BLASTX nr result

ID: Dioscorea21_contig00003374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003374
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ZRA9.1|TBB4_WHEAT RecName: Full=Tubulin beta-4 chain; AltNa...   211   7e-53
gb|AFW76044.1| tubulin beta-7 chain isoform 1 [Zea mays] gi|4139...   211   7e-53
gb|AFC88825.1| putative tubulin beta-7 chain [Miscanthus sinensis]    211   7e-53
ref|XP_003558402.1| PREDICTED: tubulin beta-4 chain-like [Brachy...   211   7e-53
gb|AEN19688.1| beta-tubulin [Cymbidium faberi]                        211   7e-53

>sp|Q9ZRA9.1|TBB4_WHEAT RecName: Full=Tubulin beta-4 chain; AltName: Full=Beta-4-tubulin
           gi|4098329|gb|AAD10490.1| beta-tubulin 4 [Triticum
           aestivum]
          Length = 445

 Score =  211 bits (536), Expect = 7e-53
 Identities = 102/116 (87%), Positives = 102/116 (87%)
 Frame = +1

Query: 1   ERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 180
           ERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG
Sbjct: 45  ERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 104

Query: 181 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYP 348
           HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH              ISKIREEYP
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP 160


>gb|AFW76044.1| tubulin beta-7 chain isoform 1 [Zea mays]
           gi|413943396|gb|AFW76045.1| tubulin beta-7 chain isoform
           2 [Zea mays]
          Length = 445

 Score =  211 bits (536), Expect = 7e-53
 Identities = 102/116 (87%), Positives = 102/116 (87%)
 Frame = +1

Query: 1   ERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 180
           ERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG
Sbjct: 45  ERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 104

Query: 181 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYP 348
           HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH              ISKIREEYP
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP 160


>gb|AFC88825.1| putative tubulin beta-7 chain [Miscanthus sinensis]
          Length = 298

 Score =  211 bits (536), Expect = 7e-53
 Identities = 102/116 (87%), Positives = 102/116 (87%)
 Frame = +1

Query: 1   ERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 180
           ERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG
Sbjct: 45  ERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 104

Query: 181 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYP 348
           HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH              ISKIREEYP
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP 160


>ref|XP_003558402.1| PREDICTED: tubulin beta-4 chain-like [Brachypodium distachyon]
          Length = 431

 Score =  211 bits (536), Expect = 7e-53
 Identities = 102/116 (87%), Positives = 102/116 (87%)
 Frame = +1

Query: 1   ERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 180
           ERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG
Sbjct: 45  ERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 104

Query: 181 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYP 348
           HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH              ISKIREEYP
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP 160


>gb|AEN19688.1| beta-tubulin [Cymbidium faberi]
          Length = 351

 Score =  211 bits (536), Expect = 7e-53
 Identities = 102/116 (87%), Positives = 102/116 (87%)
 Frame = +1

Query: 1   ERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 180
           ERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG
Sbjct: 45  ERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 104

Query: 181 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYP 348
           HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH              ISKIREEYP
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP 160


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