BLASTX nr result

ID: Dioscorea21_contig00003229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003229
         (1818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280712.1| PREDICTED: uncharacterized protein LOC100262...   403   e-111
ref|XP_002514263.1| elongation factor ts, putative [Ricinus comm...   365   2e-98
ref|XP_002325009.1| predicted protein [Populus trichocarpa] gi|2...   353   1e-94
ref|XP_003516475.1| PREDICTED: uncharacterized protein LOC100797...   344   4e-92
ref|XP_003534213.1| PREDICTED: uncharacterized protein LOC100804...   337   5e-90

>ref|XP_002280712.1| PREDICTED: uncharacterized protein LOC100262932 [Vitis vinifera]
          Length = 1135

 Score =  403 bits (1036), Expect(2) = e-111
 Identities = 228/400 (57%), Positives = 285/400 (71%), Gaps = 9/400 (2%)
 Frame = +2

Query: 197  MTPIIHCSAGNISVLPRTTVVPGKEIQLSRCCLTGKHTRVASLSHRCLLPQS-SLQLFRI 373
            MTP+I  S  NIS++  T     K   L+RC L GK T+      R LLP S S++LF  
Sbjct: 1    MTPVIPSSISNISLISGTAFTSNKNNCLTRCYLLGKSTKQTLSPQRFLLPLSTSVRLFPQ 60

Query: 374  YGKSYHLKQGSRNHILAAVGTNVTVEDSNXXXXXXXXXXXXXXXXXX-GPNDPAQGSAVA 550
            Y     L + SR HIL+A GT+V VE S+                      +P+  S   
Sbjct: 61   YRSGCTLHRKSRTHILSATGTDVAVEQSDSPATEDSSGAPEVPSDSAEASEEPSIKSDGG 120

Query: 551  TSNVRDKRTRPVRKSEMPPVKNEELVPGASFVGKVRSIQPFGAFIDFGAFTDGLVHVSRM 730
             ++ + KR RP RKSEMPPVKNEELVPGA+F GKV+SIQPFGAFIDFGAFTDGLVHVSR+
Sbjct: 121  VTSSQPKRARP-RKSEMPPVKNEELVPGATFTGKVKSIQPFGAFIDFGAFTDGLVHVSRL 179

Query: 731  SEGYVKDVGSIVSVGQEVKIRIVEVNMENGRIALTMRDGSDTNKSQQRKEASTSGSDDKP 910
            S+ YVKDVG+IVS+GQEVK+R+VE N E GRI+LTMRD  D  K QQ+K+A++  S DKP
Sbjct: 180  SDSYVKDVGNIVSIGQEVKVRLVEANTETGRISLTMRDSDDPTKPQQQKDAAS--SSDKP 237

Query: 911  KPNKRNASRTDQRRADIQKTSKFVKGQVLDGTVKNQTRSGAFISLPEGEEGFLPISEES- 1087
            +P++RN  R++QRR +++KTSKFVKGQ L+GTVKN  R+GAFISLPEGEEGFLP SEE+ 
Sbjct: 238  RPSRRNTQRSNQRRDEVKKTSKFVKGQDLEGTVKNLNRAGAFISLPEGEEGFLPTSEEAD 297

Query: 1088 EGFDSILGNTSLQVGQEVSVRVLRISRGKVTLTMKKEQDVELLNEQLNLGMEDVVATNPF 1267
            EGF +++G +SLQVGQEVSVRVLRISRG+VTLTMKKE+D E L+ +L  G+    ATNPF
Sbjct: 298  EGFGNLMGGSSLQVGQEVSVRVLRISRGQVTLTMKKEEDAEKLDLKLGEGVVH-TATNPF 356

Query: 1268 QVAFRKNKEIAAFLNEREKSQKASEI------SKQIGGSI 1369
             +AFRKNKEIA FL+EREK+ + +EI      S++I G +
Sbjct: 357  VLAFRKNKEIATFLDEREKTVEPAEIPAIPKTSEEIEGKV 396



 Score = 28.9 bits (63), Expect(2) = e-111
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +1

Query: 1489 DKVQVEGSVKKSDIDEPNVPTGSHIGLETDETISKELPAEASVVD 1623
            D ++V+     SD    +VP+     +E DET S+EL   AS VD
Sbjct: 404  DILEVQDQPASSDEKSVSVPSAVDEKVEGDETPSEELDVGASAVD 448


>ref|XP_002514263.1| elongation factor ts, putative [Ricinus communis]
            gi|223546719|gb|EEF48217.1| elongation factor ts,
            putative [Ricinus communis]
          Length = 972

 Score =  365 bits (937), Expect = 2e-98
 Identities = 205/387 (52%), Positives = 268/387 (69%), Gaps = 6/387 (1%)
 Frame = +2

Query: 197  MTPIIHCSAGNISVLPRTTVVPGKEIQLSRCCLTGKHTRVASLSHRCLLPQ-SSLQLFRI 373
            MT ++ CS  +IS++P T     K   L+RC L  K ++    S R +LP  +S+ LF  
Sbjct: 1    MTTVVPCSTSSISLIPGTPFRLKKNNNLTRCNLLRKSSKHVISSQRHVLPLLTSVGLFPH 60

Query: 374  YGKSYHLKQGSRNHILAAVGTNVTVEDSNXXXXXXXXXXXXXXXXXXGPNDPAQGSAVAT 553
            Y +  +    S  + ++A GT+  V                         + ++ S++ +
Sbjct: 61   YRRDCNWLHRSIVYGVSATGTDTDVVIEEPESPVTDENSGGASDIPADAAETSENSSIKS 120

Query: 554  SNVR----DKRTRPVRKSEMPPVKNEELVPGASFVGKVRSIQPFGAFIDFGAFTDGLVHV 721
             + R     KR+RP RKSEMPPV NEEL+PGA+F GKVRSIQPFGAF+DFGAFTDGLVHV
Sbjct: 121  DSNRAPAQTKRSRPGRKSEMPPVTNEELIPGATFTGKVRSIQPFGAFVDFGAFTDGLVHV 180

Query: 722  SRMSEGYVKDVGSIVSVGQEVKIRIVEVNMENGRIALTMRDGSDTNKSQQRKEASTSGSD 901
            SR+S+ +VKDVG++VSVGQEV +R+VE N E GRI+LTMR+  DTNKSQQ+++A  + S 
Sbjct: 181  SRLSDNFVKDVGNVVSVGQEVTVRLVEANTETGRISLTMRESDDTNKSQQQRDAPATASS 240

Query: 902  DKPKPNKRNASRTDQRRADIQKTSKFVKGQVLDGTVKNQTRSGAFISLPEGEEGFLPISE 1081
             KP+P +RNA ++ QRR D  K SKFVKGQ L+GTVKN TRSG FISLPEGEEGFLP SE
Sbjct: 241  GKPRPGRRNAPKSGQRRED-NKISKFVKGQELEGTVKNLTRSGTFISLPEGEEGFLPTSE 299

Query: 1082 ESE-GFDSILGNTSLQVGQEVSVRVLRISRGKVTLTMKKEQDVELLNEQLNLGMEDVVAT 1258
            ES+ G +S++G +SL+VGQEVSVRVLRISRG+VTLTMKKE+D   LN +L  G+    AT
Sbjct: 300  ESDGGLESMMGGSSLEVGQEVSVRVLRISRGQVTLTMKKEED-NKLNTELLQGVVH-AAT 357

Query: 1259 NPFQVAFRKNKEIAAFLNEREKSQKAS 1339
            NPF +AFRKN++I++FL EREK +K +
Sbjct: 358  NPFVLAFRKNRDISSFLEEREKMEKVA 384


>ref|XP_002325009.1| predicted protein [Populus trichocarpa] gi|222866443|gb|EEF03574.1|
            predicted protein [Populus trichocarpa]
          Length = 976

 Score =  353 bits (905), Expect = 1e-94
 Identities = 200/385 (51%), Positives = 267/385 (69%), Gaps = 3/385 (0%)
 Frame = +2

Query: 197  MTPIIHCSAGNISVLPRTTVVPGKEIQLSRCCLTGKHTRVASLSHRCLLPQSS-LQLFRI 373
            MTP++ CS  NI ++P T     K   L    L+ K T+ AS S R +LP    ++LF  
Sbjct: 1    MTPVLPCSTSNICLIPGTAFSINKNNSLKNGSLSRKSTKYASSSQRLVLPLPGFVKLFPQ 60

Query: 374  YGKSYHLKQGSRNHILAAVGTNVTVEDSNXXXXXXXXXXXXXXXXXXGPN-DPAQGSAVA 550
            Y +   +   S  H ++A GT+V VE+ +                      D +  +  +
Sbjct: 61   YHRDCAMVHRSVAHAVSATGTDVAVEEPDSPVVDKDSDGVSEIPADAVETIDSSTKAGSS 120

Query: 551  TSNVRDKRTRPVRKSEMPPVKNEELVPGASFVGKVRSIQPFGAFIDFGAFTDGLVHVSRM 730
             +  +  R++  RKSEMPPVKNE+LVPGA+F GKVRSIQPFGAF+DFGAFTDGLVHVS++
Sbjct: 121  PAPAQSSRSKGSRKSEMPPVKNEDLVPGATFTGKVRSIQPFGAFVDFGAFTDGLVHVSKL 180

Query: 731  SEGYVKDVGSIVSVGQEVKIRIVEVNMENGRIALTMRDGSDTNKSQQRKEASTSGSDDKP 910
            S+ +VKDVGS+VSVGQEVK+R+VE N E GRI+LTMR+  DT+K QQR ++  +GS ++ 
Sbjct: 181  SDSFVKDVGSVVSVGQEVKVRLVEANTETGRISLTMRENDDTSKFQQRNDSPATGSSNR- 239

Query: 911  KPNKRNASRTDQRRADIQKTSKFVKGQVLDGTVKNQTRSGAFISLPEGEEGFLPISEESE 1090
            +  +RN S+ +QR+ ++ K+SKFVKGQ L+GTVKN TRSGAFISLPEGEEGFLP SEES+
Sbjct: 240  QAARRNTSKPNQRKDEV-KSSKFVKGQNLEGTVKNLTRSGAFISLPEGEEGFLPRSEESD 298

Query: 1091 G-FDSILGNTSLQVGQEVSVRVLRISRGKVTLTMKKEQDVELLNEQLNLGMEDVVATNPF 1267
              F  ++G++SLQ+GQEVSVRVLRI+RG+VTLTMKKE D +  + +L  G+    ATNPF
Sbjct: 299  DVFAGMMGDSSLQIGQEVSVRVLRITRGQVTLTMKKE-DADKRDTELIQGIVH-TATNPF 356

Query: 1268 QVAFRKNKEIAAFLNEREKSQKASE 1342
             +AFRKNK+IAAFL+ERE + +  E
Sbjct: 357  MLAFRKNKDIAAFLDEREIATEQPE 381


>ref|XP_003516475.1| PREDICTED: uncharacterized protein LOC100797166 [Glycine max]
          Length = 1133

 Score =  344 bits (883), Expect = 4e-92
 Identities = 199/429 (46%), Positives = 277/429 (64%), Gaps = 10/429 (2%)
 Frame = +2

Query: 197  MTPIIHCSAGNISVLPRTTVVPGKEIQLSRCCLTGKHTRVASLSHRCLLPQ--SSLQLFR 370
            M P+I CS GN+S++P       K   L+R  L+    +  S S R LLP   +S    +
Sbjct: 1    MNPVIPCSIGNVSIIPVFIYSTRKNNTLTRFNLSRSTVKPGSSSWRFLLPSFVASGAFPQ 60

Query: 371  IYG-KSYHLKQGSRNHILAAVGTNVTVEDSNXXXXXXXXXXXXXXXXXXGPNDPAQGSAV 547
              G +S+H K  +    ++A  T+VTVE+ +                     D +  S  
Sbjct: 61   NKGIRSFHKKSSTS---ISATETDVTVEEPSPVADEDSGEITSNEVGIS--EDSSSKSDA 115

Query: 548  ATSNVRDKRTRPVRKSEMPPVKNEELVPGASFVGKVRSIQPFGAFIDFGAFTDGLVHVSR 727
                 + +R+RP RKSEMPPVKNE+L+PGA+F GKV+S+QPFGAF+D GAFTDGLVH+S 
Sbjct: 116  NPDPAKGRRSRPARKSEMPPVKNEDLIPGATFTGKVKSVQPFGAFVDIGAFTDGLVHISM 175

Query: 728  MSEGYVKDVGSIVSVGQEVKIRIVEVNMENGRIALTMRDGSDTNKSQQRKEASTSGSDDK 907
            +S+ YVKDV S+VSVGQEVK++++EVN E  RI+L+MR+ +DT K  QRK+A      +K
Sbjct: 176  LSDSYVKDVTSVVSVGQEVKVKLIEVNTETQRISLSMRENADTGK--QRKDAPV--KTEK 231

Query: 908  PKPNKRNASRTDQRRADIQKTSKFVKGQVLDGTVKNQTRSGAFISLPEGEEGFLPISEE- 1084
              P KRN+S+   ++ ++ K++KF  GQ L G+VKN  RSGAFISLPEGEEGFLP+SEE 
Sbjct: 232  AGPGKRNSSKPSSKKDNVTKSTKFAIGQQLVGSVKNLARSGAFISLPEGEEGFLPVSEEP 291

Query: 1085 SEGFDSILGNTSLQVGQEVSVRVLRISRGKVTLTMKKEQDVELLNEQLNLGMEDVVATNP 1264
             +GFD+++GNT+L+VGQEV+VRVLRI+RG+VTLTMKKE+D   L+   N G+   VATNP
Sbjct: 292  DDGFDNVMGNTTLEVGQEVNVRVLRITRGQVTLTMKKEEDTAGLDSTFNHGVVH-VATNP 350

Query: 1265 FQVAFRKNKEIAAFLNEREKSQK------ASEISKQIGGSIXXXXXXXXXXXXXGSVKKS 1426
            F +AFRKNK+IA+FL+EREK+Q        +  S++I G++             G  + S
Sbjct: 351  FVLAFRKNKDIASFLDEREKTQNEVQKPTTASTSEEIKGTVNQGETVLDVPDVQGEPESS 410

Query: 1427 DIDEPNVPT 1453
             + + +VP+
Sbjct: 411  KLTDDDVPS 419


>ref|XP_003534213.1| PREDICTED: uncharacterized protein LOC100804285 [Glycine max]
          Length = 1135

 Score =  337 bits (865), Expect = 5e-90
 Identities = 197/384 (51%), Positives = 257/384 (66%), Gaps = 6/384 (1%)
 Frame = +2

Query: 197  MTPIIHCSAGNISVLPRTTVVPGKEIQLSRCCLTGKHTRVASLSHRCLLPQ-----SSLQ 361
            M P+I CS GN+S++P  T    K   L+R  L+    +  S S R LLP      +  Q
Sbjct: 1    MNPVIPCSIGNVSIIPGFTYSTRKNNTLTRLNLSRSTVKPGSSSWRFLLPSFVASGAFPQ 60

Query: 362  LFRIYGKSYHLKQGSRNHILAAVGTNVTVEDSNXXXXXXXXXXXXXXXXXXGPNDPAQGS 541
              RI   S+H K  SR  I +A  T+V VE+                       D    S
Sbjct: 61   NKRIL--SFHKK--SRTSI-SATETDVAVEEPGPVADEDSGELPSNEVGVS--EDSFTKS 113

Query: 542  AVATSNVRDKRTRPVRKSEMPPVKNEELVPGASFVGKVRSIQPFGAFIDFGAFTDGLVHV 721
                   + +R+RP RKSEMPPVKNE+L+PGA+F GKV+S+QPFGAF+D GAFTDGLVH+
Sbjct: 114  DANPDPAKARRSRPARKSEMPPVKNEDLLPGATFTGKVKSVQPFGAFVDIGAFTDGLVHI 173

Query: 722  SRMSEGYVKDVGSIVSVGQEVKIRIVEVNMENGRIALTMRDGSDTNKSQQRKEASTSGSD 901
            S +S+ YVKDV S+VSVGQEVK++++EVN E  RI+L+MR+  DT K  QRK+A T    
Sbjct: 174  SMLSDSYVKDVASVVSVGQEVKVKLIEVNTETQRISLSMRENVDTGK--QRKDAPT--KT 229

Query: 902  DKPKPNKRNASRTDQRRADIQKTSKFVKGQVLDGTVKNQTRSGAFISLPEGEEGFLPISE 1081
            +K  P KRN S+   ++ ++ K++KF  GQ L G+VKN  RSGAFISLPEGEEGFLP+SE
Sbjct: 230  EKAGPGKRNNSKPSPKKDNVTKSTKFAIGQQLVGSVKNLARSGAFISLPEGEEGFLPVSE 289

Query: 1082 E-SEGFDSILGNTSLQVGQEVSVRVLRISRGKVTLTMKKEQDVELLNEQLNLGMEDVVAT 1258
            E  +GFD+++GNT+L+VGQEV+VRVLRI+RG+VTLTMKKE+D   L+   N G+   VAT
Sbjct: 290  EPDDGFDNVMGNTTLEVGQEVNVRVLRITRGQVTLTMKKEEDTAGLDSTFNQGVVH-VAT 348

Query: 1259 NPFQVAFRKNKEIAAFLNEREKSQ 1330
            NPF VAFRKNK+IA+FL++REK+Q
Sbjct: 349  NPFVVAFRKNKDIASFLDDREKTQ 372


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