SCPHLK+I LWSCRHVTE GLI LVNKCRK
Sbjct: 122 VQLMSRANSLQHLNVGGTFITDESLCAIADSCPHLKSIGLWSCRHVTEIGLIYLVNKCRK 181

Query: 256 LESINVWGMRVPRNFFLDLIAISPALQIK 170
           LESIN WG RVP + FL L+ +SPAL+IK
Sbjct: 182 LESINAWGTRVPIDCFLCLLTVSPALRIK 210


>ref|XP_002865025.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310860|gb|EFH41284.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 228

 Score =  286 bits (731), Expect = 5e-75
 Identities = 135/213 (63%), Positives = 169/213 (79%)
 Frame = -3

Query: 796 EEEPEIERLPVDILAFIFSLIPSFSELAQASAVCRKWKRGVEQSLAQRERLSLSGFSVDD 617
           +EE  I+RLP+D+LA+IFSL+ SF+ L QAS VC+KW++ V QS+A+RE LS +G+ +DD
Sbjct: 2   DEEAAIDRLPLDLLAYIFSLVTSFTVLGQASGVCKKWRKAVNQSMARRESLSFAGWKMDD 61

Query: 616 DIAARIVRGAYGLKELDISRSCWRCKITDEGLYKISLAKCVGNLTSISMWGMARITDKGV 437
           D  +R+V  AY LKELDISRS W C ITD GLY+I+ A+CV NL S+S+WGM  ITD GV
Sbjct: 62  DSTSRLVHLAYNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLWGMTAITDSGV 121

Query: 436 IPLVSEATSLRHLNVGGTFITDESLFAIANSCPHLKAIVLWSCRHVTETGLIMLVNKCRK 257
           + L+S  +SL+HLN+GGTFITDESLFAIA  C HLK I +W CRHVTE GL++LVNKC K
Sbjct: 122 VQLISRTSSLQHLNIGGTFITDESLFAIAERCHHLKTIGMWCCRHVTERGLLVLVNKCGK 181

Query: 256 LESINVWGMRVPRNFFLDLIAISPALQIKPPSL 158
           LESIN+WG RVP + F+ L+ ISPALQIKP  L
Sbjct: 182 LESINLWGTRVPVDCFIALLTISPALQIKPMEL 214


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