BLASTX nr result

ID: Dioscorea21_contig00003121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003121
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001065060.1| Os10g0516100 [Oryza sativa Japonica Group] g...   155   2e-36
ref|XP_003574175.1| PREDICTED: glycine cleavage system H protein...   155   4e-36
ref|XP_002519845.1| glycine cleavage system h protein, putative ...   155   4e-36
ref|XP_004148493.1| PREDICTED: glycine cleavage system H protein...   152   4e-35
emb|CAJ13723.1| H-protein of the glycine decarboxylase multi-enz...   152   4e-35

>ref|NP_001065060.1| Os10g0516100 [Oryza sativa Japonica Group]
           gi|152032493|sp|A2Z9B8.1|GCSH_ORYSI RecName:
           Full=Glycine cleavage system H protein, mitochondrial;
           Flags: Precursor gi|152032494|sp|A3C6G9.1|GCSH_ORYSJ
           RecName: Full=Glycine cleavage system H protein,
           mitochondrial; Flags: Precursor
           gi|13786469|gb|AAK39594.1|AC025296_29 putative glycine
           decarboxylase subunit [Oryza sativa Japonica Group]
           gi|31433058|gb|AAP54618.1| Glycine cleavage system H
           protein, mitochondrial precursor, putative, expressed
           [Oryza sativa Japonica Group]
           gi|113639669|dbj|BAF26974.1| Os10g0516100 [Oryza sativa
           Japonica Group] gi|125532637|gb|EAY79202.1| hypothetical
           protein OsI_34315 [Oryza sativa Indica Group]
           gi|125575398|gb|EAZ16682.1| hypothetical protein
           OsJ_32157 [Oryza sativa Japonica Group]
           gi|215693048|dbj|BAG88468.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740831|dbj|BAG96987.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215767804|dbj|BAH00033.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 164

 Score =  155 bits (393), Expect = 2e-36
 Identities = 78/103 (75%), Positives = 92/103 (89%), Gaps = 4/103 (3%)
 Frame = -1

Query: 299 LWASSAANVLKISCNGAR--APTFF--RCFSSVLDGLKYSPSHEWVKHEGSVATVGITDH 132
           LWASSAAN LKISC+GA   AP +   R FS+VLDGLKYS SHEWVK++GSVAT+GITDH
Sbjct: 5   LWASSAANALKISCSGATRAAPAYSISRYFSTVLDGLKYSSSHEWVKNDGSVATIGITDH 64

Query: 131 AQGHLGDVVFVDLPESGSKVTKGGSFGAVESVKATSDVNSPIS 3
           AQGHLG+VVFV+LPE+G+KV++GG+FG VESVKATSD+NSPIS
Sbjct: 65  AQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPIS 107


>ref|XP_003574175.1| PREDICTED: glycine cleavage system H protein, mitochondrial-like
           [Brachypodium distachyon]
          Length = 164

 Score =  155 bits (391), Expect = 4e-36
 Identities = 78/103 (75%), Positives = 91/103 (88%), Gaps = 4/103 (3%)
 Frame = -1

Query: 299 LWASSAANVLKISCNGARAP----TFFRCFSSVLDGLKYSPSHEWVKHEGSVATVGITDH 132
           LWASSAAN LKIS +GARA     +  R FS+VLDGLKYS SHEWVK+EG+VAT+GI+DH
Sbjct: 5   LWASSAANALKISSSGARAAAPAYSISRYFSTVLDGLKYSSSHEWVKNEGTVATIGISDH 64

Query: 131 AQGHLGDVVFVDLPESGSKVTKGGSFGAVESVKATSDVNSPIS 3
           AQGHLG+VVFV+LPE+G+KVT+GG+FG VESVKATSDVNSPIS
Sbjct: 65  AQGHLGEVVFVELPEAGTKVTQGGAFGNVESVKATSDVNSPIS 107


>ref|XP_002519845.1| glycine cleavage system h protein, putative [Ricinus communis]
           gi|223540891|gb|EEF42449.1| glycine cleavage system h
           protein, putative [Ricinus communis]
          Length = 165

 Score =  155 bits (391), Expect = 4e-36
 Identities = 78/103 (75%), Positives = 88/103 (85%), Gaps = 4/103 (3%)
 Frame = -1

Query: 299 LWASSAANVLKIS--CNGARAPTFF--RCFSSVLDGLKYSPSHEWVKHEGSVATVGITDH 132
           +WASS AN LKIS  C    +P++   RCFSSVLDGLKY+ SHEWVKHEGSVAT+GITDH
Sbjct: 5   MWASSTANTLKISVACKAQLSPSYSLSRCFSSVLDGLKYATSHEWVKHEGSVATIGITDH 64

Query: 131 AQGHLGDVVFVDLPESGSKVTKGGSFGAVESVKATSDVNSPIS 3
           AQ HLG+VVFVDLPE+G+ VT+G SFGAVESVKATSDVNSPIS
Sbjct: 65  AQDHLGEVVFVDLPEAGTSVTQGKSFGAVESVKATSDVNSPIS 107


>ref|XP_004148493.1| PREDICTED: glycine cleavage system H protein, mitochondrial-like
           [Cucumis sativus] gi|449513621|ref|XP_004164375.1|
           PREDICTED: glycine cleavage system H protein,
           mitochondrial-like [Cucumis sativus]
          Length = 165

 Score =  152 bits (383), Expect = 4e-35
 Identities = 77/103 (74%), Positives = 88/103 (85%), Gaps = 4/103 (3%)
 Frame = -1

Query: 299 LWASSAANVLKISCNGAR--APTFF--RCFSSVLDGLKYSPSHEWVKHEGSVATVGITDH 132
           +WASS AN LK+S +     +P+F   RCFS+VLDGLKY+ SHEWVKHEGSVATVGITDH
Sbjct: 5   MWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVGITDH 64

Query: 131 AQGHLGDVVFVDLPESGSKVTKGGSFGAVESVKATSDVNSPIS 3
           AQ HLG+VVFVDLPESGS V++G SFGAVESVKATSD+NSPIS
Sbjct: 65  AQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPIS 107


>emb|CAJ13723.1| H-protein of the glycine decarboxylase multi-enzyme complex [Pisum
           sativum var. pumilio]
          Length = 165

 Score =  152 bits (383), Expect = 4e-35
 Identities = 77/103 (74%), Positives = 86/103 (83%), Gaps = 4/103 (3%)
 Frame = -1

Query: 299 LWASSAANVLKISCNGAR--APTFF--RCFSSVLDGLKYSPSHEWVKHEGSVATVGITDH 132
           +WASS AN LK+S +     +PTF   RCFS+VLDGLKY+PSHEWVKHEGSVAT+GITDH
Sbjct: 5   MWASSTANALKLSSSSRLHLSPTFSISRCFSNVLDGLKYAPSHEWVKHEGSVATIGITDH 64

Query: 131 AQGHLGDVVFVDLPESGSKVTKGGSFGAVESVKATSDVNSPIS 3
           AQ HLG+VVFV+LPE G  VTKG  FGAVESVKATSDVNSPIS
Sbjct: 65  AQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPIS 107


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