BLASTX nr result

ID: Dioscorea21_contig00003322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003322
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ04737.1| hypothetical protein OsI_26898 [Oryza sativa Indi...   159   5e-37
ref|NP_001060298.1| Os07g0620200 [Oryza sativa Japonica Group] g...   158   7e-37
ref|XP_003562673.1| PREDICTED: uncharacterized protein LOC100846...   152   5e-35
gb|ACF81242.1| unknown [Zea mays] gi|413955363|gb|AFW88012.1| he...   148   7e-34
ref|NP_001132145.1| AT hook-containing MAR binding 1-like protei...   148   9e-34

>gb|EAZ04737.1| hypothetical protein OsI_26898 [Oryza sativa Indica Group]
          Length = 396

 Score =  159 bits (401), Expect = 5e-37
 Identities = 93/248 (37%), Positives = 128/248 (51%), Gaps = 51/248 (20%)
 Frame = +2

Query: 17  SSPTNASPFWTACPACCHVHQYAREYLDRNLRCPS--CSQVFQAKALPEPPPIVPGTDSY 190
           +S   A  FWTACP CCHV+QY R  + R LRCP   C + F A  +P  PPIVPGTD Y
Sbjct: 143 ASAAAADAFWTACPYCCHVYQYQRALMGRALRCPGAGCRRAFVATEIPAAPPIVPGTDMY 202

Query: 191 FCSWAFFPIGFP-SSPIDSHWKPFIPFFPQNPDS--NTPKDP-----------------N 310
           +C+W F+P+GFP ++ + ++WKPF P +P N  S    P D                  N
Sbjct: 203 YCAWGFYPMGFPKAADLSTNWKPFCPMYPWNSSSPQQAPADAGNVSKQNVESNGGNVNIN 262

Query: 311 FSPNSRDATFSEKNGDAPATG---GTGRSKK-VARKKVGGNMRKKVL------------- 439
            +    +A  + K+G +   G     GR KK  ARKKVGG  +K                
Sbjct: 263 VNTPLSNAQPANKSGASSGVGVGPSRGRIKKTTARKKVGGGFKKNASVGVESGIEPSLLG 322

Query: 440 ---------TSEAIKATGININEVAGGGPEEKSM---TEDDVEFHIDLDSTEELLGNLQN 583
                    +   + A GININEVA G      M    ++++ F +D+D+T+ +LGNLQ+
Sbjct: 323 PDSWNGVAESGSMVGARGININEVAKGTDGSSMMHFGGDEEIGFDLDVDATDAILGNLQH 382

Query: 584 LPFLKDDE 607
           LPFL+DD+
Sbjct: 383 LPFLRDDD 390


>ref|NP_001060298.1| Os07g0620200 [Oryza sativa Japonica Group]
           gi|22296361|dbj|BAC10131.1| AHM1(AT hook-containing MAR
           binding protein1)-like protein [Oryza sativa Japonica
           Group] gi|22296407|dbj|BAC10175.1| AHM1(AT
           hook-containing MAR binding protein1)-like protein
           [Oryza sativa Japonica Group]
           gi|113611834|dbj|BAF22212.1| Os07g0620200 [Oryza sativa
           Japonica Group] gi|125601111|gb|EAZ40687.1| hypothetical
           protein OsJ_25155 [Oryza sativa Japonica Group]
          Length = 396

 Score =  158 bits (400), Expect = 7e-37
 Identities = 93/248 (37%), Positives = 128/248 (51%), Gaps = 51/248 (20%)
 Frame = +2

Query: 17  SSPTNASPFWTACPACCHVHQYAREYLDRNLRCPS--CSQVFQAKALPEPPPIVPGTDSY 190
           +S   A  FWTACP CCHV+QY R  + R LRCP   C + F A  +P  PPIVPGTD Y
Sbjct: 143 ASAAAADAFWTACPYCCHVYQYQRALMGRALRCPGAGCRRAFVATEIPAAPPIVPGTDMY 202

Query: 191 FCSWAFFPIGFP-SSPIDSHWKPFIPFFPQNPDS--NTPKDP-----------------N 310
           +C+W F+P+GFP ++ + ++WKPF P +P N  S    P D                  N
Sbjct: 203 YCAWGFYPMGFPKAADLSTNWKPFCPMYPWNLSSPQQAPADAGNVSKQNVESNGGNVNIN 262

Query: 311 FSPNSRDATFSEKNGDAPATG---GTGRSKK-VARKKVGGNMRKKVL------------- 439
            +    +A  + K+G +   G     GR KK  ARKKVGG  +K                
Sbjct: 263 VNTPPSNAQPANKSGASSGVGVGPSRGRIKKTTARKKVGGGFKKNASGGVESGIEPSLLG 322

Query: 440 ---------TSEAIKATGININEVAGGGPEEKSM---TEDDVEFHIDLDSTEELLGNLQN 583
                    +   + A GININEVA G      M    ++++ F +D+D+T+ +LGNLQ+
Sbjct: 323 PDSWNGVAESGSMVGARGININEVAKGTDGSSMMHFGGDEEIGFDLDVDATDAILGNLQH 382

Query: 584 LPFLKDDE 607
           LPFL+DD+
Sbjct: 383 LPFLRDDD 390


>ref|XP_003562673.1| PREDICTED: uncharacterized protein LOC100846684 [Brachypodium
           distachyon]
          Length = 397

 Score =  152 bits (384), Expect = 5e-35
 Identities = 90/241 (37%), Positives = 128/241 (53%), Gaps = 49/241 (20%)
 Frame = +2

Query: 32  ASPFWTACPACCHVHQYAREYLDRNLRCPS--CSQVFQAKALPEPPPIVPGTDSYFCSWA 205
           A  FWT CP CCHVHQY R  + R LRCPS  C + F A  +P  PPIVPGT+ Y+ +W 
Sbjct: 153 ADTFWTVCPNCCHVHQYQRALVGRTLRCPSAGCRRAFVASEIPSAPPIVPGTNLYYSAWG 212

Query: 206 FFPIGFP-SSPIDSHWKPFIPFFPQNPDSNTPKDPNFSPNSRDATFSEKNG--------- 355
           F P+GFP ++ + ++WKPF P FP+  DS+ P+    + ++      E NG         
Sbjct: 213 FVPMGFPKAADLTTNWKPFCPMFPR--DSSAPQPAYAATDNVSKQNVENNGGHTNANIPP 270

Query: 356 ------DAPATGGTGR-------SKKVARKKVGGNMRK------------KVLTSEAIK- 457
                 +  A GGTG         K  ARKKVG  ++K             +L S+  + 
Sbjct: 271 SAANPSNKSAGGGTGSGPPRGRIKKTTARKKVGAGIKKHASGGVESGIEPSLLGSDGSEN 330

Query: 458 --------ATGININEVA---GGGPEEKSMTEDDVEFHIDLDSTEELLGNLQNLPFLKDD 604
                   + GININEVA    G    +   ++D+ F +D+D+T+++LGNL NLPFL++D
Sbjct: 331 AGNGLTGSSRGININEVAKATDGSSVLRFGGDEDIGFDLDVDATDDILGNLHNLPFLRED 390

Query: 605 E 607
           +
Sbjct: 391 D 391


>gb|ACF81242.1| unknown [Zea mays] gi|413955363|gb|AFW88012.1| heat shock protein
           binding protein [Zea mays]
          Length = 397

 Score =  148 bits (374), Expect = 7e-34
 Identities = 89/224 (39%), Positives = 117/224 (52%), Gaps = 36/224 (16%)
 Frame = +2

Query: 41  FWTACPACCHVHQYAREYLDRNLRCPS--CSQVFQAKALPEPPPIVPGTDSYFCSWAFFP 214
           FWTACP CC+VHQY R+ + R L+CP+  C + F A  +P PP +VPGTD Y C+W FFP
Sbjct: 169 FWTACPFCCYVHQYPRDLVGRALKCPNEGCRRGFVASEIPTPPTVVPGTDMYHCAWGFFP 228

Query: 215 IGFPSSP-IDSHWKPFIPFFPQNPDSNTPKDPNFSPNSRDATFSEKNGDAPATGGTGRSK 391
           +GFP++  + ++WKPF   FP N   +       S  +R    ++ N  A      GR K
Sbjct: 229 LGFPNAADLGANWKPFYKAFPWNTAPSGQGADGRSHGNRGGRQAQ-NDSARGGSSRGRIK 287

Query: 392 KV-ARKKVGGNMRKKVL-------------------------TSEAIKATGININEVA-- 487
           K  ARKKVG  +R++ L                              +  GININE A  
Sbjct: 288 KTTARKKVGAGLRRRSLGGGVESGIDSSMLGQEGWAGDEDGGDGRTEEVRGININEAAQA 347

Query: 488 --GGGPEEKSMT---EDDVEFHIDLDSTEELLGNLQNLPFLKDD 604
             G G    S     ED   FHID+D+TE++LGNL NLPFL+ D
Sbjct: 348 TDGTGRVNVSGAGGVEDMGNFHIDVDATEDILGNLHNLPFLRVD 391


>ref|NP_001132145.1| AT hook-containing MAR binding 1-like protein [Zea mays]
           gi|55741112|gb|AAV64250.1| AT hook-containing MAR
           binding 1-like protein [Zea mays]
           gi|414887622|tpg|DAA63636.1| TPA: AT hook-containing MAR
           binding 1-like protein [Zea mays]
          Length = 442

 Score =  148 bits (373), Expect = 9e-34
 Identities = 88/259 (33%), Positives = 127/259 (49%), Gaps = 58/259 (22%)
 Frame = +2

Query: 2   ISNERSSPTNASPFWTACPACCHVHQYAREYLDRNLRCPS--CSQVFQAKALPEPPPIVP 175
           +S +  +  + + FWT CP CCHV+QY R  + R LRC S  C + F+A  +P  PPIVP
Sbjct: 177 VSGDALASADGNAFWTVCPYCCHVYQYQRALVGRALRCQSAGCRRAFEATEIPNAPPIVP 236

Query: 176 GTDSYFCSWAFFPIGFP-SSPIDSHWKPFIPFFPQNPDS--------------------- 289
           GTD Y+C+W FFP+GFP ++ + ++W+PF P FP N +S                     
Sbjct: 237 GTDMYYCAWGFFPMGFPKAADLSTNWRPFCPMFPGNSESPLQPAPAVTVNVDVQNLENNG 296

Query: 290 --------NTPKDPNFSPNSRDATFSEKNGDAPATGGTGRSKK-VARKKVGGNMRK---- 430
                   N   D N +P S        + D  A    GR KK  ARKKVG   +K    
Sbjct: 297 GTDVQNVENNGIDDNSTPASVQPPGKSGDIDRAAGPSRGRMKKTTARKKVGAVSKKHSSS 356

Query: 431 --------KVLTSEAIKATG----------ININEVAGGGPEEKSMT---EDDVEFHIDL 547
                    +L ++++              ININEVA        +    ++D+ F +D+
Sbjct: 357 GVDSGIEPSMLGADSLNGNAGSGQTVGTREININEVAMPTDSATMLNFGGDEDIRFDLDV 416

Query: 548 DSTEELLGNLQNLPFLKDD 604
           D+T+ +LGNL NLPFL++D
Sbjct: 417 DATDAILGNLHNLPFLRED 435


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