BLASTX nr result

ID: Dioscorea21_contig00003320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003320
         (736 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABX10439.1| 3-ketoacyl-CoA synthase 3 [Gossypium hirsutum]         312   4e-83
ref|XP_004152899.1| PREDICTED: 3-ketoacyl-CoA synthase 12-like [...   311   1e-82
ref|NP_180431.1| 3-ketoacyl-CoA synthase 12 [Arabidopsis thalian...   311   1e-82
ref|XP_002276028.1| PREDICTED: 3-ketoacyl-CoA synthase 12-like [...   310   2e-82
gb|AAM61290.1| putative fatty acid elongase [Arabidopsis thaliana]    310   2e-82

>gb|ABX10439.1| 3-ketoacyl-CoA synthase 3 [Gossypium hirsutum]
          Length = 466

 Score =  312 bits (800), Expect = 4e-83
 Identities = 152/253 (60%), Positives = 190/253 (75%), Gaps = 8/253 (3%)
 Frame = +2

Query: 2   RIVNKFKMRDDIKIYNLSGMGCSASLISIDLIRRTFMSQFNKLALIFTSESITPNWYSGN 181
           RI+N +KMR DIK +NL+GMGCSASLIS+D++R  F S  NK AL+ TSES++PNWY+GN
Sbjct: 147 RIINHYKMRQDIKCFNLTGMGCSASLISLDIVRNVFKSYKNKYALLVTSESLSPNWYAGN 206

Query: 182 NRSMMLANCLFRCGGCAMLLTNDPKRKNQAKLKLRHLIRTDLGANDEAFNCAYETEDELG 361
           +RSM+LANCLFR GGCA+LLTN+   K++A  KL+ L+RT  GA DE++NC  + EDE+G
Sbjct: 207 DRSMILANCLFRSGGCAILLTNNKSLKHRAMFKLKCLVRTHHGARDESYNCCIQREDEIG 266

Query: 362 HTGMCLSKDLPKAAALAFVQNLKTLAPKVLPVTELVRFVMAGIY--------XXXXXXXX 517
             G  L K+LPKAA  +FV NL+ + PK+LPVTELVRF++  +                 
Sbjct: 267 KVGFYLGKNLPKAATRSFVDNLRVITPKILPVTELVRFMVVSLVKKWNRHGSTKGTTTQG 326

Query: 518 XXXXXVNFKAGIDHFVIHSGGAAVIDGVGKSLRLSEWDLEPARMTLHRFGNTSASSIWYA 697
                VNFK+G+DHF IH+GG AVIDG+G SL L+E+DLEPARMTLHRFGNTSASS+WY 
Sbjct: 327 PIKAGVNFKSGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSASSLWYV 386

Query: 698 LGYMEAKKRLKKG 736
           L YMEAKKRLKKG
Sbjct: 387 LAYMEAKKRLKKG 399


>ref|XP_004152899.1| PREDICTED: 3-ketoacyl-CoA synthase 12-like [Cucumis sativus]
          Length = 462

 Score =  311 bits (796), Expect = 1e-82
 Identities = 151/248 (60%), Positives = 187/248 (75%), Gaps = 4/248 (1%)
 Frame = +2

Query: 5   IVNKFKMRDDIKIYNLSGMGCSASLISIDLIRRTFMSQFNKLALIFTSESITPNWYSGNN 184
           ++NKFKMR+DIK++NLSGMGCSASLIS+D++RR F S  N   ++ TSES+TPNWYSGN+
Sbjct: 148 LINKFKMREDIKVFNLSGMGCSASLISMDVMRRMFKSHMNSYGIVVTSESLTPNWYSGND 207

Query: 185 RSMMLANCLFRCGGCAMLLTNDPKRKNQAKLKLRHLIRTDLGANDEAFNCAYETEDELGH 364
           RSM+LANCLFR GG A+LLTN    KN+A LKL+ L+RT  GA DE+++C Y+ ED+ GH
Sbjct: 208 RSMILANCLFRTGGAAILLTNKRSLKNKAMLKLKCLVRTHHGAQDESYDCCYQKEDDQGH 267

Query: 365 TGMCLSKDLPKAAALAFVQNLKTLAPKVLPVTELVRF----VMAGIYXXXXXXXXXXXXX 532
            G+ L K+LP+AA  AF  NL+ +APK+LP+TE+ R     ++  I              
Sbjct: 268 LGIHLGKNLPRAAIRAFTDNLREIAPKILPITEIFRLTILTIIHKISLASSSKPRWPKPM 327

Query: 533 VNFKAGIDHFVIHSGGAAVIDGVGKSLRLSEWDLEPARMTLHRFGNTSASSIWYALGYME 712
            NFK G +HF IH+GG AVIDGVGK L L+E DLEPARMTLHRFGNTSASS+WY LGYME
Sbjct: 328 ANFKTGAEHFCIHTGGKAVIDGVGKGLNLTEHDLEPARMTLHRFGNTSASSLWYVLGYME 387

Query: 713 AKKRLKKG 736
           AKKRLKKG
Sbjct: 388 AKKRLKKG 395


>ref|NP_180431.1| 3-ketoacyl-CoA synthase 12 [Arabidopsis thaliana]
           gi|75206074|sp|Q9SIB2.1|KCS12_ARATH RecName:
           Full=3-ketoacyl-CoA synthase 12; Short=KCS-12; AltName:
           Full=Very long-chain fatty acid condensing enzyme 12;
           Short=VLCFA condensing enzyme 12; Flags: Precursor
           gi|4580394|gb|AAD24372.1| putative fatty acid elongase
           [Arabidopsis thaliana] gi|15810263|gb|AAL07019.1|
           putative fatty acid elongase [Arabidopsis thaliana]
           gi|20259583|gb|AAM14134.1| putative fatty acid elongase
           [Arabidopsis thaliana] gi|330253058|gb|AEC08152.1|
           3-ketoacyl-CoA synthase 12 [Arabidopsis thaliana]
          Length = 476

 Score =  311 bits (796), Expect = 1e-82
 Identities = 149/257 (57%), Positives = 190/257 (73%), Gaps = 12/257 (4%)
 Frame = +2

Query: 2   RIVNKFKMRDDIKIYNLSGMGCSASLISIDLIRRTFMSQFNKLALIFTSESITPNWYSGN 181
           RI+N +KMRDD+K++NL+GMGCSASLIS+D+++  F S  NKLAL+ TSES++PNWYSGN
Sbjct: 147 RIINHYKMRDDVKVFNLTGMGCSASLISVDIVKNIFKSYANKLALVATSESLSPNWYSGN 206

Query: 182 NRSMMLANCLFRCGGCAMLLTNDPKRKNQAKLKLRHLIRTDLGANDEAFNCAYETEDELG 361
           NRSM+LANCLFR GGCA+LLTN    + +A  KL+ ++RT  GA +E++NC  + EDE G
Sbjct: 207 NRSMILANCLFRSGGCAILLTNKRSLRKKAMFKLKCMVRTHHGAREESYNCCIQAEDEQG 266

Query: 362 HTGMCLSKDLPKAAALAFVQNLKTLAPKVLPVTELVRFVMAGIY------------XXXX 505
             G  L K+LPKAA  AFV+NLK + PK+LPVTEL+RF++  +                 
Sbjct: 267 RVGFYLGKNLPKAATRAFVENLKVITPKILPVTELIRFMLKLLIKKIKIRQNPSKGSTNL 326

Query: 506 XXXXXXXXXVNFKAGIDHFVIHSGGAAVIDGVGKSLRLSEWDLEPARMTLHRFGNTSASS 685
                    +NFK GI+HF IH+GG AVIDG+G SL L+E+D+EPARMTLHRFGNTSASS
Sbjct: 327 PPGTPLKAGINFKTGIEHFCIHTGGKAVIDGIGHSLDLNEYDIEPARMTLHRFGNTSASS 386

Query: 686 IWYALGYMEAKKRLKKG 736
           +WY L YMEAKKRLK+G
Sbjct: 387 LWYVLAYMEAKKRLKRG 403


>ref|XP_002276028.1| PREDICTED: 3-ketoacyl-CoA synthase 12-like [Vitis vinifera]
          Length = 460

 Score =  310 bits (794), Expect = 2e-82
 Identities = 151/245 (61%), Positives = 189/245 (77%)
 Frame = +2

Query: 2   RIVNKFKMRDDIKIYNLSGMGCSASLISIDLIRRTFMSQFNKLALIFTSESITPNWYSGN 181
           RI+N +KMR+DIK +NLSGMGCSASLISIDL+RR F S+ N LA++ TSESI PNWYSGN
Sbjct: 151 RIINHYKMRNDIKAFNLSGMGCSASLISIDLVRRIFNSRKNSLAIVVTSESIAPNWYSGN 210

Query: 182 NRSMMLANCLFRCGGCAMLLTNDPKRKNQAKLKLRHLIRTDLGANDEAFNCAYETEDELG 361
           ++SM+L+NCLFR GGC++LLTN+   K+Q+ LKL+ LIRT +G++DEA +C  + ED+LG
Sbjct: 211 DKSMILSNCLFRSGGCSILLTNNKALKDQSLLKLKCLIRTHMGSSDEAHSCCMQKEDDLG 270

Query: 362 HTGMCLSKDLPKAAALAFVQNLKTLAPKVLPVTELVRFVMAGIYXXXXXXXXXXXXXVNF 541
             G  LSK +PKAA  AF +N++ LAPK LP+ EL+R+     +             +NF
Sbjct: 271 RKGFHLSKSVPKAANQAFTENIRELAPKALPLRELLRYTAVSTF--FHYTKGGFKAKLNF 328

Query: 542 KAGIDHFVIHSGGAAVIDGVGKSLRLSEWDLEPARMTLHRFGNTSASSIWYALGYMEAKK 721
           K G+DHF +H GG A+IDGV KSL LSE D+EPARMTLHRFGNTSASS+WY LGYMEAKK
Sbjct: 329 KTGVDHFCLHPGGTAMIDGVAKSLELSESDMEPARMTLHRFGNTSASSVWYVLGYMEAKK 388

Query: 722 RLKKG 736
           RLKKG
Sbjct: 389 RLKKG 393


>gb|AAM61290.1| putative fatty acid elongase [Arabidopsis thaliana]
          Length = 476

 Score =  310 bits (794), Expect = 2e-82
 Identities = 149/257 (57%), Positives = 189/257 (73%), Gaps = 12/257 (4%)
 Frame = +2

Query: 2   RIVNKFKMRDDIKIYNLSGMGCSASLISIDLIRRTFMSQFNKLALIFTSESITPNWYSGN 181
           RI+N +KMRDD+K++NL+GMGCSASLIS+D+++  F S  NKLAL+ TSES++PNWYSGN
Sbjct: 147 RIINHYKMRDDVKVFNLTGMGCSASLISVDIVKNIFKSYANKLALVATSESLSPNWYSGN 206

Query: 182 NRSMMLANCLFRCGGCAMLLTNDPKRKNQAKLKLRHLIRTDLGANDEAFNCAYETEDELG 361
           NRSM+LANCLFR GGCA+LLTN    + +A  KL+ ++RT  GA +E++NC  + EDE G
Sbjct: 207 NRSMILANCLFRSGGCAILLTNKRSLRKKAMFKLKCMVRTHHGAREESYNCCIQAEDEQG 266

Query: 362 HTGMCLSKDLPKAAALAFVQNLKTLAPKVLPVTELVRFVMAGIY------------XXXX 505
             G  L K+LPKAA  AFV NLK + PK+LPVTEL+RF++  +                 
Sbjct: 267 RVGFYLGKNLPKAATRAFVDNLKVITPKILPVTELIRFMLKLLIKKIKIRQNPSXGSTNL 326

Query: 506 XXXXXXXXXVNFKAGIDHFVIHSGGAAVIDGVGKSLRLSEWDLEPARMTLHRFGNTSASS 685
                    +NFK GI+HF IH+GG AVIDG+G SL L+E+D+EPARMTLHRFGNTSASS
Sbjct: 327 PPGTPLKAGINFKTGIEHFCIHTGGKAVIDGIGHSLDLNEYDIEPARMTLHRFGNTSASS 386

Query: 686 IWYALGYMEAKKRLKKG 736
           +WY L YMEAKKRLK+G
Sbjct: 387 LWYVLAYMEAKKRLKRG 403


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