BLASTX nr result
ID: Dioscorea21_contig00003134
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00003134 (261 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI28414.3| unnamed protein product [Vitis vinifera] 127 1e-27 ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin... 127 1e-27 ref|XP_002529054.1| RNA binding protein, putative [Ricinus commu... 126 2e-27 ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2... 126 2e-27 ref|XP_002302838.1| predicted protein [Populus trichocarpa] gi|2... 125 5e-27 >emb|CBI28414.3| unnamed protein product [Vitis vinifera] Length = 525 Score = 127 bits (319), Expect = 1e-27 Identities = 62/86 (72%), Positives = 70/86 (81%) Frame = +3 Query: 3 LARLKNSICLIDRPHGQHSVVLVEDAPKYADYRNDRIDFLQVAASSCQIYLTFPADSTFT 182 LARLKNSI LIDRPHGQHSV+L ED PKY + +R D + SS QIYLTFPADSTFT Sbjct: 255 LARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPGAIVGSSKQIYLTFPADSTFT 314 Query: 183 EEDVMNYFNEFGPVRDVRIPRQEKRM 260 E+DV NYFN+FGPV+DVRIP Q+KRM Sbjct: 315 EQDVSNYFNKFGPVQDVRIPCQQKRM 340 >ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like [Vitis vinifera] Length = 572 Score = 127 bits (319), Expect = 1e-27 Identities = 62/86 (72%), Positives = 70/86 (81%) Frame = +3 Query: 3 LARLKNSICLIDRPHGQHSVVLVEDAPKYADYRNDRIDFLQVAASSCQIYLTFPADSTFT 182 LARLKNSI LIDRPHGQHSV+L ED PKY + +R D + SS QIYLTFPADSTFT Sbjct: 302 LARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPGAIVGSSKQIYLTFPADSTFT 361 Query: 183 EEDVMNYFNEFGPVRDVRIPRQEKRM 260 E+DV NYFN+FGPV+DVRIP Q+KRM Sbjct: 362 EQDVSNYFNKFGPVQDVRIPCQQKRM 387 >ref|XP_002529054.1| RNA binding protein, putative [Ricinus communis] gi|223531534|gb|EEF33365.1| RNA binding protein, putative [Ricinus communis] Length = 551 Score = 126 bits (316), Expect = 2e-27 Identities = 61/86 (70%), Positives = 70/86 (81%) Frame = +3 Query: 3 LARLKNSICLIDRPHGQHSVVLVEDAPKYADYRNDRIDFLQVAASSCQIYLTFPADSTFT 182 LARLKNSI LIDRPHGQH+V+L ED PKY + R DR D + + S QIYLTFPA+STFT Sbjct: 296 LARLKNSIRLIDRPHGQHAVILAEDVPKYMENRGDRNDPGPIVSGSRQIYLTFPAESTFT 355 Query: 183 EEDVMNYFNEFGPVRDVRIPRQEKRM 260 E+DV NYFN+FGPV DVRIP Q+KRM Sbjct: 356 EDDVSNYFNKFGPVEDVRIPCQQKRM 381 >ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1| predicted protein [Populus trichocarpa] Length = 554 Score = 126 bits (316), Expect = 2e-27 Identities = 61/86 (70%), Positives = 71/86 (82%) Frame = +3 Query: 3 LARLKNSICLIDRPHGQHSVVLVEDAPKYADYRNDRIDFLQVAASSCQIYLTFPADSTFT 182 LARLKNSI LIDRPHGQHSV+L ED PKY +Y +R D + A S QIYLTFPA+STFT Sbjct: 280 LARLKNSIRLIDRPHGQHSVILTEDVPKYLEYAGERNDPGGIVAGSRQIYLTFPAESTFT 339 Query: 183 EEDVMNYFNEFGPVRDVRIPRQEKRM 260 E+DV NYF++FGPV+DVRIP Q+KRM Sbjct: 340 EQDVSNYFSKFGPVQDVRIPCQQKRM 365 >ref|XP_002302838.1| predicted protein [Populus trichocarpa] gi|222844564|gb|EEE82111.1| predicted protein [Populus trichocarpa] Length = 391 Score = 125 bits (313), Expect = 5e-27 Identities = 61/86 (70%), Positives = 70/86 (81%) Frame = +3 Query: 3 LARLKNSICLIDRPHGQHSVVLVEDAPKYADYRNDRIDFLQVAASSCQIYLTFPADSTFT 182 LARLKNSI LIDRPHGQHSV+L ED PKY +Y +R D + A S QIYLTFPA+STFT Sbjct: 263 LARLKNSIRLIDRPHGQHSVILAEDFPKYLEYAGERNDPGGIVAGSRQIYLTFPAESTFT 322 Query: 183 EEDVMNYFNEFGPVRDVRIPRQEKRM 260 E+DV NYF+ FGPV+DVRIP Q+KRM Sbjct: 323 EQDVSNYFSNFGPVQDVRIPCQQKRM 348