BLASTX nr result

ID: Dioscorea21_contig00003146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003146
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA96072.1| ribosomal protein L29 [Panax ginseng]                  77   1e-12
gb|AFK48186.1| unknown [Lotus japonicus]                               77   1e-12
ref|XP_003546330.1| PREDICTED: 60S ribosomal protein L29-1 [Glyc...    77   1e-12
ref|XP_003529537.1| PREDICTED: 60S ribosomal protein L29-1-like ...    77   1e-12
ref|XP_003609753.1| 60S ribosomal protein L29 [Medicago truncatu...    77   1e-12

>dbj|BAA96072.1| ribosomal protein L29 [Panax ginseng]
          Length = 61

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 32/35 (91%), Positives = 35/35 (100%)
 Frame = +1

Query: 1   HKNGIKKPRRHRHTSTKGMDPKFLRNQRYARKHNN 105
           H+NGIKKPR+HRHTST+GMDPKFLRNQRYARKHNN
Sbjct: 17  HRNGIKKPRKHRHTSTRGMDPKFLRNQRYARKHNN 51


>gb|AFK48186.1| unknown [Lotus japonicus]
          Length = 61

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +1

Query: 1   HKNGIKKPRRHRHTSTKGMDPKFLRNQRYARKHN 102
           HKNGIKKP+RHRHTSTKGMDPKFLRNQRYARKHN
Sbjct: 17  HKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHN 50


>ref|XP_003546330.1| PREDICTED: 60S ribosomal protein L29-1 [Glycine max]
          Length = 61

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +1

Query: 1   HKNGIKKPRRHRHTSTKGMDPKFLRNQRYARKHN 102
           HKNGIKKP+RHRHTSTKGMDPKFLRNQRYARKHN
Sbjct: 17  HKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHN 50


>ref|XP_003529537.1| PREDICTED: 60S ribosomal protein L29-1-like [Glycine max]
           gi|356529227|ref|XP_003533197.1| PREDICTED: 60S
           ribosomal protein L29-1-like [Glycine max]
           gi|356564681|ref|XP_003550578.1| PREDICTED: 60S
           ribosomal protein L29-1-like [Glycine max]
          Length = 61

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +1

Query: 1   HKNGIKKPRRHRHTSTKGMDPKFLRNQRYARKHN 102
           HKNGIKKP+RHRHTSTKGMDPKFLRNQRYARKHN
Sbjct: 17  HKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHN 50


>ref|XP_003609753.1| 60S ribosomal protein L29 [Medicago truncatula]
           gi|355510808|gb|AES91950.1| 60S ribosomal protein L29
           [Medicago truncatula]
          Length = 445

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +1

Query: 1   HKNGIKKPRRHRHTSTKGMDPKFLRNQRYARKHN 102
           HKNGIKKP+RHRHTSTKGMDPKFLRNQRYARKHN
Sbjct: 153 HKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHN 186



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +1

Query: 1   HKNGIKKPRRHRHTSTKGMDPKFLRNQRYARKHN 102
           HKNGIKKP+RHRHTSTKGMDPKFLRNQRYARKHN
Sbjct: 401 HKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHN 434


Top