BLASTX nr result

ID: Dioscorea21_contig00003183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003183
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001761820.1| predicted protein [Physcomitrella patens sub...    72   6e-11
ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-l...    70   2e-10
dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]     70   2e-10
dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]     70   2e-10
ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-l...    70   2e-10

>ref|XP_001761820.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162686875|gb|EDQ73261.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 439

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/44 (72%), Positives = 40/44 (90%)
 Frame = -3

Query: 133 GPAVSQFPTTSLYIGDLEANVTDAQLFDMFSQVGHVVSVRVCRD 2
           GPA +QF +TSLY+GDLE NV++AQL++MFSQVG VVS+RVCRD
Sbjct: 15  GPAPTQFVSTSLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRD 58


>ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
          Length = 646

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/44 (72%), Positives = 39/44 (88%)
 Frame = -3

Query: 133 GPAVSQFPTTSLYIGDLEANVTDAQLFDMFSQVGHVVSVRVCRD 2
           G A +QF TTSLY+GDL+ NVTDAQL+D+F+Q+G VVSVRVCRD
Sbjct: 19  GAAGNQFVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRD 62


>dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 530

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = -3

Query: 133 GPAVSQFPTTSLYIGDLEANVTDAQLFDMFSQVGHVVSVRVCRD 2
           G A    PTTSLY+GDLEANVTD+QL+++FSQ G VVSVRVCRD
Sbjct: 113 GAAQQPLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRD 156


>dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = -3

Query: 133 GPAVSQFPTTSLYIGDLEANVTDAQLFDMFSQVGHVVSVRVCRD 2
           G A    PTTSLY+GDLEANVTD+QL+++FSQ G VVSVRVCRD
Sbjct: 113 GAAQQPLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRD 156


>ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
          Length = 651

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/44 (72%), Positives = 39/44 (88%)
 Frame = -3

Query: 133 GPAVSQFPTTSLYIGDLEANVTDAQLFDMFSQVGHVVSVRVCRD 2
           G A +QF TTSLY+GDL+ NVTDAQL+D+F+Q+G VVSVRVCRD
Sbjct: 22  GGAGNQFVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRD 65


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