BLASTX nr result

ID: Dioscorea21_contig00003344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003344
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521507.1| Ubiquitin-conjugating enzyme E2-18 kDa, puta...   325   8e-87
ref|XP_002327679.1| predicted protein [Populus trichocarpa] gi|2...   325   1e-86
ref|XP_002274933.1| PREDICTED: probable ubiquitin-conjugating en...   323   3e-86
ref|XP_002310827.1| predicted protein [Populus trichocarpa] gi|2...   322   5e-86
ref|XP_002280882.1| PREDICTED: probable ubiquitin-conjugating en...   322   9e-86

>ref|XP_002521507.1| Ubiquitin-conjugating enzyme E2-18 kDa, putative [Ricinus communis]
           gi|223539185|gb|EEF40778.1| Ubiquitin-conjugating enzyme
           E2-18 kDa, putative [Ricinus communis]
          Length = 161

 Score =  325 bits (833), Expect = 8e-87
 Identities = 152/161 (94%), Positives = 158/161 (98%)
 Frame = +3

Query: 93  MTSSSAPSRKALSKIACSRLQKELVEWQVSPPAGFKHKVTDNLQRWVIEVVGAPGTLYAN 272
           MTSSSA SRKALSKIAC+RLQKELVEWQV+PP+GFKHKVTDNLQRWVIEV+GAPGTLYAN
Sbjct: 1   MTSSSAASRKALSKIACNRLQKELVEWQVNPPSGFKHKVTDNLQRWVIEVIGAPGTLYAN 60

Query: 273 ETYQLQVDFPEHYPMEAPQVIFLNPAPLHPHVYSNGHICLDILYDSWSPAMTVSSVCISI 452
           ETYQLQVDFPEHYPMEAPQVIFL+PAP HPH+YSNGHICLDILYDSWSPAMTVSSVCISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPPHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 453 LSMLSSSTVKQRPVDNDRYVKNCRNGRSPKETRWWFHDDKV 575
           LSMLSSSTVKQRP DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161


>ref|XP_002327679.1| predicted protein [Populus trichocarpa] gi|222836764|gb|EEE75157.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  325 bits (832), Expect = 1e-86
 Identities = 151/161 (93%), Positives = 157/161 (97%)
 Frame = +3

Query: 93  MTSSSAPSRKALSKIACSRLQKELVEWQVSPPAGFKHKVTDNLQRWVIEVVGAPGTLYAN 272
           MTSSS  +RKALSKIAC+RLQKELVEWQV+PP GFKHKVTDNLQRWVIEV+GAPGTLYAN
Sbjct: 1   MTSSSTTTRKALSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVIGAPGTLYAN 60

Query: 273 ETYQLQVDFPEHYPMEAPQVIFLNPAPLHPHVYSNGHICLDILYDSWSPAMTVSSVCISI 452
           ETYQLQVDFPEHYPMEAPQVIFL+PAPLHPH+YSNGHICLDILYDSWSPAMTVSSVCISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 453 LSMLSSSTVKQRPVDNDRYVKNCRNGRSPKETRWWFHDDKV 575
           LSMLSSSTVKQRP DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161


>ref|XP_002274933.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Vitis
           vinifera] gi|297735076|emb|CBI17438.3| unnamed protein
           product [Vitis vinifera]
          Length = 161

 Score =  323 bits (828), Expect = 3e-86
 Identities = 151/161 (93%), Positives = 157/161 (97%)
 Frame = +3

Query: 93  MTSSSAPSRKALSKIACSRLQKELVEWQVSPPAGFKHKVTDNLQRWVIEVVGAPGTLYAN 272
           MTSSSA SRKALSKIAC+RLQKELVEWQV+PPAGFKHKVTDNLQRWVIEV GAPGTLYAN
Sbjct: 1   MTSSSATSRKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVHGAPGTLYAN 60

Query: 273 ETYQLQVDFPEHYPMEAPQVIFLNPAPLHPHVYSNGHICLDILYDSWSPAMTVSSVCISI 452
           E+YQLQVDFPEHYPMEAPQVIFL PAPLHPH+YSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ESYQLQVDFPEHYPMEAPQVIFLQPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 453 LSMLSSSTVKQRPVDNDRYVKNCRNGRSPKETRWWFHDDKV 575
           LSMLSSSTVKQRP DNDRYV+NCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVRNCRNGRSPKETRWWFHDDKV 161


>ref|XP_002310827.1| predicted protein [Populus trichocarpa] gi|222853730|gb|EEE91277.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  322 bits (826), Expect = 5e-86
 Identities = 150/161 (93%), Positives = 156/161 (96%)
 Frame = +3

Query: 93  MTSSSAPSRKALSKIACSRLQKELVEWQVSPPAGFKHKVTDNLQRWVIEVVGAPGTLYAN 272
           MTSSSA +RKALSKIAC+RLQKELVEWQV+PP GFKHKVTDNLQRWVIEV+GAPGTLYAN
Sbjct: 1   MTSSSATTRKALSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVIGAPGTLYAN 60

Query: 273 ETYQLQVDFPEHYPMEAPQVIFLNPAPLHPHVYSNGHICLDILYDSWSPAMTVSSVCISI 452
           ETYQLQVDFPEHYPMEAPQVIFL+PAPLHPH+YSNGHICLDILYDSWSPAMTVSSVCISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 453 LSMLSSSTVKQRPVDNDRYVKNCRNGRSPKETRWWFHDDKV 575
           LSMLSSS  KQRP DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPAKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161


>ref|XP_002280882.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 18 [Vitis
           vinifera] gi|147844523|emb|CAN82081.1| hypothetical
           protein VITISV_011314 [Vitis vinifera]
           gi|302142559|emb|CBI19762.3| unnamed protein product
           [Vitis vinifera]
          Length = 161

 Score =  322 bits (824), Expect = 9e-86
 Identities = 149/161 (92%), Positives = 157/161 (97%)
 Frame = +3

Query: 93  MTSSSAPSRKALSKIACSRLQKELVEWQVSPPAGFKHKVTDNLQRWVIEVVGAPGTLYAN 272
           MTSSSAPSRK LSKIAC+RLQKELVEWQV+PPAGFKHKVTDNLQRWVIEV GAPGTLYAN
Sbjct: 1   MTSSSAPSRKVLSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 273 ETYQLQVDFPEHYPMEAPQVIFLNPAPLHPHVYSNGHICLDILYDSWSPAMTVSSVCISI 452
           E+YQLQVDFPE+YPMEAPQV+F+ PAPLHPH+YSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ESYQLQVDFPENYPMEAPQVVFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 453 LSMLSSSTVKQRPVDNDRYVKNCRNGRSPKETRWWFHDDKV 575
           LSMLSSSTVKQRP DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPADNDRYVKNCRNGRSPKETRWWFHDDKV 161


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