BLASTX nr result

ID: Dioscorea21_contig00003217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003217
         (1562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280143.1| PREDICTED: serine incorporator 3 isoform 1 [...   509   e-141
ref|XP_003631983.1| PREDICTED: serine incorporator 3 isoform 2 [...   504   e-140
ref|XP_002516786.1| Membrane protein PB1A10.07c, putative [Ricin...   498   e-138
ref|XP_003577418.1| PREDICTED: probable serine incorporator-like...   491   e-136
gb|ABR16232.1| unknown [Picea sitchensis]                             491   e-136

>ref|XP_002280143.1| PREDICTED: serine incorporator 3 isoform 1 [Vitis vinifera]
            gi|297736976|emb|CBI26177.3| unnamed protein product
            [Vitis vinifera]
          Length = 411

 Score =  509 bits (1310), Expect = e-141
 Identities = 256/401 (63%), Positives = 290/401 (72%)
 Frame = +3

Query: 84   VASGISRRSARLAYCGLFALSLIVSWILREFAAPLLEKLPWINTSSETLPTEWYQTSAVL 263
            VASGIS+RSARLAYCGLF  SLIVSWILRE AAPLL+K+PWI+TS +T  TEWYQ  AVL
Sbjct: 19   VASGISKRSARLAYCGLFGGSLIVSWILREVAAPLLKKIPWISTS-QTHSTEWYQQEAVL 77

Query: 264  RVSLGNFLFFTIFALIMIGVKDQNDRRDSWHHGGWIVKLVVWAVLIALMFFLPNVVVTIY 443
            RVSLGNFLFF IFALIMIGVKDQNDRRDSWHHGGW+ K+V+W +LI LMFF+PNVV++IY
Sbjct: 78   RVSLGNFLFFAIFALIMIGVKDQNDRRDSWHHGGWVAKMVIWVLLIILMFFVPNVVISIY 137

Query: 444  ATLSKFGSGXXXXXXXXXXXDFTHTWNDAWVEKDEQKWYIALLAVSVICYIATYSFSGVL 623
             TLSKFG+G           DFTH+WNDAWVEKDEQKWYIALLAVS+ CY+  ++FSG+L
Sbjct: 138  GTLSKFGAGLFLLVQVIILLDFTHSWNDAWVEKDEQKWYIALLAVSIGCYLLAFTFSGIL 197

Query: 624  FLWFNPSGQDCGLNIFFIVMTMILGFAFAIIALHPKVNGSLLPASVISVYCAYLCYSGLS 803
            F+WFNPSG DCGLNIFFIVMTMIL F+FA+IALHP+VNGSLLPASVIS+YCAY+CY+GLS
Sbjct: 198  FIWFNPSGNDCGLNIFFIVMTMILAFSFAVIALHPRVNGSLLPASVISLYCAYVCYTGLS 257

Query: 804  SEPRDYACNGLHNHSKSVSIGXXXXXXXXXXXXXXYSAVRAGXXXXXXXXXXXXXXXXXX 983
            SEPRDYACNGLHN SK+VS                YSAVRAG                  
Sbjct: 258  SEPRDYACNGLHNKSKAVSTSTLILGMLTTVLSVLYSAVRAGSSTTFLSPPSSPKSGGKK 317

Query: 984  XLIESGDMESGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMYSAMLLXXXXXXXXX 1163
             L+ES D ESGK                               SMYSAMLL         
Sbjct: 318  PLLESEDTESGK-------EKKEEEAKPVSYSYTFFHLIFALASMYSAMLL-SGWTSSND 369

Query: 1164 XXELIDVGWTSVWVRICTEWVTAALYVWTLVAPLVLPDREF 1286
              ++IDVGWTSVWVRICTEWVTA LYVW+L+AP++ PDREF
Sbjct: 370  SSDMIDVGWTSVWVRICTEWVTALLYVWSLLAPILFPDREF 410


>ref|XP_003631983.1| PREDICTED: serine incorporator 3 isoform 2 [Vitis vinifera]
          Length = 409

 Score =  504 bits (1299), Expect = e-140
 Identities = 256/401 (63%), Positives = 290/401 (72%)
 Frame = +3

Query: 84   VASGISRRSARLAYCGLFALSLIVSWILREFAAPLLEKLPWINTSSETLPTEWYQTSAVL 263
            VASGIS+RSARLAYCGLF  SLIVSWILRE AAPLL+K+PWI+TS +T  TEWYQ  AVL
Sbjct: 19   VASGISKRSARLAYCGLFGGSLIVSWILREVAAPLLKKIPWISTS-QTHSTEWYQQEAVL 77

Query: 264  RVSLGNFLFFTIFALIMIGVKDQNDRRDSWHHGGWIVKLVVWAVLIALMFFLPNVVVTIY 443
            RVSLGNFLFF IFALIMIGVKDQNDRRDSWHHGGW+ K+V+W +LI LMFF+PNVV++IY
Sbjct: 78   RVSLGNFLFFAIFALIMIGVKDQNDRRDSWHHGGWVAKMVIWVLLIILMFFVPNVVISIY 137

Query: 444  ATLSKFGSGXXXXXXXXXXXDFTHTWNDAWVEKDEQKWYIALLAVSVICYIATYSFSGVL 623
             TLSKFG+G           DFTH+WNDAWVEKDEQKWYIALLAVS+ CY+  ++FSG+L
Sbjct: 138  GTLSKFGAGLFLLVQVIILLDFTHSWNDAWVEKDEQKWYIALLAVSIGCYLLAFTFSGIL 197

Query: 624  FLWFNPSGQDCGLNIFFIVMTMILGFAFAIIALHPKVNGSLLPASVISVYCAYLCYSGLS 803
            F+WFNPSG DCGLNIFFIVMTMIL F+FA+IALHP+VNGSLLPASVIS+YCAY+CY+GLS
Sbjct: 198  FIWFNPSGNDCGLNIFFIVMTMILAFSFAVIALHPRVNGSLLPASVISLYCAYVCYTGLS 257

Query: 804  SEPRDYACNGLHNHSKSVSIGXXXXXXXXXXXXXXYSAVRAGXXXXXXXXXXXXXXXXXX 983
            SEPRDYACNGLHN SK+VS                YSAVRAG                  
Sbjct: 258  SEPRDYACNGLHNKSKAVSTSTLILGMLTTVLSVLYSAVRAG--SSTTFLSPPSSPKSEK 315

Query: 984  XLIESGDMESGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMYSAMLLXXXXXXXXX 1163
             L+ES D ESGK                               SMYSAMLL         
Sbjct: 316  PLLESEDTESGK-------EKKEEEAKPVSYSYTFFHLIFALASMYSAMLL-SGWTSSND 367

Query: 1164 XXELIDVGWTSVWVRICTEWVTAALYVWTLVAPLVLPDREF 1286
              ++IDVGWTSVWVRICTEWVTA LYVW+L+AP++ PDREF
Sbjct: 368  SSDMIDVGWTSVWVRICTEWVTALLYVWSLLAPILFPDREF 408


>ref|XP_002516786.1| Membrane protein PB1A10.07c, putative [Ricinus communis]
            gi|223543874|gb|EEF45400.1| Membrane protein PB1A10.07c,
            putative [Ricinus communis]
          Length = 414

 Score =  498 bits (1282), Expect = e-138
 Identities = 252/401 (62%), Positives = 280/401 (69%)
 Frame = +3

Query: 84   VASGISRRSARLAYCGLFALSLIVSWILREFAAPLLEKLPWINTSSETLPTEWYQTSAVL 263
            VASGIS++SARLAYCGLF LSLIVSWILREF APL+EKLPWI  SS T   EW+Q  AVL
Sbjct: 22   VASGISKKSARLAYCGLFGLSLIVSWILREFGAPLIEKLPWIK-SSVTHSKEWFQIQAVL 80

Query: 264  RVSLGNFLFFTIFALIMIGVKDQNDRRDSWHHGGWIVKLVVWAVLIALMFFLPNVVVTIY 443
            RVSLGNFLFF IFALIMIGVKDQNDRRDSWHHGGWI K+V+W +L+ LMFF+PNVV+ IY
Sbjct: 81   RVSLGNFLFFAIFALIMIGVKDQNDRRDSWHHGGWIAKMVIWLLLLVLMFFMPNVVIAIY 140

Query: 444  ATLSKFGSGXXXXXXXXXXXDFTHTWNDAWVEKDEQKWYIALLAVSVICYIATYSFSGVL 623
              +SKFG+G           DFTH+WNDAWVEKDEQKWYIALL VSV+CY+A ++FSGVL
Sbjct: 141  GIISKFGAGLFLLVQVIILLDFTHSWNDAWVEKDEQKWYIALLVVSVVCYLAAFAFSGVL 200

Query: 624  FLWFNPSGQDCGLNIFFIVMTMILGFAFAIIALHPKVNGSLLPASVISVYCAYLCYSGLS 803
            F+WFNPSGQDCGLNIFFIVMTMIL F FAIIALHP VNGSLLPASVIS+YCAY+CY+GLS
Sbjct: 201  FIWFNPSGQDCGLNIFFIVMTMILAFVFAIIALHPTVNGSLLPASVISIYCAYVCYTGLS 260

Query: 804  SEPRDYACNGLHNHSKSVSIGXXXXXXXXXXXXXXYSAVRAGXXXXXXXXXXXXXXXXXX 983
            SEP DY CNGLHN +K+VS                YSAVRAG                  
Sbjct: 261  SEPHDYVCNGLHNKTKAVSTSTLILGMLTTILSVLYSAVRAGSSTTFLSPPSSPKASDAK 320

Query: 984  XLIESGDMESGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMYSAMLLXXXXXXXXX 1163
              +    +E GK                               SMYSAMLL         
Sbjct: 321  KPLLEEQLEEGK-------EKKETEARPVSYSYTFFHLIFALASMYSAMLL-SGWTSSSE 372

Query: 1164 XXELIDVGWTSVWVRICTEWVTAALYVWTLVAPLVLPDREF 1286
              +LIDVGWTSVWVRICTEWVTA LYVWTL+APL+ PDREF
Sbjct: 373  SSDLIDVGWTSVWVRICTEWVTAGLYVWTLLAPLLFPDREF 413


>ref|XP_003577418.1| PREDICTED: probable serine incorporator-like [Brachypodium
            distachyon]
          Length = 418

 Score =  491 bits (1265), Expect = e-136
 Identities = 243/401 (60%), Positives = 282/401 (70%)
 Frame = +3

Query: 87   ASGISRRSARLAYCGLFALSLIVSWILREFAAPLLEKLPWINTSSETLPTEWYQTSAVLR 266
            AS I+RRSARLAYCGLFA SLI+S++LR+FAAPLL+ +PWINT  ET P EW+Q + VLR
Sbjct: 23   ASSITRRSARLAYCGLFAASLILSFLLRQFAAPLLQHIPWINTFDETPPEEWFQMNVVLR 82

Query: 267  VSLGNFLFFTIFALIMIGVKDQNDRRDSWHHGGWIVKLVVWAVLIALMFFLPNVVVTIYA 446
            VSLGNFLFF IFAL+MIGVKDQNDRRD+WHHGGWI K+ VW VLI LMFF+PN+V+T+Y 
Sbjct: 83   VSLGNFLFFGIFALMMIGVKDQNDRRDAWHHGGWIAKIAVWVVLIVLMFFVPNIVITVYE 142

Query: 447  TLSKFGSGXXXXXXXXXXXDFTHTWNDAWVEKDEQKWYIALLAVSVICYIATYSFSGVLF 626
             LSKFGSG           DFT+ WND+WVEKDEQKW IALL V+V+CY++T++FSGVLF
Sbjct: 143  MLSKFGSGLFLLVQVVMLLDFTNNWNDSWVEKDEQKWEIALLVVTVVCYLSTFAFSGVLF 202

Query: 627  LWFNPSGQDCGLNIFFIVMTMILGFAFAIIALHPKVNGSLLPASVISVYCAYLCYSGLSS 806
            + FNPSG DCGLN+FFIVMT+IL FAFAIIALHP+VNGS++PASVISVYCAYLCYS LSS
Sbjct: 203  MLFNPSGHDCGLNVFFIVMTIILAFAFAIIALHPQVNGSVMPASVISVYCAYLCYSSLSS 262

Query: 807  EPRDYACNGLHNHSKSVSIGXXXXXXXXXXXXXXYSAVRAGXXXXXXXXXXXXXXXXXXX 986
            EP DYACNGLH HSK VS+G              YSAVRAG                   
Sbjct: 263  EPDDYACNGLHMHSKQVSVGALILGMLTTVLSVVYSAVRAGSSTTFLSPPSSPRSGTKNP 322

Query: 987  LIESGDMESGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMYSAMLLXXXXXXXXXX 1166
            L+   ++E GK                               SMYSAMLL          
Sbjct: 323  LLGDANVEEGK-----GEDTTGSEPRPVSYSYTFFHLIFALASMYSAMLLTGWTSAGSES 377

Query: 1167 XELIDVGWTSVWVRICTEWVTAALYVWTLVAPLVLPDREFS 1289
             EL+DVGWT+VWVRIC EW TAALY+WTLVAPL+ PDR+FS
Sbjct: 378  GELMDVGWTTVWVRICMEWATAALYIWTLVAPLLFPDRDFS 418


>gb|ABR16232.1| unknown [Picea sitchensis]
          Length = 407

 Score =  491 bits (1265), Expect = e-136
 Identities = 240/401 (59%), Positives = 276/401 (68%)
 Frame = +3

Query: 84   VASGISRRSARLAYCGLFALSLIVSWILREFAAPLLEKLPWINTSSETLPTEWYQTSAVL 263
            +A  ++RRSARLAYCGLF  SLI++WILRE AAPL+EK+PWIN    T   EW+QTSAVL
Sbjct: 13   LAGTVTRRSARLAYCGLFGFSLIIAWILREVAAPLMEKIPWINDFVHTPTKEWFQTSAVL 72

Query: 264  RVSLGNFLFFTIFALIMIGVKDQNDRRDSWHHGGWIVKLVVWAVLIALMFFLPNVVVTIY 443
            RVSLGNFLFFTIFA+ MIG+K Q D RD WHHGGWIVK++ WA+L+ LMFFLPN V+++Y
Sbjct: 73   RVSLGNFLFFTIFAVTMIGIKTQKDIRDGWHHGGWIVKIICWALLVVLMFFLPNSVISVY 132

Query: 444  ATLSKFGSGXXXXXXXXXXXDFTHTWNDAWVEKDEQKWYIALLAVSVICYIATYSFSGVL 623
             TLSKFGSG           DFTHTWNDAWV KDEQ WYIALL VS++CY+ T++FSG+L
Sbjct: 133  ETLSKFGSGLFLLVQVIILLDFTHTWNDAWVAKDEQFWYIALLVVSIVCYLVTFAFSGLL 192

Query: 624  FLWFNPSGQDCGLNIFFIVMTMILGFAFAIIALHPKVNGSLLPASVISVYCAYLCYSGLS 803
            F WFNPSG DC LN+FFIVMTMIL FAFA+IALHP+V+GSLLPASVISVYCAYLCY GLS
Sbjct: 193  FYWFNPSGHDCSLNVFFIVMTMILAFAFAVIALHPQVSGSLLPASVISVYCAYLCYCGLS 252

Query: 804  SEPRDYACNGLHNHSKSVSIGXXXXXXXXXXXXXXYSAVRAGXXXXXXXXXXXXXXXXXX 983
            SEPRDY CNGLHNH+ +VS G              YSAVRAG                  
Sbjct: 253  SEPRDYGCNGLHNHTAAVSTGTLILGMLTTVLSVIYSAVRAGSSTTFLSPPTSPRTGSEK 312

Query: 984  XLIESGDMESGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMYSAMLLXXXXXXXXX 1163
             L+ES D+E G+                               SMYSAMLL         
Sbjct: 313  PLLESKDVEEGQ------KDEKKDEGRPVTYSYTFFHLIFALASMYSAMLLTGWTSSTKD 366

Query: 1164 XXELIDVGWTSVWVRICTEWVTAALYVWTLVAPLVLPDREF 1286
              EL+DVGW SVWVRICTEW+TA LYVWTL+AP+  PDREF
Sbjct: 367  SEELVDVGWPSVWVRICTEWITAGLYVWTLLAPIFFPDREF 407


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