BLASTX nr result

ID: Dioscorea21_contig00003291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003291
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235745.1| uncharacterized protein LOC100305975 [Glycin...    98   6e-19
ref|XP_003544434.1| PREDICTED: 30S ribosomal protein S9, chlorop...    97   2e-18
ref|XP_002302464.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_002283650.1| PREDICTED: 30S ribosomal protein S9, chlorop...    96   4e-18
ref|XP_002326903.1| predicted protein [Populus trichocarpa] gi|1...    94   2e-17

>ref|NP_001235745.1| uncharacterized protein LOC100305975 [Glycine max]
           gi|255627157|gb|ACU13923.1| unknown [Glycine max]
          Length = 207

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/52 (96%), Positives = 52/52 (100%)
 Frame = -3

Query: 300 ISLGIARALLKVSENHRVPLRKEGLLTRDSRVVERKKVGLKKARKAPQYSKR 145
           ISLGIARALLKVSE+HRVPLR+EGLLTRDSRVVERKKVGLKKARKAPQYSKR
Sbjct: 156 ISLGIARALLKVSEDHRVPLRQEGLLTRDSRVVERKKVGLKKARKAPQYSKR 207


>ref|XP_003544434.1| PREDICTED: 30S ribosomal protein S9, chloroplastic-like [Glycine
           max]
          Length = 207

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 49/52 (94%), Positives = 51/52 (98%)
 Frame = -3

Query: 300 ISLGIARALLKVSENHRVPLRKEGLLTRDSRVVERKKVGLKKARKAPQYSKR 145
           ISLGIARALLKVSE+HR PLR+EGLLTRDSRVVERKKVGLKKARKAPQYSKR
Sbjct: 156 ISLGIARALLKVSEDHRAPLRQEGLLTRDSRVVERKKVGLKKARKAPQYSKR 207


>ref|XP_002302464.1| predicted protein [Populus trichocarpa] gi|222844190|gb|EEE81737.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/52 (86%), Positives = 52/52 (100%)
 Frame = -3

Query: 300 ISLGIARALLKVSENHRVPLRKEGLLTRDSRVVERKKVGLKKARKAPQYSKR 145
           ISLG+ARALLKVS+NHR+PL++EGLLTRDSR+VERKKVGLKKARKAPQ+SKR
Sbjct: 160 ISLGVARALLKVSQNHRIPLKREGLLTRDSRIVERKKVGLKKARKAPQFSKR 211


>ref|XP_002283650.1| PREDICTED: 30S ribosomal protein S9, chloroplastic [Vitis vinifera]
           gi|147855629|emb|CAN79164.1| hypothetical protein
           VITISV_019246 [Vitis vinifera]
           gi|302142422|emb|CBI19625.3| unnamed protein product
           [Vitis vinifera]
          Length = 209

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/52 (94%), Positives = 51/52 (98%)
 Frame = -3

Query: 300 ISLGIARALLKVSENHRVPLRKEGLLTRDSRVVERKKVGLKKARKAPQYSKR 145
           ISLGIARALLKVSE+HR PLRKEGLLTRDSRVVERKKVGLKKARKAPQ+SKR
Sbjct: 158 ISLGIARALLKVSEDHRGPLRKEGLLTRDSRVVERKKVGLKKARKAPQFSKR 209


>ref|XP_002326903.1| predicted protein [Populus trichocarpa] gi|118483304|gb|ABK93554.1|
           unknown [Populus trichocarpa]
           gi|222835218|gb|EEE73653.1| predicted protein [Populus
           trichocarpa]
          Length = 210

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 44/52 (84%), Positives = 52/52 (100%)
 Frame = -3

Query: 300 ISLGIARALLKVSENHRVPLRKEGLLTRDSRVVERKKVGLKKARKAPQYSKR 145
           ISLG+ARALLKVS++HR+PL++EGLLTRDSR+VERKKVGLKKARKAPQ+SKR
Sbjct: 159 ISLGVARALLKVSQDHRIPLKREGLLTRDSRIVERKKVGLKKARKAPQFSKR 210


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