BLASTX nr result

ID: Dioscorea21_contig00003365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003365
         (1185 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281297.1| PREDICTED: AP-2 complex subunit mu [Vitis vi...   723   0.0  
ref|XP_004148486.1| PREDICTED: AP-2 complex subunit mu-like [Cuc...   718   0.0  
ref|XP_002329568.1| predicted protein [Populus trichocarpa] gi|1...   718   0.0  
ref|XP_002519831.1| clathrin coat associated protein ap-50, puta...   714   0.0  
ref|NP_199475.1| AP-2 complex subunit mu-1 [Arabidopsis thaliana...   712   0.0  

>ref|XP_002281297.1| PREDICTED: AP-2 complex subunit mu [Vitis vinifera]
            gi|297742129|emb|CBI33916.3| unnamed protein product
            [Vitis vinifera]
          Length = 438

 Score =  723 bits (1865), Expect = 0.0
 Identities = 359/374 (95%), Positives = 368/374 (98%)
 Frame = +3

Query: 3    NVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGY 182
            NVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGY
Sbjct: 65   NVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGY 124

Query: 183  PQNLSPEILKLYITQGGVRSPFSSKPSEKPVPNATLQVTGAVGWRREGLAYKKNEVFLDI 362
            PQNLSPEILKLYITQ GVRSPFSSKPS+KPVPNATLQVTGAVGWRREGL YKKNEVFLDI
Sbjct: 125  PQNLSPEILKLYITQEGVRSPFSSKPSDKPVPNATLQVTGAVGWRREGLVYKKNEVFLDI 184

Query: 363  VESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPSKSGK 542
            VESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRP+KSGK
Sbjct: 185  VESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPAKSGK 244

Query: 543  TIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRT 722
            TIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRT
Sbjct: 245  TIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRT 304

Query: 723  RLEVNVKVKSVFSGKMFALGVVVKVPVPKQTAKTNFQVTSGRAKYNAATDCIIWKIRKFP 902
            R+EVNVKVKSVF  KMFALGVV+K+PVPKQTAKT+FQVTSGRAKYNAATDC+IWKIRKFP
Sbjct: 305  RMEVNVKVKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNAATDCLIWKIRKFP 364

Query: 903  GQTESTMSAEVELITSMAEKKPWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEW 1082
            GQTE TMSAEVELI++MAEKK WTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEW
Sbjct: 365  GQTEPTMSAEVELISTMAEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEW 424

Query: 1083 VRYITKAGSYEIRC 1124
            VRYITKAGSYEIRC
Sbjct: 425  VRYITKAGSYEIRC 438


>ref|XP_004148486.1| PREDICTED: AP-2 complex subunit mu-like [Cucumis sativus]
          Length = 438

 Score =  718 bits (1853), Expect = 0.0
 Identities = 355/374 (94%), Positives = 366/374 (97%)
 Frame = +3

Query: 3    NVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGY 182
            NVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGY
Sbjct: 65   NVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGY 124

Query: 183  PQNLSPEILKLYITQGGVRSPFSSKPSEKPVPNATLQVTGAVGWRREGLAYKKNEVFLDI 362
            PQNLSPEILKLYITQ GVRSPFSSKPS+KPVPNATLQVTGAVGWRREGL YKKNEVFLDI
Sbjct: 125  PQNLSPEILKLYITQEGVRSPFSSKPSDKPVPNATLQVTGAVGWRREGLVYKKNEVFLDI 184

Query: 363  VESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPSKSGK 542
            VESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRP+KSGK
Sbjct: 185  VESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPAKSGK 244

Query: 543  TIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRT 722
            TIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRT
Sbjct: 245  TIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRT 304

Query: 723  RLEVNVKVKSVFSGKMFALGVVVKVPVPKQTAKTNFQVTSGRAKYNAATDCIIWKIRKFP 902
             +EVNVKVKSVF  KMFALGVV+K+PVPKQTAKT+FQVTSGRAKYNA+ DCI+WKIRKFP
Sbjct: 305  HMEVNVKVKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNASIDCIVWKIRKFP 364

Query: 903  GQTESTMSAEVELITSMAEKKPWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEW 1082
            GQTE TMSAEVELI++M E+KPWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEW
Sbjct: 365  GQTEPTMSAEVELISTMTERKPWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEW 424

Query: 1083 VRYITKAGSYEIRC 1124
            VRYITKAGSYEIRC
Sbjct: 425  VRYITKAGSYEIRC 438


>ref|XP_002329568.1| predicted protein [Populus trichocarpa] gi|118485142|gb|ABK94434.1|
            unknown [Populus trichocarpa] gi|222870277|gb|EEF07408.1|
            predicted protein [Populus trichocarpa]
          Length = 438

 Score =  718 bits (1853), Expect = 0.0
 Identities = 355/374 (94%), Positives = 367/374 (98%)
 Frame = +3

Query: 3    NVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGY 182
            NVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGY
Sbjct: 65   NVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGY 124

Query: 183  PQNLSPEILKLYITQGGVRSPFSSKPSEKPVPNATLQVTGAVGWRREGLAYKKNEVFLDI 362
            PQNLSPEILKLYITQ GVRSPFSSKP++KPVPNATLQVTGAVGWRREGL YKKNEVFLDI
Sbjct: 125  PQNLSPEILKLYITQEGVRSPFSSKPTDKPVPNATLQVTGAVGWRREGLVYKKNEVFLDI 184

Query: 363  VESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPSKSGK 542
            VESVNLLMSSKG+VLRCDVTGK+LMKCFLSGMPDLKLGLNDKIGLEKESQLKSRP+KSGK
Sbjct: 185  VESVNLLMSSKGNVLRCDVTGKVLMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPAKSGK 244

Query: 543  TIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRT 722
            TIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRT
Sbjct: 245  TIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRT 304

Query: 723  RLEVNVKVKSVFSGKMFALGVVVKVPVPKQTAKTNFQVTSGRAKYNAATDCIIWKIRKFP 902
            R+EVNVKVKSVF  KMFALGVV+K+PVPKQTAKT+FQVTSGRAKYNAA DCI+WKIRKFP
Sbjct: 305  RMEVNVKVKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNAAIDCIVWKIRKFP 364

Query: 903  GQTESTMSAEVELITSMAEKKPWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEW 1082
            GQTE TMSAEVELI++MAEKK WTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEW
Sbjct: 365  GQTEPTMSAEVELISTMAEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEW 424

Query: 1083 VRYITKAGSYEIRC 1124
            VRYITKAGSYEIRC
Sbjct: 425  VRYITKAGSYEIRC 438


>ref|XP_002519831.1| clathrin coat associated protein ap-50, putative [Ricinus communis]
            gi|223540877|gb|EEF42435.1| clathrin coat associated
            protein ap-50, putative [Ricinus communis]
          Length = 408

 Score =  714 bits (1844), Expect = 0.0
 Identities = 353/374 (94%), Positives = 366/374 (97%)
 Frame = +3

Query: 3    NVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGY 182
            NVYIVIVVSSNANVACAFKFV EAVALFKSYFGG+FDEDAIRNNFVLIYELLDEIMDFGY
Sbjct: 35   NVYIVIVVSSNANVACAFKFVAEAVALFKSYFGGSFDEDAIRNNFVLIYELLDEIMDFGY 94

Query: 183  PQNLSPEILKLYITQGGVRSPFSSKPSEKPVPNATLQVTGAVGWRREGLAYKKNEVFLDI 362
            PQNLSPEILKLYITQ GVRSPFSSKP++KPVPNATLQVTGAVGWRREGLAYKKNEVFLDI
Sbjct: 95   PQNLSPEILKLYITQEGVRSPFSSKPTDKPVPNATLQVTGAVGWRREGLAYKKNEVFLDI 154

Query: 363  VESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPSKSGK 542
            VESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRP+KSGK
Sbjct: 155  VESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPTKSGK 214

Query: 543  TIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRT 722
            TIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRT
Sbjct: 215  TIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRT 274

Query: 723  RLEVNVKVKSVFSGKMFALGVVVKVPVPKQTAKTNFQVTSGRAKYNAATDCIIWKIRKFP 902
            R+EVNVKVKSVF  KMFALGVV+K+PVPKQTAKT+FQVTSGRAKYNAA DC++WKIRKFP
Sbjct: 275  RMEVNVKVKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNAAIDCLVWKIRKFP 334

Query: 903  GQTESTMSAEVELITSMAEKKPWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEW 1082
            GQTE T+SAEVELI++M EKK WTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEW
Sbjct: 335  GQTEPTLSAEVELISTMQEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEW 394

Query: 1083 VRYITKAGSYEIRC 1124
            VRYITKAGSYEIRC
Sbjct: 395  VRYITKAGSYEIRC 408


>ref|NP_199475.1| AP-2 complex subunit mu-1 [Arabidopsis thaliana]
            gi|297794577|ref|XP_002865173.1| clathrin adaptor
            complexes medium subunit family protein [Arabidopsis
            lyrata subsp. lyrata] gi|2271477|gb|AAB88283.1| AP47/50p
            [Arabidopsis thaliana] gi|9758499|dbj|BAB08907.1|
            AP47/50p [Arabidopsis thaliana]
            gi|297311008|gb|EFH41432.1| clathrin adaptor complexes
            medium subunit family protein [Arabidopsis lyrata subsp.
            lyrata] gi|332008024|gb|AED95407.1| AP-2 complex subunit
            mu-1 [Arabidopsis thaliana]
          Length = 438

 Score =  712 bits (1837), Expect = 0.0
 Identities = 349/374 (93%), Positives = 365/374 (97%)
 Frame = +3

Query: 3    NVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGY 182
            NVYIVIVVSSNANVAC FKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGY
Sbjct: 65   NVYIVIVVSSNANVACGFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGY 124

Query: 183  PQNLSPEILKLYITQGGVRSPFSSKPSEKPVPNATLQVTGAVGWRREGLAYKKNEVFLDI 362
            PQNLSPEILKLYITQ GVRSPFSSKP +KPVPNATLQVTGAVGWRREGLAYKKNEVFLDI
Sbjct: 125  PQNLSPEILKLYITQEGVRSPFSSKPKDKPVPNATLQVTGAVGWRREGLAYKKNEVFLDI 184

Query: 363  VESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPSKSGK 542
            VESVNLLMSSKG+VLRCDVTGK+LMKCFLSGMPDLKLGLNDKIGLEKES++KSRP+KSGK
Sbjct: 185  VESVNLLMSSKGNVLRCDVTGKVLMKCFLSGMPDLKLGLNDKIGLEKESEMKSRPAKSGK 244

Query: 543  TIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRT 722
            TIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRT
Sbjct: 245  TIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRT 304

Query: 723  RLEVNVKVKSVFSGKMFALGVVVKVPVPKQTAKTNFQVTSGRAKYNAATDCIIWKIRKFP 902
            R+EVNVKVKSVF  KMFALGVVVK+PVPKQTAKTNFQVT+GRAKYN + DC++WKIRKFP
Sbjct: 305  RMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTNFQVTTGRAKYNPSIDCLVWKIRKFP 364

Query: 903  GQTESTMSAEVELITSMAEKKPWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEW 1082
            GQTEST+SAE+ELI++M EKK WTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEW
Sbjct: 365  GQTESTLSAEIELISTMGEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEW 424

Query: 1083 VRYITKAGSYEIRC 1124
            VRYITKAGSYEIRC
Sbjct: 425  VRYITKAGSYEIRC 438


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