BLASTX nr result

ID: Dioscorea21_contig00003364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003364
         (1360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06556.1| mitochondrial ATP synthase gamma chain [Elaeis gu...   537   e-150
ref|XP_003573877.1| PREDICTED: ATP synthase subunit gamma, mitoc...   526   e-147
gb|AFW89210.1| ATP synthase gamma chain [Zea mays]                    523   e-146
dbj|BAJ87277.1| predicted protein [Hordeum vulgare subsp. vulgare]    522   e-146
ref|XP_002531492.1| ATP synthase f1, gamma subunit, putative [Ri...   518   e-144

>gb|ACF06556.1| mitochondrial ATP synthase gamma chain [Elaeis guineensis]
          Length = 323

 Score =  537 bits (1384), Expect = e-150
 Identities = 278/324 (85%), Positives = 304/324 (93%), Gaps = 2/324 (0%)
 Frame = +2

Query: 77   MAMAALRREGRRFLL-PSNPSPVVA-RSAIFSEESSAALGVRGVSTQIVRNRMKSVRNIQ 250
            MAM ALRREGRRFLL P +P+P  A RSAI SEE + + G R +STQ+VRNRMKSV+NIQ
Sbjct: 1    MAMVALRREGRRFLLSPMSPNPATAARSAILSEEFNPS-GTRSISTQVVRNRMKSVKNIQ 59

Query: 251  KITKAMKMVAASKLRAVQVRTENSRGLWQPFTALLGDAPSVDVKKNVIITISSDKGLCGG 430
            KITKAMKMVAASKLRAVQ+RTENSRGLWQPFTALLGD PSVDVKKNVI+TI+SDKGLCGG
Sbjct: 60   KITKAMKMVAASKLRAVQIRTENSRGLWQPFTALLGDVPSVDVKKNVIVTITSDKGLCGG 119

Query: 431  INSTSVKISKSLYKVTSGPEKETKYVVLGEKGKVQLMRDSKNHIEMTISELQKNPLNFTQ 610
            INSTSVKISKSLYK TSGPEKETKYV+LGEKGKVQ++RDSKN IEM+I+ELQKNPLN+TQ
Sbjct: 120  INSTSVKISKSLYKFTSGPEKETKYVILGEKGKVQMVRDSKNSIEMSITELQKNPLNYTQ 179

Query: 611  VSVLADDILKNVEFDALRIVYNKFQSVVQFLPTINTILSPEIVERESEAGGKLGDLDSYE 790
            VSVLADDILKNVE+DALRI++NKF SVV F+PT++TILSPE+VERESE+GGKLG+LDSYE
Sbjct: 180  VSVLADDILKNVEYDALRIIFNKFHSVVSFIPTVSTILSPEVVERESESGGKLGNLDSYE 239

Query: 791  IEGGETKAEILQNLAEFQFSCVLFNAVLENACSELGARMSAMDSSSRNAGEMLDRLTLTY 970
            IEGGETKAE+LQNLAEFQFSCVLFNA LENACSELGARMSAMDSSSRNAGEMLDRLTLTY
Sbjct: 240  IEGGETKAEVLQNLAEFQFSCVLFNAALENACSELGARMSAMDSSSRNAGEMLDRLTLTY 299

Query: 971  NRTRQASITTELTEIISGASALEG 1042
            NRTRQASITTEL EIISGASAL G
Sbjct: 300  NRTRQASITTELIEIISGASALTG 323


>ref|XP_003573877.1| PREDICTED: ATP synthase subunit gamma, mitochondrial-like
            [Brachypodium distachyon]
          Length = 326

 Score =  526 bits (1354), Expect = e-147
 Identities = 266/324 (82%), Positives = 299/324 (92%), Gaps = 2/324 (0%)
 Frame = +2

Query: 77   MAMAALRREGRRFLL--PSNPSPVVARSAIFSEESSAALGVRGVSTQIVRNRMKSVRNIQ 250
            MAM ALRREGRR LL  PS  + + ARS   S+   A LG R +STQIVRNRMKSV+NIQ
Sbjct: 3    MAMTALRREGRRALLSAPSQSAAMAARSPAISQPEIAPLGARSISTQIVRNRMKSVKNIQ 62

Query: 251  KITKAMKMVAASKLRAVQVRTENSRGLWQPFTALLGDAPSVDVKKNVIITISSDKGLCGG 430
            KITKAMKMVAASKLRAVQ RTENSRGLWQPFTALLGDAPSVDVKKNVI+ I+SDKGLCGG
Sbjct: 63   KITKAMKMVAASKLRAVQTRTENSRGLWQPFTALLGDAPSVDVKKNVIVAITSDKGLCGG 122

Query: 431  INSTSVKISKSLYKVTSGPEKETKYVVLGEKGKVQLMRDSKNHIEMTISELQKNPLNFTQ 610
            INSTSVK+SK+L K+TSGPEKE+KYV+LGEKGKVQL+RDS+ HIEMT+SELQKNP+N+TQ
Sbjct: 123  INSTSVKVSKALQKMTSGPEKESKYVILGEKGKVQLIRDSRKHIEMTVSELQKNPINYTQ 182

Query: 611  VSVLADDILKNVEFDALRIVYNKFQSVVQFLPTINTILSPEIVERESEAGGKLGDLDSYE 790
            V+VLADDILKNVE+DA+R+++NKFQSV+ F PT+ TILSPE++E+ESE+GGK+GDLDSYE
Sbjct: 183  VAVLADDILKNVEYDAIRVIFNKFQSVISFRPTLVTILSPEVMEKESESGGKVGDLDSYE 242

Query: 791  IEGGETKAEILQNLAEFQFSCVLFNAVLENACSELGARMSAMDSSSRNAGEMLDRLTLTY 970
            IEGGETK+EILQNL EFQFSCV++NAVLENACSELGARMSAMDSSSRNAGEMLDRLTLTY
Sbjct: 243  IEGGETKSEILQNLTEFQFSCVMYNAVLENACSELGARMSAMDSSSRNAGEMLDRLTLTY 302

Query: 971  NRTRQASITTELTEIISGASALEG 1042
            NRTRQASITTELTEIISGASALEG
Sbjct: 303  NRTRQASITTELTEIISGASALEG 326


>gb|AFW89210.1| ATP synthase gamma chain [Zea mays]
          Length = 330

 Score =  523 bits (1346), Expect = e-146
 Identities = 269/330 (81%), Positives = 299/330 (90%), Gaps = 8/330 (2%)
 Frame = +2

Query: 77   MAMAALRREGRRFLLPS---NPS-----PVVARSAIFSEESSAALGVRGVSTQIVRNRMK 232
            MAMAALRREGRR +L S   NPS       V RS+  S+   A LG R +STQIVRNRMK
Sbjct: 1    MAMAALRREGRRLILSSTVPNPSLAAASSAVTRSSAVSQPEMAPLGARSISTQIVRNRMK 60

Query: 233  SVRNIQKITKAMKMVAASKLRAVQVRTENSRGLWQPFTALLGDAPSVDVKKNVIITISSD 412
            SVRNIQKITKAMKMVAASKLRAVQ RTENSRGLWQPFTALLGDAPSVDVKKNVI+ I+SD
Sbjct: 61   SVRNIQKITKAMKMVAASKLRAVQTRTENSRGLWQPFTALLGDAPSVDVKKNVIVAITSD 120

Query: 413  KGLCGGINSTSVKISKSLYKVTSGPEKETKYVVLGEKGKVQLMRDSKNHIEMTISELQKN 592
            KGLCGGINSTSVK+S++L+K+TSGPEKETKYV+LGEKGKVQL+RDSK+ IEMT +ELQKN
Sbjct: 121  KGLCGGINSTSVKVSRALHKLTSGPEKETKYVILGEKGKVQLLRDSKDSIEMTATELQKN 180

Query: 593  PLNFTQVSVLADDILKNVEFDALRIVYNKFQSVVQFLPTINTILSPEIVERESEAGGKLG 772
            P+N+TQV+VLADDILKNVE+DALR+++NKFQSV+ F PT+ TILSPE+ E+ESEAGGK+G
Sbjct: 181  PINYTQVAVLADDILKNVEYDALRVIFNKFQSVISFKPTMVTILSPEVAEKESEAGGKMG 240

Query: 773  DLDSYEIEGGETKAEILQNLAEFQFSCVLFNAVLENACSELGARMSAMDSSSRNAGEMLD 952
            DLDSYEIEGGETK+EILQNLAEFQFSCVL+N  LENACSELGARMSAMDSSSRNAG+MLD
Sbjct: 241  DLDSYEIEGGETKSEILQNLAEFQFSCVLYNGALENACSELGARMSAMDSSSRNAGDMLD 300

Query: 953  RLTLTYNRTRQASITTELTEIISGASALEG 1042
            RLTLTYNRTRQASITTELTEIISGASALEG
Sbjct: 301  RLTLTYNRTRQASITTELTEIISGASALEG 330


>dbj|BAJ87277.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 326

 Score =  522 bits (1345), Expect = e-146
 Identities = 267/325 (82%), Positives = 300/325 (92%), Gaps = 3/325 (0%)
 Frame = +2

Query: 77   MAMAALRREGRRFLLPSNPSPVVARSA---IFSEESSAALGVRGVSTQIVRNRMKSVRNI 247
            MAMAALRREGRR LL S PSP  A +A     S+   A LG R +STQIVRNRMKSV+NI
Sbjct: 3    MAMAALRREGRRVLL-STPSPAAAMAAHSPAASQSQIAPLGARSISTQIVRNRMKSVKNI 61

Query: 248  QKITKAMKMVAASKLRAVQVRTENSRGLWQPFTALLGDAPSVDVKKNVIITISSDKGLCG 427
            QKITKAMKMVAASKLRAVQ RTENSRGLWQPFTALLGDAPSV+VKKNVI+ I+SDKGLCG
Sbjct: 62   QKITKAMKMVAASKLRAVQTRTENSRGLWQPFTALLGDAPSVNVKKNVIVAITSDKGLCG 121

Query: 428  GINSTSVKISKSLYKVTSGPEKETKYVVLGEKGKVQLMRDSKNHIEMTISELQKNPLNFT 607
            GINSTSVK+SK+L K+TSGPEKE+KYV+LGEKGKVQL+RDS+ HIEMT+SELQKNP+N+T
Sbjct: 122  GINSTSVKVSKALQKMTSGPEKESKYVILGEKGKVQLIRDSRKHIEMTVSELQKNPINYT 181

Query: 608  QVSVLADDILKNVEFDALRIVYNKFQSVVQFLPTINTILSPEIVERESEAGGKLGDLDSY 787
            QV+VLADDILKNVE+DA+R+V+NKFQSV+ F PT+ TILSPE++E+ESE+GGK+G+LDSY
Sbjct: 182  QVAVLADDILKNVEYDAIRVVFNKFQSVISFRPTLATILSPEVMEKESESGGKVGELDSY 241

Query: 788  EIEGGETKAEILQNLAEFQFSCVLFNAVLENACSELGARMSAMDSSSRNAGEMLDRLTLT 967
            EIEGGETK+EILQNL EFQFSCV++NAVLENACSELGARMSAMDSSSRNAGEMLDRLTLT
Sbjct: 242  EIEGGETKSEILQNLTEFQFSCVMYNAVLENACSELGARMSAMDSSSRNAGEMLDRLTLT 301

Query: 968  YNRTRQASITTELTEIISGASALEG 1042
            YNRTRQASITTELTEIISGASALEG
Sbjct: 302  YNRTRQASITTELTEIISGASALEG 326


>ref|XP_002531492.1| ATP synthase f1, gamma subunit, putative [Ricinus communis]
            gi|223528879|gb|EEF30879.1| ATP synthase f1, gamma
            subunit, putative [Ricinus communis]
          Length = 326

 Score =  518 bits (1333), Expect = e-144
 Identities = 266/326 (81%), Positives = 295/326 (90%), Gaps = 4/326 (1%)
 Frame = +2

Query: 77   MAMAALRREGRRF---LLPSNPSPVVARSAIFSE-ESSAALGVRGVSTQIVRNRMKSVRN 244
            MAMAALRREGRRF   L+   P     RS++ +  E  A  GVR +STQ+VRNRMKS++N
Sbjct: 1    MAMAALRREGRRFASPLISHQPITAAVRSSLLAAAEEQAPFGVRSISTQVVRNRMKSIKN 60

Query: 245  IQKITKAMKMVAASKLRAVQVRTENSRGLWQPFTALLGDAPSVDVKKNVIITISSDKGLC 424
            IQKITKAMKMVAASKLRA+Q R ENSRGLWQPFTALLGDAPSVDVKKNVI+TISSDKGLC
Sbjct: 61   IQKITKAMKMVAASKLRAIQTRAENSRGLWQPFTALLGDAPSVDVKKNVIVTISSDKGLC 120

Query: 425  GGINSTSVKISKSLYKVTSGPEKETKYVVLGEKGKVQLMRDSKNHIEMTISELQKNPLNF 604
            GGINSTSVK S++L+K+TSGPEKETKYV+LGEK K QL+RDSK  IE+ I+ELQKNPLN+
Sbjct: 121  GGINSTSVKTSRALHKLTSGPEKETKYVILGEKAKAQLIRDSKKDIELCITELQKNPLNY 180

Query: 605  TQVSVLADDILKNVEFDALRIVYNKFQSVVQFLPTINTILSPEIVERESEAGGKLGDLDS 784
            TQVSVLADDILKNVEF+ALR+V+NKFQSVV FLPT++T+LSPE++ERE+E+GGKLGDLDS
Sbjct: 181  TQVSVLADDILKNVEFEALRVVFNKFQSVVSFLPTMSTVLSPEVMEREAESGGKLGDLDS 240

Query: 785  YEIEGGETKAEILQNLAEFQFSCVLFNAVLENACSELGARMSAMDSSSRNAGEMLDRLTL 964
            YEIEGGETK EILQNLAEFQFSCVLFNAVLENACSE GARMSAMDSSSRNAGEMLDRLTL
Sbjct: 241  YEIEGGETKGEILQNLAEFQFSCVLFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTL 300

Query: 965  TYNRTRQASITTELTEIISGASALEG 1042
            TYNRTRQASITTEL EIISGASALEG
Sbjct: 301  TYNRTRQASITTELIEIISGASALEG 326


Top