BLASTX nr result

ID: Dioscorea21_contig00003248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003248
         (1200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518806.1| virion binding protein, putative [Ricinus co...   416   e-114
ref|XP_002275179.1| PREDICTED: uncharacterized protein LOC100266...   415   e-113
ref|XP_002467583.1| hypothetical protein SORBIDRAFT_01g030490 [S...   413   e-113
ref|XP_002315824.1| predicted protein [Populus trichocarpa] gi|2...   412   e-112
ref|NP_001141396.1| hypothetical protein [Zea mays] gi|194704328...   410   e-112

>ref|XP_002518806.1| virion binding protein, putative [Ricinus communis]
            gi|223542187|gb|EEF43731.1| virion binding protein,
            putative [Ricinus communis]
          Length = 292

 Score =  416 bits (1070), Expect = e-114
 Identities = 203/273 (74%), Positives = 225/273 (82%), Gaps = 1/273 (0%)
 Frame = -1

Query: 1059 RSASNWWDDVNHSLLWQDRIFHALAALYGLVSVVALIQLVRIECRVPEYGWTTQKVFHFL 880
            R+ASNWW+D+NHS++WQDRIFH LAALYGLV+ VAL+QLVRI+ RVPEYGWTTQKVFHFL
Sbjct: 19   RNASNWWEDINHSVMWQDRIFHVLAALYGLVAAVALVQLVRIQLRVPEYGWTTQKVFHFL 78

Query: 879  NFLVNGVRSVVFVFRRNLQQFEP-IFQHVLLDFPGLAFFTTYALLVLFWAEIYYQARAVS 703
            NFLVNGVR +VF+FRRN++   P I QH+LLD P LAFFTTYALLVLFWAEIYYQARAVS
Sbjct: 79   NFLVNGVRCLVFIFRRNIETIHPPIIQHILLDMPSLAFFTTYALLVLFWAEIYYQARAVS 138

Query: 702  TDRLRPSFYTINGVVYAIQXXXXXXXXXXXXXXXXXLSKIFFAGVSXXXXXXXXXXXXXX 523
            TD LRPSF+TIN +VYA+Q                 +SK+FFAGVS              
Sbjct: 139  TDGLRPSFFTINAIVYAVQIAMWLVLWWKHYRVVVIISKMFFAGVSLFAALGFLLYGGRL 198

Query: 522  XXXLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDKAADLDILDHPILNF 343
               LQRFPVESKGRRKKLQEVGYVTTICFSCFL+RCIM CFNAFDKAADLD+LDHP+LNF
Sbjct: 199  FLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCIMNCFNAFDKAADLDVLDHPVLNF 258

Query: 342  LYYLLVEILPSSLVLFILRKLPPKRGITQYHPI 244
            +YYLLVEILPSSLVLFILRKLPPKRGITQYHPI
Sbjct: 259  IYYLLVEILPSSLVLFILRKLPPKRGITQYHPI 291


>ref|XP_002275179.1| PREDICTED: uncharacterized protein LOC100266794 isoform 1 [Vitis
            vinifera] gi|297738282|emb|CBI27483.3| unnamed protein
            product [Vitis vinifera]
          Length = 290

 Score =  415 bits (1067), Expect = e-113
 Identities = 208/271 (76%), Positives = 225/271 (83%), Gaps = 1/271 (0%)
 Frame = -1

Query: 1053 ASNWWDDVNHSLLWQDRIFHALAALYGLVSVVALIQLVRIECRVPEYGWTTQKVFHFLNF 874
            ASNWW++VN S++WQDRIFH LAALYG+V+ VAL+QLVRI+ RVPEYGWTTQKVFHFLNF
Sbjct: 19   ASNWWEEVNRSIVWQDRIFHVLAALYGIVAAVALVQLVRIQLRVPEYGWTTQKVFHFLNF 78

Query: 873  LVNGVRSVVFVFRRNLQQFEP-IFQHVLLDFPGLAFFTTYALLVLFWAEIYYQARAVSTD 697
            LVNGVRS+VFVFRRN+Q+  P I QH+LLD P LAFFTTYALLVLFWAEIYYQARAVSTD
Sbjct: 79   LVNGVRSLVFVFRRNVQRLHPEIIQHILLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 138

Query: 696  RLRPSFYTINGVVYAIQXXXXXXXXXXXXXXXXXLSKIFFAGVSXXXXXXXXXXXXXXXX 517
             LRPSFYTIN VVYAIQ                 LSK+FFAGVS                
Sbjct: 139  GLRPSFYTINAVVYAIQIAMWFVLWWKPIPIVFILSKMFFAGVSLFAALGFLLYGGRLFL 198

Query: 516  XLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDKAADLDILDHPILNFLY 337
             LQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFD+AA+LD+LDHPILNF+Y
Sbjct: 199  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAANLDVLDHPILNFIY 258

Query: 336  YLLVEILPSSLVLFILRKLPPKRGITQYHPI 244
            YLLVEILPSSLVLFILRKLPPKRGITQYHPI
Sbjct: 259  YLLVEILPSSLVLFILRKLPPKRGITQYHPI 289


>ref|XP_002467583.1| hypothetical protein SORBIDRAFT_01g030490 [Sorghum bicolor]
            gi|241921437|gb|EER94581.1| hypothetical protein
            SORBIDRAFT_01g030490 [Sorghum bicolor]
          Length = 293

 Score =  413 bits (1062), Expect = e-113
 Identities = 210/272 (77%), Positives = 222/272 (81%), Gaps = 1/272 (0%)
 Frame = -1

Query: 1053 ASNWWDDVNHSLLWQDRIFHALAALYGLVSVVALIQLVRIECRVPEYGWTTQKVFHFLNF 874
            A +WW DVN S LWQDRIFHALA LYG VSVVALIQL+RIECRVPEYGWTTQKVFHFLNF
Sbjct: 22   AVDWWRDVNESPLWQDRIFHALAVLYGFVSVVALIQLIRIECRVPEYGWTTQKVFHFLNF 81

Query: 873  LVNGVRSVVFVFRRNLQQFEP-IFQHVLLDFPGLAFFTTYALLVLFWAEIYYQARAVSTD 697
            LVNGVRSVVFV RRN+Q  EP I QHVLLD PGLAFFTTYALLVLFWAEIYYQARA+STD
Sbjct: 82   LVNGVRSVVFVLRRNVQLVEPEIIQHVLLDMPGLAFFTTYALLVLFWAEIYYQARAMSTD 141

Query: 696  RLRPSFYTINGVVYAIQXXXXXXXXXXXXXXXXXLSKIFFAGVSXXXXXXXXXXXXXXXX 517
             LRP+FY IN VVYAIQ                 LSK+FFAGVS                
Sbjct: 142  GLRPTFYWINTVVYAIQIILWLVLWWKPVRVMVILSKMFFAGVSLFAALGFVLYGGRLFL 201

Query: 516  XLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDKAADLDILDHPILNFLY 337
             LQRFPVESKGRRKKLQEVGYVTTICFSCFL+RC+MMC NAFDKAADLD+L+HPILNFLY
Sbjct: 202  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCLNAFDKAADLDVLNHPILNFLY 261

Query: 336  YLLVEILPSSLVLFILRKLPPKRGITQYHPIH 241
            YLLVEI+PS+LVLFILRKLPPKRGITQYHPIH
Sbjct: 262  YLLVEIVPSALVLFILRKLPPKRGITQYHPIH 293


>ref|XP_002315824.1| predicted protein [Populus trichocarpa] gi|222864864|gb|EEF01995.1|
            predicted protein [Populus trichocarpa]
          Length = 293

 Score =  412 bits (1058), Expect = e-112
 Identities = 205/273 (75%), Positives = 221/273 (80%), Gaps = 1/273 (0%)
 Frame = -1

Query: 1059 RSASNWWDDVNHSLLWQDRIFHALAALYGLVSVVALIQLVRIECRVPEYGWTTQKVFHFL 880
            + AS+WW D+N S  WQDRIFH LAALYGLV+ VA IQL+RI+ RVPEYGWTTQKVFHFL
Sbjct: 20   KEASSWWHDINESPFWQDRIFHVLAALYGLVAAVAFIQLIRIQLRVPEYGWTTQKVFHFL 79

Query: 879  NFLVNGVRSVVFVFRRNLQQFEP-IFQHVLLDFPGLAFFTTYALLVLFWAEIYYQARAVS 703
            NFLVNGVR ++FVFRRN++   P IFQH+LLDFP LAFFTTYALLVLFWAEIYYQARAVS
Sbjct: 80   NFLVNGVRCLLFVFRRNVESIHPPIFQHILLDFPSLAFFTTYALLVLFWAEIYYQARAVS 139

Query: 702  TDRLRPSFYTINGVVYAIQXXXXXXXXXXXXXXXXXLSKIFFAGVSXXXXXXXXXXXXXX 523
            TD LRPSF+TIN VVY IQ                 LSK+FFAGVS              
Sbjct: 140  TDGLRPSFFTINAVVYTIQIAMWLVLAWKTIPTVAILSKVFFAGVSLFAALGFLLYGGRL 199

Query: 522  XXXLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDKAADLDILDHPILNF 343
               LQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDKAADLD+LDHP+LNF
Sbjct: 200  FLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDKAADLDVLDHPVLNF 259

Query: 342  LYYLLVEILPSSLVLFILRKLPPKRGITQYHPI 244
            +YYLLVEILPSSLVLFILRKLPPKRGITQYHPI
Sbjct: 260  IYYLLVEILPSSLVLFILRKLPPKRGITQYHPI 292


>ref|NP_001141396.1| hypothetical protein [Zea mays] gi|194704328|gb|ACF86248.1| unknown
            [Zea mays] gi|413955548|gb|AFW88197.1| hypothetical
            protein ZEAMMB73_067326 [Zea mays]
            gi|413955549|gb|AFW88198.1| hypothetical protein
            ZEAMMB73_067326 [Zea mays]
          Length = 296

 Score =  410 bits (1053), Expect = e-112
 Identities = 206/272 (75%), Positives = 220/272 (80%), Gaps = 1/272 (0%)
 Frame = -1

Query: 1053 ASNWWDDVNHSLLWQDRIFHALAALYGLVSVVALIQLVRIECRVPEYGWTTQKVFHFLNF 874
            A +WW DVN S LWQDRIFHALA LYG+VS VAL+QL+RIECRVPEYGWTTQKVFHFLNF
Sbjct: 25   AVDWWRDVNESPLWQDRIFHALAVLYGIVSAVALVQLIRIECRVPEYGWTTQKVFHFLNF 84

Query: 873  LVNGVRSVVFVFRRNLQQFEP-IFQHVLLDFPGLAFFTTYALLVLFWAEIYYQARAVSTD 697
            LVNGVRS VFV RRN+Q  EP I QHVLLD PGLAFFTTYALLVLFWAEIYYQARA+STD
Sbjct: 85   LVNGVRSAVFVLRRNVQLVEPEIIQHVLLDMPGLAFFTTYALLVLFWAEIYYQARAMSTD 144

Query: 696  RLRPSFYTINGVVYAIQXXXXXXXXXXXXXXXXXLSKIFFAGVSXXXXXXXXXXXXXXXX 517
             LRP+FY IN VVYAIQ                 LSK+FFAGVS                
Sbjct: 145  GLRPTFYWINSVVYAIQIILWLVLWWKPVRIMVILSKMFFAGVSLFAALGFVLYGGRLFM 204

Query: 516  XLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDKAADLDILDHPILNFLY 337
             LQRFPVESKGRRKKLQEVGYVTTICFSCFL+RC+MMC NAFDKAADLD+L+HPILNF Y
Sbjct: 205  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCLNAFDKAADLDVLNHPILNFFY 264

Query: 336  YLLVEILPSSLVLFILRKLPPKRGITQYHPIH 241
            YLLVEI+PS+LVLFILRKLPPKRGITQYHPIH
Sbjct: 265  YLLVEIVPSALVLFILRKLPPKRGITQYHPIH 296


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