BLASTX nr result

ID: Dioscorea21_contig00003128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003128
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145505.1| PREDICTED: transcription initiation factor T...   143   2e-32
dbj|BAC79801.1| putative TATA box binding protein-associated fac...   139   4e-31
ref|NP_001059147.2| Os07g0205200 [Oryza sativa Japonica Group] g...   139   4e-31
gb|EEC81710.1| hypothetical protein OsI_25319 [Oryza sativa Indi...   139   4e-31
ref|NP_001183382.1| uncharacterized protein LOC100501797 [Zea ma...   137   1e-30

>ref|XP_004145505.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           [Cucumis sativus] gi|449485181|ref|XP_004157092.1|
           PREDICTED: transcription initiation factor TFIID subunit
           5-like [Cucumis sativus]
          Length = 674

 Score =  143 bits (361), Expect = 2e-32
 Identities = 69/87 (79%), Positives = 79/87 (90%)
 Frame = +2

Query: 2   TGRCVSPLMGHSSCVWTLAFSCEGTVLSSGSADNTVKLWDVTASMKPLRIDDNKTGGPIN 181
           TGRCV+PL+GH+SCVWTLAFSCEG++L+SGSAD TVKLWDVT+S KP R D+NKTG P N
Sbjct: 577 TGRCVTPLIGHTSCVWTLAFSCEGSLLASGSADCTVKLWDVTSSTKPPRTDENKTGTP-N 635

Query: 182 RLRLLKVLPTKSTPVYTLQFSRRNLLF 262
           RLR LK LPTKSTPVY+L+FSRRNLLF
Sbjct: 636 RLRSLKTLPTKSTPVYSLRFSRRNLLF 662


>dbj|BAC79801.1| putative TATA box binding protein-associated factor [Oryza sativa
           Japonica Group]
          Length = 563

 Score =  139 bits (349), Expect = 4e-31
 Identities = 66/87 (75%), Positives = 77/87 (88%)
 Frame = +2

Query: 2   TGRCVSPLMGHSSCVWTLAFSCEGTVLSSGSADNTVKLWDVTASMKPLRIDDNKTGGPIN 181
           +GRCVSPL+GH+SCVW+LA+SCEG +L+SGSAD TVKLWDV +S K L++DD K GG  N
Sbjct: 469 SGRCVSPLVGHNSCVWSLAYSCEGALLASGSADCTVKLWDVASSTKTLKMDDTK-GGSAN 527

Query: 182 RLRLLKVLPTKSTPVYTLQFSRRNLLF 262
           RLR+LK LPTKSTPVYTLQFSRRNLLF
Sbjct: 528 RLRMLKALPTKSTPVYTLQFSRRNLLF 554


>ref|NP_001059147.2| Os07g0205200 [Oryza sativa Japonica Group]
           gi|255677596|dbj|BAF21061.2| Os07g0205200, partial
           [Oryza sativa Japonica Group]
          Length = 296

 Score =  139 bits (349), Expect = 4e-31
 Identities = 66/87 (75%), Positives = 77/87 (88%)
 Frame = +2

Query: 2   TGRCVSPLMGHSSCVWTLAFSCEGTVLSSGSADNTVKLWDVTASMKPLRIDDNKTGGPIN 181
           +GRCVSPL+GH+SCVW+LA+SCEG +L+SGSAD TVKLWDV +S K L++DD K GG  N
Sbjct: 202 SGRCVSPLVGHNSCVWSLAYSCEGALLASGSADCTVKLWDVASSTKTLKMDDTK-GGSAN 260

Query: 182 RLRLLKVLPTKSTPVYTLQFSRRNLLF 262
           RLR+LK LPTKSTPVYTLQFSRRNLLF
Sbjct: 261 RLRMLKALPTKSTPVYTLQFSRRNLLF 287


>gb|EEC81710.1| hypothetical protein OsI_25319 [Oryza sativa Indica Group]
           gi|222636641|gb|EEE66773.1| hypothetical protein
           OsJ_23498 [Oryza sativa Japonica Group]
          Length = 631

 Score =  139 bits (349), Expect = 4e-31
 Identities = 66/87 (75%), Positives = 77/87 (88%)
 Frame = +2

Query: 2   TGRCVSPLMGHSSCVWTLAFSCEGTVLSSGSADNTVKLWDVTASMKPLRIDDNKTGGPIN 181
           +GRCVSPL+GH+SCVW+LA+SCEG +L+SGSAD TVKLWDV +S K L++DD K GG  N
Sbjct: 537 SGRCVSPLVGHNSCVWSLAYSCEGALLASGSADCTVKLWDVASSTKTLKMDDTK-GGSAN 595

Query: 182 RLRLLKVLPTKSTPVYTLQFSRRNLLF 262
           RLR+LK LPTKSTPVYTLQFSRRNLLF
Sbjct: 596 RLRMLKALPTKSTPVYTLQFSRRNLLF 622


>ref|NP_001183382.1| uncharacterized protein LOC100501797 [Zea mays]
           gi|238011146|gb|ACR36608.1| unknown [Zea mays]
          Length = 657

 Score =  137 bits (346), Expect = 1e-30
 Identities = 67/87 (77%), Positives = 75/87 (86%)
 Frame = +2

Query: 2   TGRCVSPLMGHSSCVWTLAFSCEGTVLSSGSADNTVKLWDVTASMKPLRIDDNKTGGPIN 181
           TGRCVSPL+GHSSCVWTLAFSCEG +L+SGSAD TVKLWDV +S K L+ +D K G   N
Sbjct: 562 TGRCVSPLLGHSSCVWTLAFSCEGALLASGSADCTVKLWDVASSTKTLKTEDTK-GSSAN 620

Query: 182 RLRLLKVLPTKSTPVYTLQFSRRNLLF 262
           RLRLLK LPTKSTPVY+L+FSRRNLLF
Sbjct: 621 RLRLLKALPTKSTPVYSLRFSRRNLLF 647


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