BLASTX nr result

ID: Dioscorea21_contig00003332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003332
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADR71284.1| 40S ribosomal protein S16B [Hevea brasiliensis]        117   1e-24
gb|ADR71285.1| 40S ribosomal protein S16C [Hevea brasiliensis]        115   3e-24
gb|ADR71283.1| 40S ribosomal protein S16A [Hevea brasiliensis]        115   3e-24
ref|NP_001235533.1| uncharacterized protein LOC100527911 [Glycin...   115   5e-24
ref|XP_002314714.1| predicted protein [Populus trichocarpa] gi|1...   114   8e-24

>gb|ADR71284.1| 40S ribosomal protein S16B [Hevea brasiliensis]
          Length = 146

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/65 (86%), Positives = 61/65 (93%)
 Frame = +2

Query: 29  MAAPAPKESVQCFGRKKTAVAVTYCKRGRGLIKVNGVPIELVKPEILRYKAFEPVLLLGR 208
           MAA AP ESVQCFGRKKTAVAVTYCKRGRGLIK+NG PIELV+PEILR+KA+EP+LLLGR
Sbjct: 1   MAASAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGR 60

Query: 209 SRFAG 223
            RFAG
Sbjct: 61  HRFAG 65


>gb|ADR71285.1| 40S ribosomal protein S16C [Hevea brasiliensis]
          Length = 146

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/65 (84%), Positives = 60/65 (92%)
 Frame = +2

Query: 29  MAAPAPKESVQCFGRKKTAVAVTYCKRGRGLIKVNGVPIELVKPEILRYKAFEPVLLLGR 208
           MAA AP ESVQCFGRKKTAVAVTYCKRGRGLIK+NG PIELV+PEI R+KA+EP+LLLGR
Sbjct: 1   MAASAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEIFRFKAYEPILLLGR 60

Query: 209 SRFAG 223
            RFAG
Sbjct: 61  HRFAG 65


>gb|ADR71283.1| 40S ribosomal protein S16A [Hevea brasiliensis]
          Length = 147

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/66 (86%), Positives = 62/66 (93%), Gaps = 1/66 (1%)
 Frame = +2

Query: 29  MAAPA-PKESVQCFGRKKTAVAVTYCKRGRGLIKVNGVPIELVKPEILRYKAFEPVLLLG 205
           MAAPA P ESVQCFGRKKTAVAVTYCKRGRGLIK+NG PIELV+PEILR+KA+EP+LLLG
Sbjct: 1   MAAPAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLG 60

Query: 206 RSRFAG 223
           R RFAG
Sbjct: 61  RHRFAG 66


>ref|NP_001235533.1| uncharacterized protein LOC100527911 [Glycine max]
           gi|255633528|gb|ACU17122.1| unknown [Glycine max]
          Length = 157

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/64 (85%), Positives = 59/64 (92%)
 Frame = +2

Query: 32  AAPAPKESVQCFGRKKTAVAVTYCKRGRGLIKVNGVPIELVKPEILRYKAFEPVLLLGRS 211
           AAPA  E VQCFGRKKTAVAVTYCKRGRGLIK+NG PIELV+PEILR+KAFEP+LLLGR 
Sbjct: 13  AAPAAIEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRH 72

Query: 212 RFAG 223
           RFAG
Sbjct: 73  RFAG 76


>ref|XP_002314714.1| predicted protein [Populus trichocarpa] gi|118481485|gb|ABK92685.1|
           unknown [Populus trichocarpa]
           gi|222863754|gb|EEF00885.1| predicted protein [Populus
           trichocarpa]
          Length = 144

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/61 (86%), Positives = 59/61 (96%)
 Frame = +2

Query: 41  APKESVQCFGRKKTAVAVTYCKRGRGLIKVNGVPIELVKPEILRYKAFEPVLLLGRSRFA 220
           APKESVQCFGRKKTAVAVT+CKRGRGLIK+NG PIELV+PEILR+KA+EP+LLLGR RFA
Sbjct: 3   APKESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRQRFA 62

Query: 221 G 223
           G
Sbjct: 63  G 63


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