BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003241
         (1889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...   335   3e-89
ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...   332   2e-88
emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]   328   2e-87
ref|XP_003567192.1| PREDICTED: pentatricopeptide repeat-containi...   324   4e-86
ref|XP_002456460.1| hypothetical protein SORBIDRAFT_03g036710 [S...   323   1e-85

>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
            mitochondrial-like [Vitis vinifera]
          Length = 382

 Score =  335 bits (858), Expect = 3e-89
 Identities = 172/356 (48%), Positives = 235/356 (66%)
 Frame = +2

Query: 32   SIRAIIKAINDENDLDKLVTSFKSAAAIPRFRATHIVYEITVRRLAIAGRLASVEDILES 211
            ++ ++ K I  E +L +LV  FK ++ + RFR    +YE TVRRLA A R   +E+ILE 
Sbjct: 25   NLESVFKDIYRERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEE 84

Query: 212  QKAYSDITREGFGIRLISLYARAGMLSHAAATFDQLPSLGCPRTVASFNALLTACTLVKD 391
            QK Y DI+REGF +RLI+LY ++GM  HA   FD++P   C R+V SFNALL AC   K 
Sbjct: 85   QKKYKDISREGFAVRLITLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVNSKK 144

Query: 392  TDRLAEVFRDVPASDPSIVPNAISYNILILALCEKGDPHAALDALKLMEKNEMEPNLITF 571
             D++   F ++P S  S+ P+ +SYNI+I  LC+ G   +A+  L  MEK  +EP+LITF
Sbjct: 145  FDKVEGFFSELP-SKLSVEPDLVSYNIVINGLCDMGSMDSAVGMLDEMEKKSLEPDLITF 203

Query: 572  NTLLNGFYSKSFFLDGEKVWEKMKDKNIDPDIRSYNAKLRGLVLEGRTMEAVELIGKLND 751
            NTLLNG Y+   FLDGEK+W +M+ KNI PDIRSYNAKL GLV E R +E + L+ ++  
Sbjct: 204  NTLLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSYNAKLVGLVSEKRMLEGIGLVEEMQT 263

Query: 752  LGLKPDIFSFNAVIKGYLKDGKLEEAKKVYSELIKNDCAPNRWTFEMLIPELYEAGELDM 931
             G+KPD +SFNA+IKG+  DGK++EA   Y ++ +NDC P++ TF  L+P   E G  D 
Sbjct: 264  KGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMRENDCLPDKLTFATLVPLYCEKGSFDQ 323

Query: 932  ALKLSYESLSRRCFVEVGVLQKVVDGLAKASRVGEAKKLVERGKFKSFARKGLKLP 1099
            A +L  E  +R+C V+  +LQ  VDGL K  +V EAKKLV+ G   S+ R  LK+P
Sbjct: 324  AFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEAKKLVQLGNSNSYRRYNLKIP 379


>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
            mitochondrial [Vitis vinifera]
          Length = 383

 Score =  332 bits (852), Expect = 2e-88
 Identities = 173/357 (48%), Positives = 236/357 (66%), Gaps = 1/357 (0%)
 Frame = +2

Query: 32   SIRAIIKAINDENDLDKLVTSFKSAAAIPRFRATHIVYEITVRRLAIAGRLASVEDILES 211
            ++ ++ K I  E +L +LV  FK ++ + RFR    +YE TVRRLA A R   +E+ILE 
Sbjct: 25   NLESVFKDIYRERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEE 84

Query: 212  QKAYSDITREGFGIRLISLYARAGMLSHAAATFDQLPSLGCPRTVASFNALLTACTLVKD 391
            QK Y DI+REGF +RLISLY ++GM  HA   FD++P   C R+V SFNALL AC   K 
Sbjct: 85   QKKYKDISREGFAVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKK 144

Query: 392  TDRLAEVFRDVPASDPSIVPNAISYNILILALCEKGDPHAALDALKLMEKNEMEPNLITF 571
             D++   F ++P S  S+ P+ +SYNI+I  LC+ G   +A+  L  MEK  +EP+LITF
Sbjct: 145  FDKVEGFFSELP-SKLSVEPDLVSYNIVIKGLCDMGSMDSAVGMLDEMEKKSLEPDLITF 203

Query: 572  NTLLNGFYSKSFFLDGEKVWEKMKDKNIDPDIRSYNAKLRGLV-LEGRTMEAVELIGKLN 748
            NTLLNG Y+   FLDGEK+W +M+ KNI PDIRSYNAKL GLV  E R +E + L+ ++ 
Sbjct: 204  NTLLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSYNAKLVGLVSSEKRMLEGIGLVEEMQ 263

Query: 749  DLGLKPDIFSFNAVIKGYLKDGKLEEAKKVYSELIKNDCAPNRWTFEMLIPELYEAGELD 928
              G+KPD +SFNA+IKG+  DGK++EA   Y ++ +NDC+P++ TF  L+P   E G  D
Sbjct: 264  TKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMRENDCSPDKLTFATLVPLYCEKGSFD 323

Query: 929  MALKLSYESLSRRCFVEVGVLQKVVDGLAKASRVGEAKKLVERGKFKSFARKGLKLP 1099
             A +L  E  +R+C V+  +LQ  VDGL K  +V EAKKLV+ G   S+ R  LK+P
Sbjct: 324  QAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEAKKLVQLGNSNSYRRYNLKIP 380


>emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
          Length = 383

 Score =  328 bits (842), Expect = 2e-87
 Identities = 171/357 (47%), Positives = 234/357 (65%), Gaps = 1/357 (0%)
 Frame = +2

Query: 32   SIRAIIKAINDENDLDKLVTSFKSAAAIPRFRATHIVYEITVRRLAIAGRLASVEDILES 211
            ++ ++ K I  E +L +LV  FK ++ + RFR    +YE TVRRLA A R   +E+ILE 
Sbjct: 25   NLESVFKDIYRERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEE 84

Query: 212  QKAYSDITREGFGIRLISLYARAGMLSHAAATFDQLPSLGCPRTVASFNALLTACTLVKD 391
            QK Y DI+REGF +RLISLY ++GM  HA   FD++P   C R+V SFN LL AC   K 
Sbjct: 85   QKKYKDISREGFAVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNXLLGACVXSKK 144

Query: 392  TDRLAEVFRDVPASDPSIVPNAISYNILILALCEKGDPHAALDALKLMEKNEMEPNLITF 571
             D++   F ++P S  S+ P+ +SYNI+I  LC+ G   +A+  L  MEK  +EP+LITF
Sbjct: 145  FDKVEGFFSELP-SKLSVEPDLVSYNIVIKGLCDMGSMDSAVGMLDEMEKKSLEPDLITF 203

Query: 572  NTLLNGFYSKSFFLDGEKVWEKMKDKNIDPDIRSYNAKLRGLV-LEGRTMEAVELIGKLN 748
            NTLLN  Y+   FLDGEK+W +M+ KNI PDIRSYNAKL GLV  E R +E + L+ ++ 
Sbjct: 204  NTLLNRXYTSGRFLDGEKIWGRMEKKNILPDIRSYNAKLVGLVSSEKRMLEGIGLVEEMQ 263

Query: 749  DLGLKPDIFSFNAVIKGYLKDGKLEEAKKVYSELIKNDCAPNRWTFEMLIPELYEAGELD 928
              G+KPD +SFNA+IKG+  DGK++EA   Y ++ +NDC+P++ TF  L+P   E G  D
Sbjct: 264  TKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMRENDCSPDKLTFATLVPLYCEKGSFD 323

Query: 929  MALKLSYESLSRRCFVEVGVLQKVVDGLAKASRVGEAKKLVERGKFKSFARKGLKLP 1099
             A +L  E  +R+C V+  +LQ  VDGL K  +V EAKKLV+ G   S+ R  LK+P
Sbjct: 324  QAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEAKKLVQLGNSNSYRRYNLKIP 380


>ref|XP_003567192.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
            mitochondrial-like, partial [Brachypodium distachyon]
          Length = 457

 Score =  324 bits (831), Expect = 4e-86
 Identities = 186/395 (47%), Positives = 250/395 (63%), Gaps = 29/395 (7%)
 Frame = +2

Query: 2    PNPNPKPPSESIRA------------------------IIKAINDENDLDKLVTSFKSAA 109
            PNP PKP  +  RA                        IIK +  E D +KLV+ F +A+
Sbjct: 34   PNPKPKPEPKIKRALTPKPPAADAGSDADHKLWKPLGYIIKGLLRERDPEKLVSDFVAAS 93

Query: 110  -AIPRFRATHIVYEITVRRLAIAGRLASVEDILESQKAYSDITREGFGIRLISLYARAGM 286
             A  RFR  H VYE+ V RLA  GR  S+E +L +QK + + ++EGF  RLI LY RA M
Sbjct: 94   SASARFRDRHRVYEVAVSRLASFGRQDSIETLLGAQKRFLETSKEGFATRLIGLYGRAAM 153

Query: 287  LSHAAATFDQLPS-LGCPRTVASFNALLTACTLVKDTDRLAEVFRDVPASDPSIVPNAIS 463
             + AAATF +LP+ L C  T   FNA+LTA +  K+ D LA  F+++PAS P +VP+  S
Sbjct: 154  PAQAAATFHELPAQLKCTMT---FNAVLTAYSRAKEFDALATAFQEIPASHPLVVPSVYS 210

Query: 464  YNILILALCEKGDPHAALDALKLMEKNEMEPNLITFNTLLNGFYSKSFFLDGEKVWEKMK 643
            YNILI ALC+K    AAL+ + LMEK  + P+ I+FNTLLNGF       D E VWE MK
Sbjct: 211  YNILISALCQKPALSAALNVVTLMEKCGVLPDNISFNTLLNGFSKNGRVDDAEAVWEMMK 270

Query: 644  DKNIDPDIRSYNAKLRGLVLEGRTMEAVELIGKLNDLGLKPDIFSFNAVIKGYLKDGKLE 823
            ++N++PD +SYNAKLRGLV EGR  +AV ++ ++   G KPD  S+N +I+GY   G+LE
Sbjct: 271  ERNLEPDTKSYNAKLRGLVAEGRIEDAVAVVERMEKEGPKPDTVSYNELIRGYCSAGRLE 330

Query: 824  EAKKVYSELIKNDCAPNRWTFEMLIPELYEAGELDMALKLSYESLS---RRCFVEVGVLQ 994
            +AKK+Y  L+KN+CAPN+ T+E L+P L +AGELD AL+  +E  S   + C V+  +LQ
Sbjct: 331  DAKKLYDGLVKNECAPNKGTYETLLPRLLQAGELDCALRYCHELFSSNIKSCRVDCSLLQ 390

Query: 995  KVVDGLAKASRVGEAKKLVERGKFKSFARKGLKLP 1099
             VV  L +ASRV EA K+VE G+ K + RK L++P
Sbjct: 391  DVVTTLVEASRVDEAAKIVELGRKKYYPRKLLRMP 425


>ref|XP_002456460.1| hypothetical protein SORBIDRAFT_03g036710 [Sorghum bicolor]
            gi|241928435|gb|EES01580.1| hypothetical protein
            SORBIDRAFT_03g036710 [Sorghum bicolor]
          Length = 439

 Score =  323 bits (828), Expect = 1e-85
 Identities = 183/395 (46%), Positives = 242/395 (61%)
 Frame = +2

Query: 8    PNPKPPSESIRAIIKAINDENDLDKLVTSFKSAAAIPRFRATHIVYEITVRRLAIAGRLA 187
            P+ +  S S+   +KAI  E D DK        A +P     H VYE+ V RLA  GR  
Sbjct: 44   PDERRESRSLNKTLKAIFRERDPDK--------AGVP-----HRVYEVAVARLASFGRHD 90

Query: 188  SVEDILESQKAYSDITREGFGIRLISLYARAGMLSHAAATFDQLPSLGCPRTVASFNALL 367
            ++  I++SQK + + +  GF  RL+ L   A M SHAAA F  LP     ++V +FNALL
Sbjct: 91   AIAAIIDSQKPFIEASSVGFAARLVRLCGGASMPSHAAAIFHGLPPKH--KSVMTFNALL 148

Query: 368  TACTLVKDTDRLAEVFRDVPASDPSIVPNAISYNILILALCEKGDPHAALDALKLMEKNE 547
             A     D D L   F+ +PAS P+I+P   SYNILI ALC+K +  AALD + LMEK  
Sbjct: 149  AAYVDASDFDALTTTFQQIPASHPTIIPTVYSYNILISALCQKPELSAALDVIALMEKRG 208

Query: 548  MEPNLITFNTLLNGFYSKSFFLDGEKVWEKMKDKNIDPDIRSYNAKLRGLVLEGRTMEAV 727
            + P++I+FN LLNGFY+   F D EKVWE MK++NI+PD +SYNAKLRGLV +GR  +AV
Sbjct: 209  VSPDIISFNILLNGFYNNDSFDDAEKVWEMMKERNIEPDEKSYNAKLRGLVSQGRVEDAV 268

Query: 728  ELIGKLNDLGLKPDIFSFNAVIKGYLKDGKLEEAKKVYSELIKNDCAPNRWTFEMLIPEL 907
             LI ++   G KPD  S+N +I+GY K+G+L EAKKVY +LIKN+CAPNR TF  L+P L
Sbjct: 269  ALIERMQKEGPKPDSVSYNELIRGYCKEGRLNEAKKVYDDLIKNECAPNRGTFHTLVPHL 328

Query: 908  YEAGELDMALKLSYESLSRRCFVEVGVLQKVVDGLAKASRVGEAKKLVERGKFKSFARKG 1087
             EAGELD AL   +E  SR+C V   +LQ VV  L  ASR+GEAK++V  G+   + +K 
Sbjct: 329  VEAGELDRALSCCHEIFSRKCRVHCSLLQGVVTALIAASRMGEAKRIVHLGRKNYYPQKH 388

Query: 1088 LKLPLSSLVG*RFDCPNPLKVAGVHFSQSRSEYSD 1192
            L++P           P+  K  G+   Q   E +D
Sbjct: 389  LRMP-----------PHTRKDEGLKMPQPAGEDND 412