BLASTX nr result

ID: Dioscorea21_contig00003195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003195
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002459736.1| hypothetical protein SORBIDRAFT_02g009590 [S...   500   e-139
gb|EEC70450.1| hypothetical protein OsI_01481 [Oryza sativa Indi...   500   e-139
ref|NP_001059424.1| Os07g0301200 [Oryza sativa Japonica Group] g...   498   e-138
ref|NP_001169296.1| uncharacterized protein LOC100383160 [Zea ma...   496   e-138
emb|CBI23263.3| unnamed protein product [Vitis vinifera]              488   e-136

>ref|XP_002459736.1| hypothetical protein SORBIDRAFT_02g009590 [Sorghum bicolor]
           gi|241923113|gb|EER96257.1| hypothetical protein
           SORBIDRAFT_02g009590 [Sorghum bicolor]
          Length = 512

 Score =  500 bits (1288), Expect = e-139
 Identities = 245/299 (81%), Positives = 275/299 (91%)
 Frame = -2

Query: 899 TGNKTKDSKYKALNSFAESGLPAEVLDCCKSFSKPSPIQSHAWPFLLDGRDFIGIAATGS 720
           TG  ++D KY  L SF+ + LP++VLDCC +F++PSPIQ+HAWPFLLDGRDFIGIAATGS
Sbjct: 81  TGKGSEDPKYAPLRSFSAAELPSQVLDCCSAFARPSPIQAHAWPFLLDGRDFIGIAATGS 140

Query: 719 GKTVAFGVPALMHILQXXXXXXXXKAVPRCLVLSPTRELAQQIADVLCDAGSPCGLETVC 540
           GKT+AFGVPALMHI +        KAVPRCLVLSPTRELAQQIADVL +AG+PCG+++VC
Sbjct: 141 GKTIAFGVPALMHIRKKVGGKAVKKAVPRCLVLSPTRELAQQIADVLSEAGAPCGIKSVC 200

Query: 539 LYGGTSKGPQISSLKSGVDIVIGTPGRMKDLIEMGICNLGDVSFVVLDEADRMLDMGFEP 360
           LYGGT K PQIS+LKSGVDIVIGTPGRMKDLIEMG+C L +VSFVVLDEADRMLDMGFEP
Sbjct: 201 LYGGTKKEPQISALKSGVDIVIGTPGRMKDLIEMGVCRLNEVSFVVLDEADRMLDMGFEP 260

Query: 359 EVRSILSQTSSVRQMVMFSATWPLAVHQLAQEFMDPDPVKVVIGSEDLAANHDVMQIVEV 180
           EVR+ILSQTSSVRQMVMFSATWPLAVH+LAQEFMDP+P+KVVIGSEDLAANHDVMQIVEV
Sbjct: 261 EVRAILSQTSSVRQMVMFSATWPLAVHKLAQEFMDPNPIKVVIGSEDLAANHDVMQIVEV 320

Query: 179 LDDRSRDARLVALLEKYHQSQRNRVLVFVLYKKEAARVETMLQRRGWKAVSVHGDKSQH 3
           LDDR+RD+RL+ALL+KYHQ+Q NRVLVFVLYKKEAARVETMLQRRGWKAVSVHGDK+QH
Sbjct: 321 LDDRTRDSRLLALLDKYHQAQSNRVLVFVLYKKEAARVETMLQRRGWKAVSVHGDKAQH 379


>gb|EEC70450.1| hypothetical protein OsI_01481 [Oryza sativa Indica Group]
          Length = 512

 Score =  500 bits (1287), Expect = e-139
 Identities = 245/299 (81%), Positives = 272/299 (90%)
 Frame = -2

Query: 899 TGNKTKDSKYKALNSFAESGLPAEVLDCCKSFSKPSPIQSHAWPFLLDGRDFIGIAATGS 720
           TG  + D+KY  L+SFA + LP +VLDCCK F +PSPIQ++AWP+LLDGRDFIGIAATGS
Sbjct: 81  TGKGSADAKYAPLSSFAATALPPQVLDCCKGFERPSPIQAYAWPYLLDGRDFIGIAATGS 140

Query: 719 GKTVAFGVPALMHILQXXXXXXXXKAVPRCLVLSPTRELAQQIADVLCDAGSPCGLETVC 540
           GKT+AFGVPALMH+ +        K VPR LVLSPTRELAQQIADVLC+AG+PCG+ +VC
Sbjct: 141 GKTIAFGVPALMHVRRKMGEKSAKKGVPRVLVLSPTRELAQQIADVLCEAGAPCGISSVC 200

Query: 539 LYGGTSKGPQISSLKSGVDIVIGTPGRMKDLIEMGICNLGDVSFVVLDEADRMLDMGFEP 360
           LYGGTSKGPQIS+LKSGVDIVIGTPGRMKDLIEMGIC L DVSFVVLDEADRMLDMGFEP
Sbjct: 201 LYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVVLDEADRMLDMGFEP 260

Query: 359 EVRSILSQTSSVRQMVMFSATWPLAVHQLAQEFMDPDPVKVVIGSEDLAANHDVMQIVEV 180
           EVR+ILSQT+SVRQMVMFSATWP AVHQLAQEFMDP+P+KVVIGSEDLAANHDVMQIVEV
Sbjct: 261 EVRAILSQTASVRQMVMFSATWPPAVHQLAQEFMDPNPIKVVIGSEDLAANHDVMQIVEV 320

Query: 179 LDDRSRDARLVALLEKYHQSQRNRVLVFVLYKKEAARVETMLQRRGWKAVSVHGDKSQH 3
           LDDRSRD+RLVALL+KYH++QRNRVLVFVLYK+EA RVETMLQRRGW AVSVHGDK+QH
Sbjct: 321 LDDRSRDSRLVALLDKYHKAQRNRVLVFVLYKREATRVETMLQRRGWSAVSVHGDKAQH 379


>ref|NP_001059424.1| Os07g0301200 [Oryza sativa Japonica Group]
           gi|75325214|sp|Q6YS30.1|RH5_ORYSJ RecName: Full=DEAD-box
           ATP-dependent RNA helicase 5 gi|34394349|dbj|BAC84904.1|
           putative RNA helicase [Oryza sativa Japonica Group]
           gi|113610960|dbj|BAF21338.1| Os07g0301200 [Oryza sativa
           Japonica Group]
          Length = 512

 Score =  498 bits (1281), Expect = e-138
 Identities = 244/299 (81%), Positives = 271/299 (90%)
 Frame = -2

Query: 899 TGNKTKDSKYKALNSFAESGLPAEVLDCCKSFSKPSPIQSHAWPFLLDGRDFIGIAATGS 720
           TG  + D+KY  L+SFA + LP +VLDCCK F +PSPIQ++AWP+LLDGRDFIGIAATGS
Sbjct: 81  TGKGSADAKYAPLSSFAATALPPQVLDCCKGFERPSPIQAYAWPYLLDGRDFIGIAATGS 140

Query: 719 GKTVAFGVPALMHILQXXXXXXXXKAVPRCLVLSPTRELAQQIADVLCDAGSPCGLETVC 540
           GKT+AFGVPALMH+ +        K VPR LVLSPTRELAQQIADVLC+AG+PCG+ +VC
Sbjct: 141 GKTIAFGVPALMHVRRKMGEKSAKKGVPRVLVLSPTRELAQQIADVLCEAGAPCGISSVC 200

Query: 539 LYGGTSKGPQISSLKSGVDIVIGTPGRMKDLIEMGICNLGDVSFVVLDEADRMLDMGFEP 360
           LYGGTSKGPQIS+LKSGVDIVIGTPGRMKDLIEMGIC L DVSFVVLDEADRMLDMGFEP
Sbjct: 201 LYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVVLDEADRMLDMGFEP 260

Query: 359 EVRSILSQTSSVRQMVMFSATWPLAVHQLAQEFMDPDPVKVVIGSEDLAANHDVMQIVEV 180
           EVR+ILSQT+SVRQ VMFSATWP AVHQLAQEFMDP+P+KVVIGSEDLAANHDVMQIVEV
Sbjct: 261 EVRAILSQTASVRQTVMFSATWPPAVHQLAQEFMDPNPIKVVIGSEDLAANHDVMQIVEV 320

Query: 179 LDDRSRDARLVALLEKYHQSQRNRVLVFVLYKKEAARVETMLQRRGWKAVSVHGDKSQH 3
           LDDRSRD+RLVALL+KYH++QRNRVLVFVLYK+EA RVETMLQRRGW AVSVHGDK+QH
Sbjct: 321 LDDRSRDSRLVALLDKYHKAQRNRVLVFVLYKREATRVETMLQRRGWSAVSVHGDKAQH 379


>ref|NP_001169296.1| uncharacterized protein LOC100383160 [Zea mays]
           gi|224028479|gb|ACN33315.1| unknown [Zea mays]
           gi|414884306|tpg|DAA60320.1| TPA: putative DEAD-box
           ATP-dependent RNA helicase family protein [Zea mays]
          Length = 508

 Score =  496 bits (1278), Expect = e-138
 Identities = 243/299 (81%), Positives = 275/299 (91%)
 Frame = -2

Query: 899 TGNKTKDSKYKALNSFAESGLPAEVLDCCKSFSKPSPIQSHAWPFLLDGRDFIGIAATGS 720
           TG  ++D KY  L SF+ + LP++VL+CC +F++PSPIQ+HAWPFLLDGRDFIGIAATGS
Sbjct: 77  TGKGSEDPKYAPLRSFSAAELPSQVLECCSAFARPSPIQAHAWPFLLDGRDFIGIAATGS 136

Query: 719 GKTVAFGVPALMHILQXXXXXXXXKAVPRCLVLSPTRELAQQIADVLCDAGSPCGLETVC 540
           GKT+AFGVPALMHI +        KAVPRCLVLSPTRELAQQIADVL +AG+PCG+++VC
Sbjct: 137 GKTIAFGVPALMHIRKKVGGKAGKKAVPRCLVLSPTRELAQQIADVLSEAGAPCGIKSVC 196

Query: 539 LYGGTSKGPQISSLKSGVDIVIGTPGRMKDLIEMGICNLGDVSFVVLDEADRMLDMGFEP 360
           LYGGT K PQIS+LKSGVDIVIGTPGRMKDLIEMG+C L +VSFVVLDEADRMLD+GFEP
Sbjct: 197 LYGGTKKEPQISALKSGVDIVIGTPGRMKDLIEMGVCCLNEVSFVVLDEADRMLDLGFEP 256

Query: 359 EVRSILSQTSSVRQMVMFSATWPLAVHQLAQEFMDPDPVKVVIGSEDLAANHDVMQIVEV 180
           EVR+ILSQTSSVRQMVMFSATWPLAVH+LAQEFMDP+P+KVVIGSEDLAANHDVMQIVEV
Sbjct: 257 EVRAILSQTSSVRQMVMFSATWPLAVHKLAQEFMDPNPIKVVIGSEDLAANHDVMQIVEV 316

Query: 179 LDDRSRDARLVALLEKYHQSQRNRVLVFVLYKKEAARVETMLQRRGWKAVSVHGDKSQH 3
           LDDR+RD+RL+ALL+KYHQ+Q NRVLVFVLYKKEAARVETMLQRRGWKAVSVHGDK+QH
Sbjct: 317 LDDRTRDSRLLALLDKYHQAQSNRVLVFVLYKKEAARVETMLQRRGWKAVSVHGDKAQH 375


>emb|CBI23263.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score =  488 bits (1257), Expect = e-136
 Identities = 248/324 (76%), Positives = 272/324 (83%), Gaps = 1/324 (0%)
 Frame = -2

Query: 974  KKKKDGVNE-LKXXXXXXXXXXXXXVTGNKTKDSKYKALNSFAESGLPAEVLDCCKSFSK 798
            KK+K+G  E LK             VTG   K+SKY A  SFAES LP +VL+CC++FS+
Sbjct: 171  KKEKEGEEEGLKDEDDKESRGACVAVTGKDAKESKYAAFKSFAESKLPDDVLECCRNFSQ 230

Query: 797  PSPIQSHAWPFLLDGRDFIGIAATGSGKTVAFGVPALMHILQXXXXXXXXKAVPRCLVLS 618
            PSPIQSHAWPFLLD RDFIGIAATGSGKT+AFGVPA+MH+L            P CLVLS
Sbjct: 231  PSPIQSHAWPFLLDHRDFIGIAATGSGKTLAFGVPAMMHVLSKRKSKTSKGVNPLCLVLS 290

Query: 617  PTRELAQQIADVLCDAGSPCGLETVCLYGGTSKGPQISSLKSGVDIVIGTPGRMKDLIEM 438
            PTRELAQQI+DVLC+AG  CG+++VCLYGGTSKGPQISSLKSGVDIVIGTPGR+KDLIEM
Sbjct: 291  PTRELAQQISDVLCEAGKHCGVKSVCLYGGTSKGPQISSLKSGVDIVIGTPGRLKDLIEM 350

Query: 437  GICNLGDVSFVVLDEADRMLDMGFEPEVRSILSQTSSVRQMVMFSATWPLAVHQLAQEFM 258
            G+C L +VSFVVLDEADRMLDMGFEPEVRSILSQT   RQMVMFSATWPL VHQLAQEFM
Sbjct: 351  GVCCLTEVSFVVLDEADRMLDMGFEPEVRSILSQTCPARQMVMFSATWPLPVHQLAQEFM 410

Query: 257  DPDPVKVVIGSEDLAANHDVMQIVEVLDDRSRDARLVALLEKYHQSQRNRVLVFVLYKKE 78
            DP+PVKVVIGSEDLAANHDVMQIVEVLDDRSRD RL+ LL KYH+SQRNRVLVFVLYKKE
Sbjct: 411  DPNPVKVVIGSEDLAANHDVMQIVEVLDDRSRDERLLTLLGKYHKSQRNRVLVFVLYKKE 470

Query: 77   AARVETMLQRRGWKAVSVHGDKSQ 6
            AARVE MLQRRGW  VS+HGDK+Q
Sbjct: 471  AARVENMLQRRGWNVVSIHGDKAQ 494


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