BLASTX nr result
ID: Dioscorea21_contig00003180
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00003180
(1804 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003593000.1| Serine hydroxymethyltransferase [Medicago tr... 754 0.0
ref|XP_003532992.1| PREDICTED: serine hydroxymethyltransferase 1... 739 0.0
ref|XP_003540162.1| PREDICTED: serine hydroxymethyltransferase 1... 739 0.0
ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1... 732 0.0
ref|XP_002285823.1| PREDICTED: serine hydroxymethyltransferase 1... 723 0.0
>ref|XP_003593000.1| Serine hydroxymethyltransferase [Medicago truncatula]
gi|355482048|gb|AES63251.1| Serine
hydroxymethyltransferase [Medicago truncatula]
Length = 593
Score = 754 bits (1948), Expect = 0.0
Identities = 379/548 (69%), Positives = 435/548 (79%), Gaps = 11/548 (2%)
Frame = -3
Query: 1613 MDLSHHQSNLSLGFSSHRA------PASEDSISPGV-----DPCSRAPSVPLQLLDQQSE 1467
MDLSHHQSNLSL FSS A P +DSI+ + DP + P+VPLQL++ Q+E
Sbjct: 1 MDLSHHQSNLSLNFSSSHASPPPRPPIPDDSIALHLESSFRDPSNPVPTVPLQLMEPQTE 60
Query: 1466 NQRDGPARXXXXXXXXXXXXXXEFRILGYSMCIKRQRRGEXXXXXXXXXXXXSKRAKSEP 1287
+ +G A EFRILG+SMCIKR+R E S R
Sbjct: 61 KE-NGNAIDIESNNDEDDREVEEFRILGHSMCIKRRRDSESSTITTKRASVESDRGDRLL 119
Query: 1286 DLETRRASVRSWGLQPLPVADPDVFDIMEKEKQRQVRGIELIASENFVCRAVLDALGSHL 1107
DLE+R+A+VRSWG QPL VADPD+++I+EKEK+RQ +GIELIASENFVCRAV++ALGSHL
Sbjct: 120 DLESRKAAVRSWGDQPLQVADPDIYEIIEKEKKRQFKGIELIASENFVCRAVMEALGSHL 179
Query: 1106 TNKYSEGMPGSRYYGGNEYIDQIERLCHDRALAAFDLDPESWGVNVQPYSCTSANFAVFT 927
TNKYSEGMPG+RYYGGN+YID+IE LC +RALAAF+LDP+ WGVNVQPYSCTSANFAV+T
Sbjct: 180 TNKYSEGMPGARYYGGNQYIDEIETLCCERALAAFNLDPKCWGVNVQPYSCTSANFAVYT 239
Query: 926 GLLLPKDRIMGLDSPSGGHVSHGYYTPSGKKISAASIFFENLSYKVNPMTGYIDYDKLEE 747
GLL P DRIMGLD+PSGG+ SHGYYTP+GKK+S ASIFFE+L+YK+NP +G+IDYDKLEE
Sbjct: 240 GLLAPGDRIMGLDTPSGGNTSHGYYTPNGKKVSGASIFFESLAYKINPQSGFIDYDKLEE 299
Query: 746 RAVDFHPKILICGGSSYPREWDYARLRHVADKCGAVLMCDMAHISGLVAAKECLSPFDYC 567
RA+DF PKILICGGSSYPREWDYAR RHVADKCGAVL+CDMA ISG++AAKEC++PFDYC
Sbjct: 300 RALDFRPKILICGGSSYPREWDYARFRHVADKCGAVLLCDMAQISGIIAAKECVNPFDYC 359
Query: 566 DIVTSTTHKSLRGPRGGIIXXXXXXXXXXXXFSLYQTDESDSYDFEERINFAVFPSLQGG 387
D+VTSTTHKSLRGPRGGII L Q ESD YDFEE+INFAVFPSLQGG
Sbjct: 360 DVVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLTQGHESDQYDFEEKINFAVFPSLQGG 419
Query: 386 PHNNHIAALAIALKQVATPEYKAYIQQVKKNAQALASALLRRKCKLVTGGTDNHXXXXXX 207
PHNNHIAALAIALKQVATPEYKAY+QQVKKNAQALASALLRRKC+LVTGGTDNH
Sbjct: 420 PHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKCRLVTGGTDNHLILWDL 479
Query: 206 XXXXXXXRNFEKVCEACHITLNKTPIFGENGAISPGGIRIGTPAMTTRGCLEGDFESIAD 27
+ +EKVCEACHITLNK IFG+NG I PGG+RIGTPAMT+RGCLE DFE++AD
Sbjct: 480 RPLGLTGKFYEKVCEACHITLNKIAIFGDNGIIIPGGVRIGTPAMTSRGCLEADFETMAD 539
Query: 26 FLLRAVQI 3
FL RA QI
Sbjct: 540 FLFRAAQI 547
>ref|XP_003532992.1| PREDICTED: serine hydroxymethyltransferase 1-like [Glycine max]
Length = 566
Score = 739 bits (1907), Expect = 0.0
Identities = 372/537 (69%), Positives = 421/537 (78%)
Frame = -3
Query: 1613 MDLSHHQSNLSLGFSSHRAPASEDSISPGVDPCSRAPSVPLQLLDQQSENQRDGPARXXX 1434
MDLSH QSNLSLGFSS A SP P P VPLQL++ Q+EN G
Sbjct: 1 MDLSHPQSNLSLGFSSSHA-------SP---PRRSDPPVPLQLMEPQTEN---GNNLDVE 47
Query: 1433 XXXXXXXXXXXEFRILGYSMCIKRQRRGEXXXXXXXXXXXXSKRAKSEPDLETRRASVRS 1254
EFRILG+SMC+KR+R + KR EPDL+ R+A+VR+
Sbjct: 48 SDDDDDDKEVEEFRILGHSMCLKRRRDCDSSSSSAAAA----KRVSVEPDLDARKAAVRA 103
Query: 1253 WGLQPLPVADPDVFDIMEKEKQRQVRGIELIASENFVCRAVLDALGSHLTNKYSEGMPGS 1074
WG QPL +ADPD+ +IMEKEK+RQ GIELIASENFVCRAV++ALGSHLTNKYSEGMPGS
Sbjct: 104 WGCQPLSIADPDIHEIMEKEKKRQFCGIELIASENFVCRAVMEALGSHLTNKYSEGMPGS 163
Query: 1073 RYYGGNEYIDQIERLCHDRALAAFDLDPESWGVNVQPYSCTSANFAVFTGLLLPKDRIMG 894
RYYGGN+YID+IE LC +RAL AF LDP+ WGVNVQPYSCTSANF+V+TGLLLP DRIMG
Sbjct: 164 RYYGGNQYIDEIETLCCERALNAFGLDPKCWGVNVQPYSCTSANFSVYTGLLLPGDRIMG 223
Query: 893 LDSPSGGHVSHGYYTPSGKKISAASIFFENLSYKVNPMTGYIDYDKLEERAVDFHPKILI 714
LD+PSGG+ SHGYYTP+GKK+S ASIFFE+L YKVNP TGYIDYDKLEERA+DF PKILI
Sbjct: 224 LDTPSGGNTSHGYYTPNGKKVSGASIFFESLPYKVNPQTGYIDYDKLEERALDFRPKILI 283
Query: 713 CGGSSYPREWDYARLRHVADKCGAVLMCDMAHISGLVAAKECLSPFDYCDIVTSTTHKSL 534
CGGSSYPREWDYAR RH+ADKCGAVL+CDMA ISG++AAKEC++PFDYCDIVTSTTHKSL
Sbjct: 284 CGGSSYPREWDYARFRHIADKCGAVLLCDMAQISGIIAAKECVNPFDYCDIVTSTTHKSL 343
Query: 533 RGPRGGIIXXXXXXXXXXXXFSLYQTDESDSYDFEERINFAVFPSLQGGPHNNHIAALAI 354
RGPRGGII L Q ESD YDFEE+INFAVFPS+QGGPHNNHIAALAI
Sbjct: 344 RGPRGGIIFYRKGTKPRNRGILLSQGHESDQYDFEEKINFAVFPSMQGGPHNNHIAALAI 403
Query: 353 ALKQVATPEYKAYIQQVKKNAQALASALLRRKCKLVTGGTDNHXXXXXXXXXXXXXRNFE 174
ALKQVATPEYKAY+QQVKKNAQALA ALLRRKC+LVTGGTDNH + +E
Sbjct: 404 ALKQVATPEYKAYMQQVKKNAQALACALLRRKCRLVTGGTDNHLILWDLRPLGLTGKFYE 463
Query: 173 KVCEACHITLNKTPIFGENGAISPGGIRIGTPAMTTRGCLEGDFESIADFLLRAVQI 3
KVCE CHITLNK IFG+NG I PGG+R+GTPAMT+RGCLE DFE++A+FL+RA QI
Sbjct: 464 KVCETCHITLNKIAIFGDNGTIIPGGVRVGTPAMTSRGCLEADFETMAEFLIRAAQI 520
>ref|XP_003540162.1| PREDICTED: serine hydroxymethyltransferase 1-like [Glycine max]
Length = 563
Score = 739 bits (1907), Expect = 0.0
Identities = 372/537 (69%), Positives = 420/537 (78%)
Frame = -3
Query: 1613 MDLSHHQSNLSLGFSSHRAPASEDSISPGVDPCSRAPSVPLQLLDQQSENQRDGPARXXX 1434
MDLSH QSNLSLGFSS A SP P P VPLQL++ Q+EN
Sbjct: 1 MDLSHPQSNLSLGFSSSHA-------SP---PPRSDPPVPLQLMEPQTEN-----GNLDV 45
Query: 1433 XXXXXXXXXXXEFRILGYSMCIKRQRRGEXXXXXXXXXXXXSKRAKSEPDLETRRASVRS 1254
EFRILG+SMC+KR+R + KR EPDL+ R+A+VR+
Sbjct: 46 ESDDDEDKEVEEFRILGHSMCLKRRRDCDSSSSSSAA-----KRVSVEPDLDARKAAVRA 100
Query: 1253 WGLQPLPVADPDVFDIMEKEKQRQVRGIELIASENFVCRAVLDALGSHLTNKYSEGMPGS 1074
WG QPL +ADPDV +IMEKEK+RQ RGIELIASENFVCRAV++ALGSHLTNKYSEGMPG+
Sbjct: 101 WGCQPLSIADPDVHEIMEKEKKRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGMPGA 160
Query: 1073 RYYGGNEYIDQIERLCHDRALAAFDLDPESWGVNVQPYSCTSANFAVFTGLLLPKDRIMG 894
RYYGGN+YID+IE LC +RAL AF LDP+ WGVNVQPYSCTSANFAV+TGLLLP DRIMG
Sbjct: 161 RYYGGNQYIDEIETLCCERALNAFGLDPKCWGVNVQPYSCTSANFAVYTGLLLPGDRIMG 220
Query: 893 LDSPSGGHVSHGYYTPSGKKISAASIFFENLSYKVNPMTGYIDYDKLEERAVDFHPKILI 714
LD+PSGG+ SHGYYTP+GKK+S ASIFFE+L YKVNP TGYIDYDKLEERA+DF PKILI
Sbjct: 221 LDTPSGGNTSHGYYTPNGKKVSGASIFFESLPYKVNPQTGYIDYDKLEERALDFRPKILI 280
Query: 713 CGGSSYPREWDYARLRHVADKCGAVLMCDMAHISGLVAAKECLSPFDYCDIVTSTTHKSL 534
CGGSSYPREWDYAR RH+ADKCGAVL+CDMA ISG++AAKEC++PFDYCDIVTSTTHKSL
Sbjct: 281 CGGSSYPREWDYARFRHIADKCGAVLLCDMAQISGIIAAKECVNPFDYCDIVTSTTHKSL 340
Query: 533 RGPRGGIIXXXXXXXXXXXXFSLYQTDESDSYDFEERINFAVFPSLQGGPHNNHIAALAI 354
RGPRGGII L Q ESD YDFEE+INFAVFPS+QGGPHNNHIAALAI
Sbjct: 341 RGPRGGIIFYRKGTKPRKRGILLSQGHESDQYDFEEKINFAVFPSMQGGPHNNHIAALAI 400
Query: 353 ALKQVATPEYKAYIQQVKKNAQALASALLRRKCKLVTGGTDNHXXXXXXXXXXXXXRNFE 174
ALKQVATPEYKAY+QQVKKNAQALA ALLRRKC+LVTGGTDNH + +E
Sbjct: 401 ALKQVATPEYKAYMQQVKKNAQALACALLRRKCRLVTGGTDNHLILWDLRPLGLTGKFYE 460
Query: 173 KVCEACHITLNKTPIFGENGAISPGGIRIGTPAMTTRGCLEGDFESIADFLLRAVQI 3
KVCE CHITLNK IFG+NG I PGG+R+GTPAMT+RGCLE FE++A+FL+RA QI
Sbjct: 461 KVCETCHITLNKIAIFGDNGTIIPGGVRVGTPAMTSRGCLEAHFETMAEFLIRAAQI 517
>ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1-like [Vitis vinifera]
Length = 577
Score = 732 bits (1889), Expect = 0.0
Identities = 374/543 (68%), Positives = 426/543 (78%), Gaps = 6/543 (1%)
Frame = -3
Query: 1613 MDLSHHQSNLSLGFSSHRA-PASEDSISPGVDPCSRA-----PSVPLQLLDQQSENQRDG 1452
MDL+ SNLSLGFSS + ++DSI+ +D R P+ PLQLL++ + G
Sbjct: 1 MDLNS-SSNLSLGFSSSSSVQIADDSIAFQIDSSFRESTNPMPTAPLQLLEENHRGENGG 59
Query: 1451 PARXXXXXXXXXXXXXXEFRILGYSMCIKRQRRGEXXXXXXXXXXXXSKRAKSEPDLETR 1272
EFRILG+SMC+KR+R GE +R E +LE R
Sbjct: 60 GG----GESADEEEKVEEFRILGHSMCLKRRRDGEVTCSAV-------RRDPMEAELEAR 108
Query: 1271 RASVRSWGLQPLPVADPDVFDIMEKEKQRQVRGIELIASENFVCRAVLDALGSHLTNKYS 1092
R++VR+WG Q L VADPDVFDIMEKEK+RQ +GIELIASENFVCRAV++ALGSHLTNKYS
Sbjct: 109 RSAVRAWGNQRLCVADPDVFDIMEKEKRRQFKGIELIASENFVCRAVMEALGSHLTNKYS 168
Query: 1091 EGMPGSRYYGGNEYIDQIERLCHDRALAAFDLDPESWGVNVQPYSCTSANFAVFTGLLLP 912
EGMPG+RYY GN+YID+IE LC RAL AFDLDPE+WGVNVQPYSCTSANFAV+TGLLLP
Sbjct: 169 EGMPGARYYCGNQYIDEIEWLCCKRALKAFDLDPENWGVNVQPYSCTSANFAVYTGLLLP 228
Query: 911 KDRIMGLDSPSGGHVSHGYYTPSGKKISAASIFFENLSYKVNPMTGYIDYDKLEERAVDF 732
DRIMGLD+PSGG+ SHGYYTP+G+K+S ASIFFE+L YKVNP TGYID+DKLEERA+DF
Sbjct: 229 GDRIMGLDTPSGGNTSHGYYTPNGRKVSGASIFFESLPYKVNPQTGYIDFDKLEERALDF 288
Query: 731 HPKILICGGSSYPREWDYARLRHVADKCGAVLMCDMAHISGLVAAKECLSPFDYCDIVTS 552
PKILICGGSSYPREWDYAR R +ADKCGAVL+CDMA ISGLVAAKEC++PFDYCDIVTS
Sbjct: 289 RPKILICGGSSYPREWDYARFRQIADKCGAVLLCDMAQISGLVAAKECVNPFDYCDIVTS 348
Query: 551 TTHKSLRGPRGGIIXXXXXXXXXXXXFSLYQTDESDSYDFEERINFAVFPSLQGGPHNNH 372
TTHKSLRGPRGGII L Q D++D YD+EE+INFAVFPSLQGGPHNNH
Sbjct: 349 TTHKSLRGPRGGIIFYRKGTKPRKRGMILSQGDDNDHYDYEEKINFAVFPSLQGGPHNNH 408
Query: 371 IAALAIALKQVATPEYKAYIQQVKKNAQALASALLRRKCKLVTGGTDNHXXXXXXXXXXX 192
IAALAIALKQVATPEYKAY+ QVKKNAQALASALLRRKC+LVTGGTDNH
Sbjct: 409 IAALAIALKQVATPEYKAYMLQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLRTLGL 468
Query: 191 XXRNFEKVCEACHITLNKTPIFGENGAISPGGIRIGTPAMTTRGCLEGDFESIADFLLRA 12
+N+EKVCE CHITLNK IFG+NG I+PGG+RIGTPAMT+RGCLE DFE+IADFLLRA
Sbjct: 469 TGKNYEKVCEMCHITLNKIAIFGDNGTITPGGVRIGTPAMTSRGCLEADFETIADFLLRA 528
Query: 11 VQI 3
QI
Sbjct: 529 AQI 531
>ref|XP_002285823.1| PREDICTED: serine hydroxymethyltransferase 1-like [Vitis vinifera]
Length = 584
Score = 723 bits (1867), Expect = 0.0
Identities = 373/547 (68%), Positives = 416/547 (76%), Gaps = 10/547 (1%)
Frame = -3
Query: 1613 MDLSHHQSNLSLGFSSHRA-----PASEDSISPGVDPCSRA-----PSVPLQLLDQQSEN 1464
MD SH QS LSLGF SH + P ++DS+ + + SVPLQL +Q+ E
Sbjct: 1 MDASHAQSGLSLGFHSHSSLAPMTPLADDSVKLQIASDFSSLGNPIQSVPLQLFEQRCEK 60
Query: 1463 QRDGPARXXXXXXXXXXXXXXEFRILGYSMCIKRQRRGEXXXXXXXXXXXXSKRAKSEPD 1284
+G EF ILG+ MC+KR R + K A E
Sbjct: 61 FSNGSG------GQSEDGEDEEFHILGHPMCLKRPRDEQFSRSSSPS-----KVALVESG 109
Query: 1283 LETRRASVRSWGLQPLPVADPDVFDIMEKEKQRQVRGIELIASENFVCRAVLDALGSHLT 1104
LE RR +VR+WG QPL VADPDVF IMEKEK+RQ +GIELIASENFVCRAV++ALGSHLT
Sbjct: 110 LEQRRVAVRAWGNQPLSVADPDVFQIMEKEKKRQFKGIELIASENFVCRAVMEALGSHLT 169
Query: 1103 NKYSEGMPGSRYYGGNEYIDQIERLCHDRALAAFDLDPESWGVNVQPYSCTSANFAVFTG 924
NKYSEGMPG+RYY GN+YIDQIE LC RALAAF LD E WGVNVQPYSCTSANFAV+TG
Sbjct: 170 NKYSEGMPGARYYTGNDYIDQIELLCCRRALAAFHLDSEKWGVNVQPYSCTSANFAVYTG 229
Query: 923 LLLPKDRIMGLDSPSGGHVSHGYYTPSGKKISAASIFFENLSYKVNPMTGYIDYDKLEER 744
LLLPKDRIMGLDSPSGGH+SHGYY PSGKK+S SIFFE+L YKVNP TGYIDYDKLEE+
Sbjct: 230 LLLPKDRIMGLDSPSGGHLSHGYYMPSGKKVSGTSIFFESLPYKVNPQTGYIDYDKLEEK 289
Query: 743 AVDFHPKILICGGSSYPREWDYARLRHVADKCGAVLMCDMAHISGLVAAKECLSPFDYCD 564
A+DF PKILICGGSSYPREW+YAR R +ADKCGAVLMCDMA ISG+VAAKEC SPFDYCD
Sbjct: 290 ALDFRPKILICGGSSYPREWNYARFRQIADKCGAVLMCDMAQISGIVAAKECASPFDYCD 349
Query: 563 IVTSTTHKSLRGPRGGIIXXXXXXXXXXXXFSLYQTDESDSYDFEERINFAVFPSLQGGP 384
IVTSTTHK+LRGPRGGII L Q D+S+ YDFEERINFAVFPSLQGGP
Sbjct: 350 IVTSTTHKNLRGPRGGIIFYRKGAKARKPGMLLSQGDDSNQYDFEERINFAVFPSLQGGP 409
Query: 383 HNNHIAALAIALKQVATPEYKAYIQQVKKNAQALASALLRRKCKLVTGGTDNHXXXXXXX 204
HNNHIAALAIALKQVATPEYKAY+QQVKKNAQALA+ALLR+ CKLVT GTDNH
Sbjct: 410 HNNHIAALAIALKQVATPEYKAYMQQVKKNAQALAAALLRKSCKLVTEGTDNHLLLWDLT 469
Query: 203 XXXXXXRNFEKVCEACHITLNKTPIFGENGAISPGGIRIGTPAMTTRGCLEGDFESIADF 24
+N+EKVCE CHITLNKT I+G+NGAISPGG+RIG+PAMTTRGCLE DFE+IA+F
Sbjct: 470 DLHITGKNYEKVCELCHITLNKTAIYGDNGAISPGGVRIGSPAMTTRGCLEADFETIAEF 529
Query: 23 LLRAVQI 3
L RA I
Sbjct: 530 LYRAAVI 536