BLASTX nr result

ID: Dioscorea21_contig00003250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003250
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002448229.1| hypothetical protein SORBIDRAFT_06g023630 [S...    58   7e-07
ref|NP_001159012.1| remorin [Zea mays] gi|194708138|gb|ACF88153....    58   7e-07
ref|XP_002877638.1| remorin family protein [Arabidopsis lyrata s...    57   1e-06
ref|NP_190463.1| Remorin-like protein [Arabidopsis thaliana] gi|...    57   2e-06
dbj|BAJ88188.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   3e-06

>ref|XP_002448229.1| hypothetical protein SORBIDRAFT_06g023630 [Sorghum bicolor]
           gi|241939412|gb|EES12557.1| hypothetical protein
           SORBIDRAFT_06g023630 [Sorghum bicolor]
          Length = 212

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/47 (63%), Positives = 31/47 (65%)
 Frame = -3

Query: 463 AMIHKAAEEKRAMTEAKRGXXXXXXXXXXXKYRATGLAPTKIFGCFG 323
           AMIHK AEEKRAM EAKRG           KYRATG AP K+ GCFG
Sbjct: 165 AMIHKEAEEKRAMVEAKRGEEVLKAEEMAAKYRATGHAPKKLIGCFG 211


>ref|NP_001159012.1| remorin [Zea mays] gi|194708138|gb|ACF88153.1| unknown [Zea mays]
           gi|195628632|gb|ACG36146.1| remorin [Zea mays]
           gi|414586120|tpg|DAA36691.1| TPA: Remorin isoform 1 [Zea
           mays] gi|414586121|tpg|DAA36692.1| TPA: Remorin isoform
           2 [Zea mays]
          Length = 199

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/47 (63%), Positives = 31/47 (65%)
 Frame = -3

Query: 463 AMIHKAAEEKRAMTEAKRGXXXXXXXXXXXKYRATGLAPTKIFGCFG 323
           AMIHK AEEKRAM EAKRG           KYRATG AP K+ GCFG
Sbjct: 152 AMIHKEAEEKRAMVEAKRGEEVLKAEEMAAKYRATGHAPKKLIGCFG 198


>ref|XP_002877638.1| remorin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323476|gb|EFH53897.1| remorin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 175

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/46 (65%), Positives = 31/46 (67%)
 Frame = -3

Query: 463 AMIHKAAEEKRAMTEAKRGXXXXXXXXXXXKYRATGLAPTKIFGCF 326
           A IHK AEEKRAMTEAKRG           KYRATG APTK+FG F
Sbjct: 130 AQIHKKAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPTKLFGLF 175


>ref|NP_190463.1| Remorin-like protein [Arabidopsis thaliana]
           gi|6522572|emb|CAB62016.1| remorin-like protein
           [Arabidopsis thaliana] gi|332644954|gb|AEE78475.1|
           Remorin-like protein [Arabidopsis thaliana]
          Length = 175

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/46 (65%), Positives = 31/46 (67%)
 Frame = -3

Query: 463 AMIHKAAEEKRAMTEAKRGXXXXXXXXXXXKYRATGLAPTKIFGCF 326
           A IHK AEEKRAMTEAKRG           KYRATG APTK+FG F
Sbjct: 130 AQIHKEAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPTKLFGFF 175


>dbj|BAJ88188.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 86

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/47 (59%), Positives = 31/47 (65%)
 Frame = -3

Query: 463 AMIHKAAEEKRAMTEAKRGXXXXXXXXXXXKYRATGLAPTKIFGCFG 323
           AMIHK AEEKRAM EAK+G           KYRATG +P K+ GCFG
Sbjct: 39  AMIHKEAEEKRAMVEAKKGEELLKAEEMAAKYRATGNSPKKVMGCFG 85


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