BLASTX nr result

ID: Dioscorea21_contig00003145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003145
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609753.1| 60S ribosomal protein L29 [Medicago truncatu...   112   4e-23
gb|AFK48186.1| unknown [Lotus japonicus]                              111   5e-23
ref|XP_003546330.1| PREDICTED: 60S ribosomal protein L29-1 [Glyc...   111   5e-23
ref|XP_003529537.1| PREDICTED: 60S ribosomal protein L29-1-like ...   111   5e-23
gb|AFK45608.1| unknown [Medicago truncatula]                          111   5e-23

>ref|XP_003609753.1| 60S ribosomal protein L29 [Medicago truncatula]
           gi|355510808|gb|AES91950.1| 60S ribosomal protein L29
           [Medicago truncatula]
          Length = 445

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/70 (75%), Positives = 55/70 (78%)
 Frame = +2

Query: 20  SLCAGPPKLRLLRPSRSGMAKSKNHTAHNQSYKAHKNGIKKPRRHRHTSTKGMDPKFLRN 199
           S C+          S   MAKSKNHTAHNQSYKAHKNGIKKP+RHRHTSTKGMDPKFLRN
Sbjct: 119 SSCSAQKNPSSTASSELEMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRN 178

Query: 200 QRYARKHNNK 229
           QRYARKHN K
Sbjct: 179 QRYARKHNKK 188



 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/52 (96%), Positives = 51/52 (98%)
 Frame = +2

Query: 74  MAKSKNHTAHNQSYKAHKNGIKKPRRHRHTSTKGMDPKFLRNQRYARKHNNK 229
           MAKSKNHTAHNQSYKAHKNGIKKP+RHRHTSTKGMDPKFLRNQRYARKHN K
Sbjct: 385 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKK 436


>gb|AFK48186.1| unknown [Lotus japonicus]
          Length = 61

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/52 (96%), Positives = 51/52 (98%)
 Frame = +2

Query: 74  MAKSKNHTAHNQSYKAHKNGIKKPRRHRHTSTKGMDPKFLRNQRYARKHNNK 229
           MAKSKNHTAHNQSYKAHKNGIKKP+RHRHTSTKGMDPKFLRNQRYARKHN K
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKK 52


>ref|XP_003546330.1| PREDICTED: 60S ribosomal protein L29-1 [Glycine max]
          Length = 61

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/52 (96%), Positives = 51/52 (98%)
 Frame = +2

Query: 74  MAKSKNHTAHNQSYKAHKNGIKKPRRHRHTSTKGMDPKFLRNQRYARKHNNK 229
           MAKSKNHTAHNQSYKAHKNGIKKP+RHRHTSTKGMDPKFLRNQRYARKHN K
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKK 52


>ref|XP_003529537.1| PREDICTED: 60S ribosomal protein L29-1-like [Glycine max]
           gi|356529227|ref|XP_003533197.1| PREDICTED: 60S
           ribosomal protein L29-1-like [Glycine max]
           gi|356564681|ref|XP_003550578.1| PREDICTED: 60S
           ribosomal protein L29-1-like [Glycine max]
          Length = 61

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/52 (96%), Positives = 51/52 (98%)
 Frame = +2

Query: 74  MAKSKNHTAHNQSYKAHKNGIKKPRRHRHTSTKGMDPKFLRNQRYARKHNNK 229
           MAKSKNHTAHNQSYKAHKNGIKKP+RHRHTSTKGMDPKFLRNQRYARKHN K
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKK 52


>gb|AFK45608.1| unknown [Medicago truncatula]
          Length = 61

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/52 (96%), Positives = 51/52 (98%)
 Frame = +2

Query: 74  MAKSKNHTAHNQSYKAHKNGIKKPRRHRHTSTKGMDPKFLRNQRYARKHNNK 229
           MAKSKNHTAHNQSYKAHKNGIKKP+RHRHTSTKGMDPKFLRNQRYARKHN K
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKK 52


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