BLASTX nr result
ID: Dioscorea21_contig00003186
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00003186
(861 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACF06492.1| ribosomal L9-like protein [Elaeis guineensis] 281 1e-73
ref|NP_001063520.1| Os09g0485900 [Oryza sativa Japonica Group] g... 281 2e-73
dbj|BAA19798.1| YK426 [Oryza sativa (japonica cultivar-group)] 281 2e-73
ref|XP_002518960.1| 60S ribosomal protein L9, putative [Ricinus ... 276 4e-72
gb|ACG24522.1| 60S ribosomal protein L9 [Zea mays] gi|195624144|... 276 4e-72
>gb|ACF06492.1| ribosomal L9-like protein [Elaeis guineensis]
Length = 189
Score = 281 bits (720), Expect = 1e-73
Identities = 142/189 (75%), Positives = 153/189 (80%)
Frame = +1
Query: 82 MKTILSSQTMDIPXXXXXXXXXXXXXXXGPRGKLTRNFKHLNLDFELVDGGRKLKVDAWF 261
MKTILS+ TM+IP GPRGKL RNFKHLNLDF+L++GGRKLKVDAWF
Sbjct: 1 MKTILSTDTMEIPEGVTVRVKAKMIEVEGPRGKLARNFKHLNLDFQLIEGGRKLKVDAWF 60
Query: 262 GSRKTMAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPXXXXXXXXXXXXXXXXFLGEK 441
GSRKT AAIRTA+SHVQNLITGVTKGYRYKMRFVYAHFP FLGEK
Sbjct: 61 GSRKTTAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNNNASIEIRNFLGEK 120
Query: 442 KVRKVDMLQGVTITRSEKVKDELVLDGNDVELVSRSAALINQKCHVKNKDIRKFLDGIYV 621
KVRKVDML+GVTI RS+KVKDELVLDGND+ELVSRSAALINQKCHVKNKDIRKFLDGIYV
Sbjct: 121 KVRKVDMLEGVTILRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYV 180
Query: 622 SEKGTMADE 648
SEKGT+ +E
Sbjct: 181 SEKGTIVEE 189
>ref|NP_001063520.1| Os09g0485900 [Oryza sativa Japonica Group]
gi|109940148|sp|P49210.3|RL9_ORYSJ RecName: Full=60S
ribosomal protein L9 gi|315113252|pdb|3IZR|F Chain F,
Localization Of The Large Subunit Ribosomal Proteins
Into A 5.5 A Cryo-Em Map Of Triticum Aestivum
Translating 80s Ribosome gi|33087067|gb|AAP92747.1|
ribosomal L9-like protein [Oryza sativa Japonica Group]
gi|113631753|dbj|BAF25434.1| Os09g0485900 [Oryza sativa
Japonica Group] gi|125564174|gb|EAZ09554.1| hypothetical
protein OsI_31831 [Oryza sativa Indica Group]
gi|125606139|gb|EAZ45175.1| hypothetical protein
OsJ_29817 [Oryza sativa Japonica Group]
gi|149392689|gb|ABR26147.1| 60S ribosomal protein l9
[Oryza sativa Indica Group]
Length = 190
Score = 281 bits (718), Expect = 2e-73
Identities = 140/189 (74%), Positives = 156/189 (82%)
Frame = +1
Query: 82 MKTILSSQTMDIPXXXXXXXXXXXXXXXGPRGKLTRNFKHLNLDFELVDGGRKLKVDAWF 261
MKTIL+S+TM+IP GPRGKLTRNFKHLNLDF+L++GGRKL+VDAWF
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 262 GSRKTMAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPXXXXXXXXXXXXXXXXFLGEK 441
G+R+TMAAIRTA+SHVQNLITGVTKGYRYKMRFVYAHFP FLGEK
Sbjct: 61 GTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEK 120
Query: 442 KVRKVDMLQGVTITRSEKVKDELVLDGNDVELVSRSAALINQKCHVKNKDIRKFLDGIYV 621
KVRKVDML+GVTI RSEKVKDELVLDGND+ELVSRSAALINQKCHVKNKDIRKFLDGIYV
Sbjct: 121 KVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYV 180
Query: 622 SEKGTMADE 648
S+KGT+ ++
Sbjct: 181 SDKGTITED 189
>dbj|BAA19798.1| YK426 [Oryza sativa (japonica cultivar-group)]
Length = 190
Score = 281 bits (718), Expect = 2e-73
Identities = 140/189 (74%), Positives = 156/189 (82%)
Frame = +1
Query: 82 MKTILSSQTMDIPXXXXXXXXXXXXXXXGPRGKLTRNFKHLNLDFELVDGGRKLKVDAWF 261
MKTIL+S+TM+IP GPRGKLTRNFKHLNLDF+L++GGRKL+VDAWF
Sbjct: 1 MKTILASETMEIPEGLTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 262 GSRKTMAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPXXXXXXXXXXXXXXXXFLGEK 441
G+R+TMAAIRTA+SHVQNLITGVTKGYRYKMRFVYAHFP FLGEK
Sbjct: 61 GTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEK 120
Query: 442 KVRKVDMLQGVTITRSEKVKDELVLDGNDVELVSRSAALINQKCHVKNKDIRKFLDGIYV 621
KVRKVDML+GVTI RSEKVKDELVLDGND+ELVSRSAALINQKCHVKNKDIRKFLDGIYV
Sbjct: 121 KVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYV 180
Query: 622 SEKGTMADE 648
S+KGT+ ++
Sbjct: 181 SDKGTITED 189
>ref|XP_002518960.1| 60S ribosomal protein L9, putative [Ricinus communis]
gi|223541947|gb|EEF43493.1| 60S ribosomal protein L9,
putative [Ricinus communis]
Length = 194
Score = 276 bits (706), Expect = 4e-72
Identities = 142/193 (73%), Positives = 154/193 (79%), Gaps = 4/193 (2%)
Frame = +1
Query: 82 MKTILSSQTMDIPXXXXXXXXXXXXXXXGPRGKLTRNFKHLNLDFELVD----GGRKLKV 249
MKTILSS+TMDIP GPRGKLTRNFKHLNLDF+L+ G RKLK+
Sbjct: 1 MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLTRNFKHLNLDFQLIKDEETGKRKLKI 60
Query: 250 DAWFGSRKTMAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPXXXXXXXXXXXXXXXXF 429
+AWFGSRKT AAIRTALSHV+NLITGVTKGYRYKMRFVYAHFP F
Sbjct: 61 EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNSAIEIRNF 120
Query: 430 LGEKKVRKVDMLQGVTITRSEKVKDELVLDGNDVELVSRSAALINQKCHVKNKDIRKFLD 609
LGEKKVRKVDML+GVT+ RSEKVKDELVLDGND+ELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLEGVTVVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
Query: 610 GIYVSEKGTMADE 648
GIYVSEKGT+A++
Sbjct: 181 GIYVSEKGTVAEQ 193
>gb|ACG24522.1| 60S ribosomal protein L9 [Zea mays] gi|195624144|gb|ACG33902.1| 60S
ribosomal protein L9 [Zea mays]
gi|413942577|gb|AFW75226.1| 60S ribosomal protein L9
[Zea mays]
Length = 190
Score = 276 bits (706), Expect = 4e-72
Identities = 140/189 (74%), Positives = 151/189 (79%)
Frame = +1
Query: 82 MKTILSSQTMDIPXXXXXXXXXXXXXXXGPRGKLTRNFKHLNLDFELVDGGRKLKVDAWF 261
MKTIL+S+TMDIP GPRGKLTRNFKHLNLDF+L +GGRKLKVDAWF
Sbjct: 1 MKTILASETMDIPEGVTVTVAAKLVTVEGPRGKLTRNFKHLNLDFQLQEGGRKLKVDAWF 60
Query: 262 GSRKTMAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPXXXXXXXXXXXXXXXXFLGEK 441
G+R+TMAAIRTA+SHVQNLI GVTKGYRYKMRFVYAHFP FLGEK
Sbjct: 61 GTRRTMAAIRTAISHVQNLIKGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEK 120
Query: 442 KVRKVDMLQGVTITRSEKVKDELVLDGNDVELVSRSAALINQKCHVKNKDIRKFLDGIYV 621
KVRKVDML GVTI RSEKVKDEL+LDGNDVELVSRSAALINQKCHVK KDIRKFLDGIYV
Sbjct: 121 KVRKVDMLDGVTILRSEKVKDELILDGNDVELVSRSAALINQKCHVKKKDIRKFLDGIYV 180
Query: 622 SEKGTMADE 648
S+KG + +E
Sbjct: 181 SDKGVIEEE 189