BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003300
         (1095 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604303.1| DNA-directed RNA polymerase [Medicago trunca...    58   4e-06

>ref|XP_003604303.1| DNA-directed RNA polymerase [Medicago truncatula]
           gi|355505358|gb|AES86500.1| DNA-directed RNA polymerase
           [Medicago truncatula]
          Length = 379

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
 Frame = -2

Query: 989 MDDDDWTWYAFKHLALAANELISLRDPSRRVPWRKLIPP-RLHPSVXXXXXXXXXXXR-- 819
           MDDD+W   A     + AN L+S      + P   L PP  +H +V              
Sbjct: 1   MDDDNWVETAMADDTIVANFLLSFT----KKPSSPLYPPFTVHWNVQKPRSKLRRNHAVK 56

Query: 818 -DVASPQTPLEFSFNLSHGGSSAGEKRSDADG--------LILLPVTRPGVETKVEPTPP 666
              ASP TPL +S   S   ++A    + ADG        +  +  +R  V+ + E T  
Sbjct: 57  FTRASPTTPLSWSAANSASTATANTAVTLADGNEASSSRFIKSVHSSRSKVDEQTEATAY 116

Query: 665 RKPIRARKKTLPELQEEERSLLGERQGYQKLLEAKRNTLQVLVETNERLRRTKLILQLER 486
           +K IR +K++LPEL EEE+ LL ER   +  L +   T++     NE L++ KL L  ++
Sbjct: 117 KKMIR-KKRSLPELLEEEKMLLQERGNLKDKLASMNFTVERERAKNESLKKIKLDLVSQK 175

Query: 485 AAVTSEELQPRNKAVV 438
           A   +       KA+V
Sbjct: 176 ATKEARTSLVTGKAIV 191