BLASTX nr result

ID: Dioscorea21_contig00003310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003310
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518703.1| PREDICTED: 40S ribosomal protein S16-like [G...    98   8e-19
ref|XP_003529404.1| PREDICTED: 40S ribosomal protein S16-like [G...    98   8e-19
sp|P16149.1|RS16_LUPPO RecName: Full=40S ribosomal protein S16 g...    98   8e-19
gb|ABK23888.1| unknown [Picea sitchensis] gi|386277679|gb|AFJ044...    98   1e-18
gb|ADR71285.1| 40S ribosomal protein S16C [Hevea brasiliensis]         97   1e-18

>ref|XP_003518703.1| PREDICTED: 40S ribosomal protein S16-like [Glycine max]
          Length = 156

 Score = 98.2 bits (243), Expect = 8e-19
 Identities = 57/96 (59%), Positives = 59/96 (61%)
 Frame = -1

Query: 563 RSRFAGVDMRIRVRGGGKTSQIYAIRQSIAKALVAFYQKYVXXXXXXXXXXXXXXXXXXX 384
           +SRFAGVDMRIRV+GGG TSQIYAIRQSIAKALVAFYQKYV                   
Sbjct: 70  KSRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYV---------DEQSKKEIKD 120

Query: 383 XXXXXXXXXXXXXXXXXEPKKFGGRGARARFQKSYR 276
                            EPKKFGGRGARARFQKSYR
Sbjct: 121 ILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 156


>ref|XP_003529404.1| PREDICTED: 40S ribosomal protein S16-like [Glycine max]
          Length = 156

 Score = 98.2 bits (243), Expect = 8e-19
 Identities = 57/96 (59%), Positives = 59/96 (61%)
 Frame = -1

Query: 563 RSRFAGVDMRIRVRGGGKTSQIYAIRQSIAKALVAFYQKYVXXXXXXXXXXXXXXXXXXX 384
           +SRFAGVDMRIRV+GGG TSQIYAIRQSIAKALVAFYQKYV                   
Sbjct: 70  KSRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYV---------DEQSKKEIKD 120

Query: 383 XXXXXXXXXXXXXXXXXEPKKFGGRGARARFQKSYR 276
                            EPKKFGGRGARARFQKSYR
Sbjct: 121 ILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 156


>sp|P16149.1|RS16_LUPPO RecName: Full=40S ribosomal protein S16 gi|19512|emb|CAA36068.1|
           unnamed protein product [Lupinus polyphyllus]
          Length = 145

 Score = 98.2 bits (243), Expect = 8e-19
 Identities = 57/96 (59%), Positives = 59/96 (61%)
 Frame = -1

Query: 563 RSRFAGVDMRIRVRGGGKTSQIYAIRQSIAKALVAFYQKYVXXXXXXXXXXXXXXXXXXX 384
           +SRFAGVDMRIRV+GGG TSQIYAIRQSIAKALVAFYQKYV                   
Sbjct: 59  KSRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYV---------DEQSKKEIKD 109

Query: 383 XXXXXXXXXXXXXXXXXEPKKFGGRGARARFQKSYR 276
                            EPKKFGGRGARARFQKSYR
Sbjct: 110 ILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 145


>gb|ABK23888.1| unknown [Picea sitchensis] gi|386277679|gb|AFJ04416.1| putative
           ribosomal S16 [Picea wilsonii]
          Length = 143

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 57/96 (59%), Positives = 58/96 (60%)
 Frame = -1

Query: 563 RSRFAGVDMRIRVRGGGKTSQIYAIRQSIAKALVAFYQKYVXXXXXXXXXXXXXXXXXXX 384
           R RFAGVDMRIRV+GGG TSQIYAIRQSIAKALVAFYQKYV                   
Sbjct: 57  RQRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYV---------DEQSKKEIKD 107

Query: 383 XXXXXXXXXXXXXXXXXEPKKFGGRGARARFQKSYR 276
                            EPKKFGGRGARARFQKSYR
Sbjct: 108 ILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 143


>gb|ADR71285.1| 40S ribosomal protein S16C [Hevea brasiliensis]
          Length = 146

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 57/96 (59%), Positives = 58/96 (60%)
 Frame = -1

Query: 563 RSRFAGVDMRIRVRGGGKTSQIYAIRQSIAKALVAFYQKYVXXXXXXXXXXXXXXXXXXX 384
           R RFAGVDMRIRV+GGG TSQIYAIRQSIAKALVAFYQKYV                   
Sbjct: 60  RHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYV---------DEQSKKEIKD 110

Query: 383 XXXXXXXXXXXXXXXXXEPKKFGGRGARARFQKSYR 276
                            EPKKFGGRGARARFQKSYR
Sbjct: 111 ILVSYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 146


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