BLASTX nr result

ID: Dioscorea21_contig00003293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003293
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER26534.1| GTP-binding family protein [Carica papaya]              67   2e-09
ref|XP_002284849.1| PREDICTED: nucleolar GTP-binding protein 2-l...    65   6e-09
emb|CAN68109.1| hypothetical protein VITISV_000763 [Vitis vinifera]    65   6e-09
gb|EAY90011.1| hypothetical protein OsI_11581 [Oryza sativa Indi...    64   1e-08
ref|XP_004142347.1| PREDICTED: nucleolar GTP-binding protein 2-l...    63   3e-08

>gb|AER26534.1| GTP-binding family protein [Carica papaya]
          Length = 567

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/83 (45%), Positives = 44/83 (53%)
 Frame = +3

Query: 3   GGEPDLTTAAKMVLHDWQRGRIPFFXXXXXXXXXXXXXXXXNASDEIEDMAISTDQXXXX 182
           GGEPDL TAAKMVLHDWQRGRIPFF                     I+  A++ +Q    
Sbjct: 432 GGEPDLMTAAKMVLHDWQRGRIPFFVPPPRQDESSEEPSVCG----IDTEAVADNQAAAA 487

Query: 183 XXXXXXXXSSQQLKHVPVQKNFF 251
                   SSQQLK VPVQ++ F
Sbjct: 488 FKAIATVMSSQQLKSVPVQRDLF 510


>ref|XP_002284849.1| PREDICTED: nucleolar GTP-binding protein 2-like [Vitis vinifera]
          Length = 530

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/83 (44%), Positives = 42/83 (50%)
 Frame = +3

Query: 3   GGEPDLTTAAKMVLHDWQRGRIPFFXXXXXXXXXXXXXXXXNASDEIEDMAISTDQXXXX 182
           GGEPDL T AKMVLHDWQRGRIPFF                    E +D A+  +Q    
Sbjct: 431 GGEPDLMTVAKMVLHDWQRGRIPFFVPPPRQQEGDSSDEPSTLGVE-KDTAVDDNQASAA 489

Query: 183 XXXXXXXXSSQQLKHVPVQKNFF 251
                   SSQQ  +VPVQK+ F
Sbjct: 490 IRAIANVISSQQTMNVPVQKDLF 512


>emb|CAN68109.1| hypothetical protein VITISV_000763 [Vitis vinifera]
          Length = 530

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/83 (44%), Positives = 42/83 (50%)
 Frame = +3

Query: 3   GGEPDLTTAAKMVLHDWQRGRIPFFXXXXXXXXXXXXXXXXNASDEIEDMAISTDQXXXX 182
           GGEPDL T AKMVLHDWQRGRIPFF                    E +D A+  +Q    
Sbjct: 431 GGEPDLMTVAKMVLHDWQRGRIPFFVPPPRQQEGDSSDEPSTLGVE-KDTAVDDNQASAA 489

Query: 183 XXXXXXXXSSQQLKHVPVQKNFF 251
                   SSQQ  +VPVQK+ F
Sbjct: 490 IRAIANVISSQQTMNVPVQKDLF 512


>gb|EAY90011.1| hypothetical protein OsI_11581 [Oryza sativa Indica Group]
          Length = 535

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/82 (42%), Positives = 43/82 (52%)
 Frame = +3

Query: 3   GGEPDLTTAAKMVLHDWQRGRIPFFXXXXXXXXXXXXXXXXNASDEIEDMAISTDQXXXX 182
           GGEPDLTT AKMVLHDWQRG+IPFF                   D+ ++  +S+D+    
Sbjct: 441 GGEPDLTTTAKMVLHDWQRGKIPFF-VPPPQQGEDSPSETAEPVDKSDEEGVSSDRTAAA 499

Query: 183 XXXXXXXXSSQQLKHVPVQKNF 248
                   SSQQ  +VP QK F
Sbjct: 500 MKAIAGIISSQQQMNVPCQKEF 521


>ref|XP_004142347.1| PREDICTED: nucleolar GTP-binding protein 2-like [Cucumis sativus]
          Length = 557

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/91 (40%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
 Frame = +3

Query: 3   GGEPDLTTAAKMVLHDWQRGRIPFFXXXXXXXXXXXXXXXXNASDEIE--------DMAI 158
           GGEPDLTTAAKMVLHDWQRG++PFF                   DE E        D  +
Sbjct: 432 GGEPDLTTAAKMVLHDWQRGKLPFF------------VPPPRVEDESEEPNYCVDDDSGV 479

Query: 159 STDQXXXXXXXXXXXXSSQQLKHVPVQKNFF 251
            ++Q            SSQQ + VPVQ++ F
Sbjct: 480 DSNQAAAAFKAIANVISSQQQRSVPVQRDLF 510


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