BLASTX nr result

ID: Dioscorea21_contig00003269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003269
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW68788.1| hypothetical protein ZEAMMB73_032502, partial [Ze...    58   9e-07
ref|XP_002974017.1| hypothetical protein SELMODRAFT_100482 [Sela...    58   9e-07
ref|XP_002983474.1| hypothetical protein SELMODRAFT_118454 [Sela...    58   9e-07
ref|NP_001149785.1| LOC100283412 [Zea mays] gi|194696898|gb|ACF8...    58   9e-07
ref|XP_003573885.1| PREDICTED: FAM203 family protein DDB_G027686...    57   2e-06

>gb|AFW68788.1| hypothetical protein ZEAMMB73_032502, partial [Zea mays]
          Length = 302

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/33 (81%), Positives = 32/33 (96%)
 Frame = -3

Query: 165 KLEAGRRILLDPKRGLLKQIVRQFDSSSLLRKK 67
           K+EAGRRILL+PKRGLLKQI+RQFDS++ LRKK
Sbjct: 173 KVEAGRRILLEPKRGLLKQIIRQFDSTNQLRKK 205


>ref|XP_002974017.1| hypothetical protein SELMODRAFT_100482 [Selaginella moellendorffii]
           gi|300158349|gb|EFJ24972.1| hypothetical protein
           SELMODRAFT_100482 [Selaginella moellendorffii]
          Length = 534

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/45 (66%), Positives = 33/45 (73%), Gaps = 6/45 (13%)
 Frame = -1

Query: 335 VRVLDHGGWFLLRLSLHDPVLPLNIEFP------KIESFISIVVA 219
           VRV  HGGWFLLRLSLHDPVLPLNIE P      K+ SF+  VV+
Sbjct: 475 VRVSGHGGWFLLRLSLHDPVLPLNIEAPTKDAAQKLGSFVMEVVS 519


>ref|XP_002983474.1| hypothetical protein SELMODRAFT_118454 [Selaginella moellendorffii]
           gi|300148717|gb|EFJ15375.1| hypothetical protein
           SELMODRAFT_118454 [Selaginella moellendorffii]
          Length = 534

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/45 (66%), Positives = 33/45 (73%), Gaps = 6/45 (13%)
 Frame = -1

Query: 335 VRVLDHGGWFLLRLSLHDPVLPLNIEFP------KIESFISIVVA 219
           VRV  HGGWFLLRLSLHDPVLPLNIE P      K+ SF+  VV+
Sbjct: 475 VRVSGHGGWFLLRLSLHDPVLPLNIEAPTKDAAQKLGSFVMEVVS 519


>ref|NP_001149785.1| LOC100283412 [Zea mays] gi|194696898|gb|ACF82533.1| unknown [Zea
           mays] gi|195634651|gb|ACG36794.1| brain protein 16 [Zea
           mays] gi|413934238|gb|AFW68789.1| brain protein 16 [Zea
           mays]
          Length = 346

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/33 (81%), Positives = 32/33 (96%)
 Frame = -3

Query: 165 KLEAGRRILLDPKRGLLKQIVRQFDSSSLLRKK 67
           K+EAGRRILL+PKRGLLKQI+RQFDS++ LRKK
Sbjct: 173 KVEAGRRILLEPKRGLLKQIIRQFDSTNQLRKK 205


>ref|XP_003573885.1| PREDICTED: FAM203 family protein DDB_G0276861-like [Brachypodium
           distachyon]
          Length = 343

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/33 (78%), Positives = 32/33 (96%)
 Frame = -3

Query: 165 KLEAGRRILLDPKRGLLKQIVRQFDSSSLLRKK 67
           K+EAGRRIL++PKRGLLKQI+RQFDS++ LRKK
Sbjct: 172 KVEAGRRILMEPKRGLLKQIIRQFDSTNQLRKK 204


Top