BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003353
         (1653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containi...   484   e-134
emb|CBI33534.3| unnamed protein product [Vitis vinifera]              483   e-134
ref|XP_002532468.1| pentatricopeptide repeat-containing protein,...   469   e-130
ref|XP_003570219.1| PREDICTED: pentatricopeptide repeat-containi...   466   e-129
ref|NP_001047900.1| Os02g0711100 [Oryza sativa Japonica Group] g...   461   e-127

>ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Vitis vinifera]
          Length = 502

 Score =  484 bits (1246), Expect = e-134
 Identities = 248/484 (51%), Positives = 319/484 (65%), Gaps = 1/484 (0%)
 Frame = -3

Query: 1651 HR-KRSIEKTATAAAVSEPAKRRRFPSYLDAPKLPPKTRLLCEILATAPISSIERAFDDS 1475
            HR KR    T  +A   +  KR  FP+YL+ P L PK RLLCEI+A  P S++E    D+
Sbjct: 22   HRNKRHSSSTTDSATHHQTPKRPSFPTYLETPNLSPKVRLLCEIIANTPSSTVEEVLHDT 81

Query: 1474 GVRALSPDDVEAVLKLSYSHPDAAVAFFRWAGHLLPRPHQYSPYSWNLVVDLLGKSLRFE 1295
             +R +SP+DVE  LKLSY  P +AV FFRW+GH L   H  SPYSWNLVVD+LGK+  F+
Sbjct: 82   AIR-VSPEDVEDSLKLSYGFPGSAVKFFRWSGHQLNDNH--SPYSWNLVVDMLGKNFLFD 138

Query: 1294 AMWDTVRSMHNHRLLSLATFASIFSSYXXXXXXXXXXXAFHAMPRYDLPQDPPALNSLLS 1115
            AMWD V+SM    LLSLATFASIFSSY            F  M +Y  P+D  ALNSLLS
Sbjct: 139  AMWDAVKSMKKQGLLSLATFASIFSSYVIADRVREAIMTFDVMEQYGCPRDIVALNSLLS 198

Query: 1114 ALCRERLSTQARDFLSRLRSQIRPDADSYAILLEGCEYENNLSSAREVFGEMITALGWEP 935
            A+CR+  + QA +FL  +R  IRPDAD+YAILLEG E E N  +AR+ F EM+  +GW+P
Sbjct: 199  AICRDGRTVQAAEFLRNVRGLIRPDADTYAILLEGWESEGNCGAARQTFDEMVMDIGWDP 258

Query: 934  SNIPAYDSFLSNLIRAPGGPDEALSFLKILRDNRCFPGIKFFRTALDEFVKQRDARGALS 755
             N+ AYDSFL+ L+  P G  EA+ F +I+RD +C PG++F+R  L E VK  D++GA  
Sbjct: 259  GNVSAYDSFLNALLHGPDGRREAMKFFEIMRDRQCSPGMRFYRIGLQECVKTSDSKGAQL 318

Query: 754  LWDTLIGRNGCHPDTPMFNSMISLQCYHNKMDIALQLLDEMVIFGAFPDSQTYNMLLQFL 575
            LW T++ RN C PDT M+NSMI+L C  + + +A  +LDEMV  GAFPDS+TYN+L +FL
Sbjct: 319  LWQTMLSRNICRPDTEMYNSMIALHCSCDNIVMARGMLDEMVCNGAFPDSETYNVLFRFL 378

Query: 574  LKSRKLREASVIFNEMVKNECCPSTENCHCGIRIFLNNGDWEMGVKVWKCMVTNELVPLE 395
            ++ RKL EA  IF+EMV+NEC P   NC+  +RI+L+ GD    +KVWK ++ N    LE
Sbjct: 379  IRRRKLEEAFSIFSEMVQNECVPDLTNCNAAVRIYLDLGDVYKAIKVWKYIIENHDSGLE 438

Query: 394  ESANMLIVSLRDLDKLPEACKYAEDMIDKGIXXXXXXXXXXXXXXXXXXKGGVYDHLLRK 215
            E+ N+L+  LRD D++PEA KYA+DMI +GI                  KG VYD LLRK
Sbjct: 439  ETGNLLVTGLRDHDRIPEAVKYAKDMIVRGIKLTSSTLSKLKHALVEVGKGPVYDELLRK 498

Query: 214  WKAR 203
            WK R
Sbjct: 499  WKTR 502


>emb|CBI33534.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  483 bits (1242), Expect = e-134
 Identities = 245/481 (50%), Positives = 317/481 (65%)
 Frame = -3

Query: 1645 KRSIEKTATAAAVSEPAKRRRFPSYLDAPKLPPKTRLLCEILATAPISSIERAFDDSGVR 1466
            +R    T  +A   +  KR  FP+YL+ P L PK RLLCEI+A  P S++E    D+ +R
Sbjct: 29   RRHSSSTTDSATHHQTPKRPSFPTYLETPNLSPKVRLLCEIIANTPSSTVEEVLHDTAIR 88

Query: 1465 ALSPDDVEAVLKLSYSHPDAAVAFFRWAGHLLPRPHQYSPYSWNLVVDLLGKSLRFEAMW 1286
             +SP+DVE  LKLSY  P +AV FFRW+GH L   H  SPYSWNLVVD+LGK+  F+AMW
Sbjct: 89   -VSPEDVEDSLKLSYGFPGSAVKFFRWSGHQLNDNH--SPYSWNLVVDMLGKNFLFDAMW 145

Query: 1285 DTVRSMHNHRLLSLATFASIFSSYXXXXXXXXXXXAFHAMPRYDLPQDPPALNSLLSALC 1106
            D V+SM    LLSLATFASIFSSY            F  M +Y  P+D  ALNSLLSA+C
Sbjct: 146  DAVKSMKKQGLLSLATFASIFSSYVIADRVREAIMTFDVMEQYGCPRDIVALNSLLSAIC 205

Query: 1105 RERLSTQARDFLSRLRSQIRPDADSYAILLEGCEYENNLSSAREVFGEMITALGWEPSNI 926
            R+  + QA +FL  +R  IRPDAD+YAILLEG E E N  +AR+ F EM+  +GW+P N+
Sbjct: 206  RDGRTVQAAEFLRNVRGLIRPDADTYAILLEGWESEGNCGAARQTFDEMVMDIGWDPGNV 265

Query: 925  PAYDSFLSNLIRAPGGPDEALSFLKILRDNRCFPGIKFFRTALDEFVKQRDARGALSLWD 746
             AYDSFL+ L+  P G  EA+ F +I+RD +C PG++F+R  L E VK  D++GA  LW 
Sbjct: 266  SAYDSFLNALLHGPDGRREAMKFFEIMRDRQCSPGMRFYRIGLQECVKTSDSKGAQLLWQ 325

Query: 745  TLIGRNGCHPDTPMFNSMISLQCYHNKMDIALQLLDEMVIFGAFPDSQTYNMLLQFLLKS 566
            T++ RN C PDT M+NSMI+L C  + + +A  +LDEMV  GAFPDS+TYN+L +FL++ 
Sbjct: 326  TMLSRNICRPDTEMYNSMIALHCSCDNIVMARGMLDEMVCNGAFPDSETYNVLFRFLIRR 385

Query: 565  RKLREASVIFNEMVKNECCPSTENCHCGIRIFLNNGDWEMGVKVWKCMVTNELVPLEESA 386
            RKL EA  IF+EMV+NEC P   NC+  +RI+L+ GD    +KVWK ++ N    LEE+ 
Sbjct: 386  RKLEEAFSIFSEMVQNECVPDLTNCNAAVRIYLDLGDVYKAIKVWKYIIENHDSGLEETG 445

Query: 385  NMLIVSLRDLDKLPEACKYAEDMIDKGIXXXXXXXXXXXXXXXXXXKGGVYDHLLRKWKA 206
            N+L+  LRD D++PEA KYA+DMI +GI                  KG VYD LLRKWK 
Sbjct: 446  NLLVTGLRDHDRIPEAVKYAKDMIVRGIKLTSSTLSKLKHALVEVGKGPVYDELLRKWKT 505

Query: 205  R 203
            R
Sbjct: 506  R 506


>ref|XP_002532468.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527826|gb|EEF29924.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 510

 Score =  469 bits (1208), Expect = e-130
 Identities = 245/485 (50%), Positives = 318/485 (65%), Gaps = 3/485 (0%)
 Frame = -3

Query: 1651 HRKRSIEKTATAAAVSE---PAKRRRFPSYLDAPKLPPKTRLLCEILATAPISSIERAFD 1481
            H   S   +A AAA +    P K   FPSYL+ P L PK +LLCEI+A  P S++E   D
Sbjct: 28   HSLSSSSSSAAAAATTTTAYPNKHPTFPSYLETPNLSPKIKLLCEIIAKIPSSTVETILD 87

Query: 1480 DSGVRALSPDDVEAVLKLSYSHPDAAVAFFRWAGHLLPRPHQYSPYSWNLVVDLLGKSLR 1301
            ++G+  +S  DVE V+KLSYS P  AV FFRWAG  L   H  SPYSWNLVVDLLGK+  
Sbjct: 88   ETGLY-VSQYDVEQVIKLSYSFPGPAVKFFRWAGFRLQDNH--SPYSWNLVVDLLGKNCL 144

Query: 1300 FEAMWDTVRSMHNHRLLSLATFASIFSSYXXXXXXXXXXXAFHAMPRYDLPQDPPALNSL 1121
            F+AMWD ++SM +  L+SLATFAS+F SY            F  M +Y + +D  ALNSL
Sbjct: 145  FDAMWDAIKSMKSKELVSLATFASVFGSYVTAGRVKDAIFTFEVMNQYGVVRDVVALNSL 204

Query: 1120 LSALCRERLSTQARDFLSRLRSQIRPDADSYAILLEGCEYENNLSSAREVFGEMITALGW 941
            LSA+CR+  +  A DFL   ++ I+PDAD++AILLEG E E NL ++R+ F EM+  +GW
Sbjct: 205  LSAICRDGKTVDAVDFLFVAKNSIKPDADTFAILLEGWEKELNLVNSRQTFDEMVREIGW 264

Query: 940  EPSNIPAYDSFLSNLIRAPGGPDEALSFLKILRDNRCFPGIKFFRTALDEFVKQRDARGA 761
            +P+N PAYD+FL  L+    G +E + FL+I+++ RC PG++FFR A++E +K  D R A
Sbjct: 265  DPANTPAYDTFLCTLLMGRIGFNEVIEFLEIMKEKRCCPGMRFFRAAIEECLKVNDVRVA 324

Query: 760  LSLWDTLIGRNGCHPDTPMFNSMISLQCYHNKMDIALQLLDEMVIFGAFPDSQTYNMLLQ 581
              +W+ ++  NG  PD  M+N MISL CY N  DIAL+ LDEMV  G FPD QTYN+L Q
Sbjct: 325  GLIWEVMMETNGFRPDIEMYNLMISLYCYTNNTDIALRFLDEMVYNGVFPDRQTYNLLFQ 384

Query: 580  FLLKSRKLREASVIFNEMVKNECCPSTENCHCGIRIFLNNGDWEMGVKVWKCMVTNELVP 401
            FL+KSRKL+EASV+FNEM+KNEC P+  NC   +R+F+++ D  M +KVWKCM+ N  + 
Sbjct: 385  FLIKSRKLKEASVLFNEMIKNECLPNQANCSAAVRVFMHSKDPYMAIKVWKCMIENYELD 444

Query: 400  LEESANMLIVSLRDLDKLPEACKYAEDMIDKGIXXXXXXXXXXXXXXXXXXKGGVYDHLL 221
            LEE+ N+LIV L DL   PEA KYAE MI KGI                  K  VY+ LL
Sbjct: 445  LEETGNLLIVELCDLHMDPEAVKYAESMIGKGIKVTSPTMEKLKLCLKQARKEFVYERLL 504

Query: 220  RKWKA 206
            RKWKA
Sbjct: 505  RKWKA 509


>ref|XP_003570219.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Brachypodium distachyon]
          Length = 488

 Score =  466 bits (1200), Expect = e-129
 Identities = 253/487 (51%), Positives = 319/487 (65%), Gaps = 10/487 (2%)
 Frame = -3

Query: 1633 EKTATAAAVSEPAKRRR------FPSYLDAPKLPPKTRLLCEILATAPISSIERAFDDSG 1472
            ++ + AAA +  AKR R      FP+Y DAP LPPK RLLCEILA+ P + +E A DD+ 
Sbjct: 7    KRPSDAAAAAPAAKRARAQAAPVFPTYKDAPDLPPKIRLLCEILAS-PATDVEAALDDAA 65

Query: 1471 VRALSPDDVEAVLKLSYSHPDAAVAFFRWAGHLLPRPHQYSPYSWNLVVDLLGKSLRFEA 1292
            VR ++  DVE VL+ SY+HP  A AFFRWAGH   R HQ+SPYSWNLV+DLLGK+  F+ 
Sbjct: 66   VR-VTTSDVEQVLRFSYAHPRGAAAFFRWAGHRHLR-HQHSPYSWNLVIDLLGKNRLFDP 123

Query: 1291 MWDTVRSMHNHRLLSLATFASIFSSYXXXXXXXXXXXAFHAMPRYDLPQDPPALNSLLSA 1112
            MWDTV SM +  LLSLA+FAS+FSS             F  MP+Y + +D PALNSLLSA
Sbjct: 124  MWDTVSSMRSQGLLSLASFASVFSSLAADPVSSPLKA-FVDMPKYGMDRDTPALNSLLSA 182

Query: 1111 LCRERLSTQARDFL--SRLRSQIRPDADSYAILLEGCEYENNLSSAREVFGEMITALGWE 938
            LCR      AR  +  +R  +  RPDADSYAILLEGCE   + + AREVF EM+  +G++
Sbjct: 183  LCRASRLDDARAAIPVARAEASTRPDADSYAILLEGCEAAGDPAVAREVFDEMVRHVGFD 242

Query: 937  PSNIPAYDSFLSNLIRAPGGP--DEALSFLKILRDNRCFPGIKFFRTALDEFVKQRDARG 764
            P+N+PAYDSFL+ L+ +       EA+ +L +LR  RC PG KF R AL   +K +D RG
Sbjct: 243  PANVPAYDSFLTTLVSSSSTTALTEAMDYLAVLRRYRCSPGEKFLRAALAAHLKAQDLRG 302

Query: 763  ALSLWDTLIGRNGCHPDTPMFNSMISLQCYHNKMDIALQLLDEMVIFGAFPDSQTYNMLL 584
            A  LWD  + R G  PD  M++SMI LQ      ++ ++ +D+M  +G FPD+ TYNM+L
Sbjct: 303  AQVLWDDFVVRLGLIPDKEMYSSMIMLQGTLGHAEVIVEYVDDMAFYGVFPDADTYNMVL 362

Query: 583  QFLLKSRKLREASVIFNEMVKNECCPSTENCHCGIRIFLNNGDWEMGVKVWKCMVTNELV 404
            + LLK RKLREAS IF EMVKNEC P+  NC   +R+FL+  DWE G+KVW CMV N L 
Sbjct: 363  KLLLKGRKLREASAIFREMVKNECWPNEANCSLALRMFLDTRDWETGIKVWNCMVANGLP 422

Query: 403  PLEESANMLIVSLRDLDKLPEACKYAEDMIDKGIXXXXXXXXXXXXXXXXXXKGGVYDHL 224
            PLEES NML+  L+D + LPEACKYAEDMID+GI                  KG ++D L
Sbjct: 423  PLEESGNMLVSKLKD-EMLPEACKYAEDMIDQGIKVSSSTLGKLRLCLVKVKKGAIHDRL 481

Query: 223  LRKWKAR 203
            L KWKAR
Sbjct: 482  LTKWKAR 488


>ref|NP_001047900.1| Os02g0711100 [Oryza sativa Japonica Group]
            gi|41052650|dbj|BAD07498.1| pentatricopeptide (PPR)
            repeat-containing protein-like [Oryza sativa Japonica
            Group] gi|41052866|dbj|BAD07780.1| pentatricopeptide
            (PPR) repeat-containing protein-like [Oryza sativa
            Japonica Group] gi|113537431|dbj|BAF09814.1| Os02g0711100
            [Oryza sativa Japonica Group] gi|125540864|gb|EAY87259.1|
            hypothetical protein OsI_08660 [Oryza sativa Indica
            Group] gi|215687282|dbj|BAG91847.1| unnamed protein
            product [Oryza sativa Japonica Group]
          Length = 489

 Score =  461 bits (1185), Expect = e-127
 Identities = 256/482 (53%), Positives = 314/482 (65%), Gaps = 10/482 (2%)
 Frame = -3

Query: 1621 TAAAVSEPAKRRR------FPSYLDAPKLPPKTRLLCEILATAPISSIERAFDDSGVRAL 1460
            + AA S  AKR R      FP+Y DAP LPPK RLLCEILA++    ++ A DD+ VR  
Sbjct: 12   SVAAASPAAKRARDPSAPAFPTYRDAPDLPPKIRLLCEILASSA-PDVDAALDDADVRVT 70

Query: 1459 SPDDVEAVLKLSYSHPDAAVAFFRWAGHLLPRPHQYSPYSWNLVVDLLGKSLRFEAMWDT 1280
            S  DVE VL+ SY+HP AAVAFFRWAGH   R HQ+SPYSWNLVVDLLGK+  FE MWDT
Sbjct: 71   S-SDVEQVLRFSYAHPRAAVAFFRWAGHRHLR-HQHSPYSWNLVVDLLGKNRLFEPMWDT 128

Query: 1279 VRSMHNHRLLSLATFASIFSSYXXXXXXXXXXXAFHAMPRYDLPQDPPALNSLLSALCRE 1100
            V SM    LLSLATFAS+FSS             F  +P Y + +D PALNSLLSALCR 
Sbjct: 129  VSSMRTQGLLSLATFASVFSSLAANPASSPLRA-FVELPMYGMDRDTPALNSLLSALCRA 187

Query: 1099 RLSTQARDFL--SRLRSQIRPDADSYAILLEGCEYENNLSSAREVFGEMITALGWEPSNI 926
                 AR  +  +R  +  RPDADSYAILLEGCE   +   AREVF EM   +G++P+N+
Sbjct: 188  SRLDDARAAIPVARAEAGTRPDADSYAILLEGCEAAGDPHVAREVFDEMRHVIGFDPANV 247

Query: 925  PAYDSFLSNLIRAPGGPD--EALSFLKILRDNRCFPGIKFFRTALDEFVKQRDARGALSL 752
            PAYDSFL+ LI +       +A+ +L IL   RC PG KFFR AL   +K R+ RGA+ L
Sbjct: 248  PAYDSFLTTLISSGSSTALMDAMDYLAILHRQRCSPGEKFFRAALAAHLKARELRGAVVL 307

Query: 751  WDTLIGRNGCHPDTPMFNSMISLQCYHNKMDIALQLLDEMVIFGAFPDSQTYNMLLQFLL 572
            W+  + R G  PD  M+++MI LQ      ++ ++ LDEM   G FPD+ TYNM+ QFLL
Sbjct: 308  WNDFVVRRGLIPDKEMYSTMIMLQGTLGHPEVIVEYLDEMTFDGVFPDADTYNMVFQFLL 367

Query: 571  KSRKLREASVIFNEMVKNECCPSTENCHCGIRIFLNNGDWEMGVKVWKCMVTNELVPLEE 392
            K RKLREAS IF+EMVKNE  P+  NC   +R+FL+  DW+ G+K+WKCMV N L PLEE
Sbjct: 368  KGRKLREASAIFSEMVKNEFWPNEANCSLALRMFLDTRDWDSGIKLWKCMVENGLPPLEE 427

Query: 391  SANMLIVSLRDLDKLPEACKYAEDMIDKGIXXXXXXXXXXXXXXXXXXKGGVYDHLLRKW 212
            S NML+  L+D ++LPEACKYAEDMID+ I                  KG ++DHLLRKW
Sbjct: 428  SGNMLVSKLKD-ERLPEACKYAEDMIDRCIKLSSSTMSKLKQCLMKVYKGHIHDHLLRKW 486

Query: 211  KA 206
            KA
Sbjct: 487  KA 488