BLASTX nr result

ID: Dioscorea21_contig00003113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003113
         (1200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281644.1| PREDICTED: uncharacterized protein LOC100252...   214   5e-53
emb|CAN65462.1| hypothetical protein VITISV_002198 [Vitis vinifera]   211   4e-52
ref|XP_002527549.1| conserved hypothetical protein [Ricinus comm...   198   2e-48
ref|XP_002315841.1| predicted protein [Populus trichocarpa] gi|2...   196   7e-48
gb|ABK95394.1| unknown [Populus trichocarpa]                          189   2e-45

>ref|XP_002281644.1| PREDICTED: uncharacterized protein LOC100252594 [Vitis vinifera]
          Length = 698

 Score =  214 bits (544), Expect = 5e-53
 Identities = 134/295 (45%), Positives = 161/295 (54%), Gaps = 4/295 (1%)
 Frame = +3

Query: 3    PHLWPLWFGRPVCNLFLTECDMVFGKSVRIDSVGDYRGSLKLSLTPGDLLVIQGRSADVA 182
            PH+WP WFGRPVC LFLTECDM FG+ +  D  GDYRGSLKLSL PG LLV+QG+SAD A
Sbjct: 407  PHIWPTWFGRPVCILFLTECDMTFGRVIGADHPGDYRGSLKLSLVPGSLLVMQGKSADFA 466

Query: 183  RHAIPSLRKERILLTFGKHQPMKNAPSEAXXXXXXXXXXXXXXXXXXXRSPGLTRHP-SP 359
            +HAIPSLRK+RIL+TF K QP K   S+                    RSP   RHP  P
Sbjct: 467  KHAIPSLRKQRILVTFTKSQPKKTMASDG-QRLLPPAAQSSHWVPPPSRSPNHMRHPMGP 525

Query: 360  KPYGAAPTTGVLPAPS--IRPQHMPPPNGIQPIFXXXXXXXXXXXTYAAHIPVPSTSSGW 533
            K YGA PTTGVLPAP+  +RPQ +PPPNG+QP+F            + A +P+P+ S GW
Sbjct: 526  KHYGAVPTTGVLPAPAPPMRPQ-LPPPNGMQPLF--VTTAVAPAMPFPAPVPLPTGSPGW 582

Query: 534  TXXXXXXXXXXXXXXXGTGVXXXXXXXXXXXXXXQLPMTPTSNEANCAPEVTENYNGAKK 713
                            GTGV               +    TS     A   TE  NG+ K
Sbjct: 583  -PAAPPRHPPPRLPVPGTGVFLPPPGSGNSSSPQHISTEATSTSVETAAP-TEKENGSGK 640

Query: 714  HSDN-NSAPPRNRLDGTPHKLGSNGNTNDGSSPGGRANGKEEQQCSNARKKVANK 875
             S N N+  P+ +LDG  H+   NG+  D +    RA  KEEQQ  N   KVA+K
Sbjct: 641  SSSNSNTVSPKGKLDGKVHRQECNGSM-DETGVDERAVTKEEQQ-HNDELKVASK 693


>emb|CAN65462.1| hypothetical protein VITISV_002198 [Vitis vinifera]
          Length = 1145

 Score =  211 bits (536), Expect = 4e-52
 Identities = 130/292 (44%), Positives = 159/292 (54%), Gaps = 4/292 (1%)
 Frame = +3

Query: 3    PHLWPLWFGRPVCNLFLTECDMVFGKSVRIDSVGDYRGSLKLSLTPGDLLVIQGRSADVA 182
            PH+WP WFGRPVC LFLTECDM FG+ +  D  GDYRGSLKLSL PG LLV+QG+SAD A
Sbjct: 420  PHIWPTWFGRPVCILFLTECDMTFGRVIGADHPGDYRGSLKLSLVPGSLLVMQGKSADFA 479

Query: 183  RHAIPSLRKERILLTFGKHQPMKNAPSEAXXXXXXXXXXXXXXXXXXXRSPGLTRHP-SP 359
            +HAIPSLRK+RIL+TF K QP K   S+                    RSP   RHP  P
Sbjct: 480  KHAIPSLRKQRILVTFTKSQPKKTTASDG-QRLLPPAAQSSHWVPPPSRSPNHMRHPMGP 538

Query: 360  KPYGAAPTTGVLPAPS--IRPQHMPPPNGIQPIFXXXXXXXXXXXTYAAHIPVPSTSSGW 533
            K YGA PTTGVLPAP+  +RPQ +PPPNG+QP+F            + A  P+P+ S GW
Sbjct: 539  KHYGAVPTTGVLPAPAPPMRPQ-LPPPNGMQPLF--VTTAVAPAMPFPAPXPLPTGSPGW 595

Query: 534  TXXXXXXXXXXXXXXXGTGVXXXXXXXXXXXXXXQLPMTPTSNEANCAPEVTENYNGAKK 713
                            GTGV               +    TS     A   TE  NG+ K
Sbjct: 596  -PAAPPRHPPPRLPVPGTGVFLPPPGSGNSSSPQHISTEATSTSVETAAP-TEKENGSGK 653

Query: 714  HSDN-NSAPPRNRLDGTPHKLGSNGNTNDGSSPGGRANGKEEQQCSNARKKV 866
             S N N+  P+ +LDG  H+   NG+  D +    RA  KEEQQ ++  K++
Sbjct: 654  SSSNSNTVSPKGKLDGKVHRQECNGSM-DETGVDERAVTKEEQQHNDELKEL 704


>ref|XP_002527549.1| conserved hypothetical protein [Ricinus communis]
            gi|223533099|gb|EEF34858.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 697

 Score =  198 bits (504), Expect = 2e-48
 Identities = 114/285 (40%), Positives = 145/285 (50%), Gaps = 3/285 (1%)
 Frame = +3

Query: 3    PHLWPLWFGRPVCNLFLTECDMVFGKSVRIDSVGDYRGSLKLSLTPGDLLVIQGRSADVA 182
            PH+WP WFG+P+  LFLTECD+ FG+ +  D  GDYRGSLKL L PG LLV+QG++ D A
Sbjct: 413  PHMWPPWFGKPISVLFLTECDLTFGRVITADHPGDYRGSLKLPLAPGSLLVMQGKATDFA 472

Query: 183  RHAIPSLRKERILLTFGKHQPMKNAPSEAXXXXXXXXXXXXXXXXXXXRSPGLTRHPSPK 362
            +HAIP++RK+R+LLTF K QP K   S+                    RSP   RHP  K
Sbjct: 473  KHAIPAIRKQRVLLTFTKSQPKKFVQSDGQRLTSPAASPSSHWGPPPSRSPNHIRHPVSK 532

Query: 363  PYGAAPTTGVLPAPSIRPQHMPPPNGIQPIFXXXXXXXXXXXTYAAHIPVPSTSSGWTXX 542
             Y   PTTGVLPAPSIRPQ + PPNG+QP+F            + A +P+P  S+GW   
Sbjct: 533  HYAPIPTTGVLPAPSIRPQ-IAPPNGVQPLF--VTAPVAAPMPFPAPVPMPPVSTGWPAA 589

Query: 543  XXXXXXXXXXXXXGTGVXXXXXXXXXXXXXXQLPMTPTSNEANCAPE---VTENYNGAKK 713
                         GTGV                P  P + E N   E   + +  NG  K
Sbjct: 590  PRHPPNRLPVPVPGTGV----FLPPPGSGNASSPQIPNATEINFPAETASLQDKENGLGK 645

Query: 714  HSDNNSAPPRNRLDGTPHKLGSNGNTNDGSSPGGRANGKEEQQCS 848
             +    A P+ +L+    K   NG T+      G+A  KEE Q S
Sbjct: 646  SNHGTCASPKEKLEAKSQKQDCNGITD------GKAGTKEEHQQS 684


>ref|XP_002315841.1| predicted protein [Populus trichocarpa] gi|222864881|gb|EEF02012.1|
            predicted protein [Populus trichocarpa]
          Length = 699

 Score =  196 bits (499), Expect = 7e-48
 Identities = 117/285 (41%), Positives = 147/285 (51%), Gaps = 2/285 (0%)
 Frame = +3

Query: 3    PHLWPLWFGRPVCNLFLTECDMVFGKSVRIDSVGDYRGSLKLSLTPGDLLVIQGRSADVA 182
            P +WP WFG+PV  LFLTEC++ FG+ +     GDYRGSLKLSL PG LLV+QG+S+DVA
Sbjct: 417  PRMWPPWFGKPVSVLFLTECELTFGREIETVHHGDYRGSLKLSLVPGSLLVMQGKSSDVA 476

Query: 183  RHAIPSLRKERILLTFGKHQPMKNAPSEAXXXXXXXXXXXXXXXXXXXRSPGLTRHPSPK 362
            +HAIP +RK+R+L+TF K QP K + ++                    RSP   RHP PK
Sbjct: 477  KHAIPMIRKQRMLITFTKSQPKKFSSTDGSRLPSHAVAPSSHWGPSLSRSPNHPRHPVPK 536

Query: 363  PYGAAPTTGVLPAPSIRPQHMPPPNGIQPIFXXXXXXXXXXXTYAAHIPVPSTSSGW-TX 539
             Y A PT GVLP P IRPQ +PPPNG+QPIF            + A +P+P  S+GW T 
Sbjct: 537  HYAAIPTAGVLPVPPIRPQ-IPPPNGVQPIF------MTTTVPFPAPVPIPPVSTGWLTA 589

Query: 540  XXXXXXXXXXXXXXGTGVXXXXXXXXXXXXXXQLPMTPTS-NEANCAPEVTENYNGAKKH 716
                          GTGV              QL    T  N       + E  NG  K 
Sbjct: 590  SPRHPSARLPVPIPGTGVFLPPPGSGNASSPLQLSTAATEMNFHTETASLPEKENGLGKS 649

Query: 717  SDNNSAPPRNRLDGTPHKLGSNGNTNDGSSPGGRANGKEEQQCSN 851
            + + SA P+ +L     +L  NG  +      GRA  KEEQQ  N
Sbjct: 650  NCDTSASPKEKLAEKTQRLDCNGILD------GRAVKKEEQQSVN 688


>gb|ABK95394.1| unknown [Populus trichocarpa]
          Length = 694

 Score =  189 bits (479), Expect = 2e-45
 Identities = 114/282 (40%), Positives = 147/282 (52%), Gaps = 2/282 (0%)
 Frame = +3

Query: 3    PHLWPLWFGRPVCNLFLTECDMVFGKSVRIDSVGDYRGSLKLSLTPGDLLVIQGRSADVA 182
            PH+WP WFG+PV  LFLTEC++ FGK +     GDY+GSLKLS+ PG LLV+QG+S+D+A
Sbjct: 410  PHMWPPWFGKPVSVLFLTECELTFGKVIDTLHHGDYKGSLKLSVAPGSLLVMQGKSSDLA 469

Query: 183  RHAIPSLRKERILLTFGKHQPMKNAPSEAXXXXXXXXXXXXXXXXXXXRSPGLTRHPSPK 362
            +HAIP ++K+R+L+TF K QP K   ++                    RSP   RHP PK
Sbjct: 470  KHAIPMIKKQRMLVTFTKSQPKKLTSNDGPRLPSHAVAPSSHWGPPPSRSPNHLRHPVPK 529

Query: 363  PYGAAPTTGVLPAPSIRPQHMPPPNGIQPIFXXXXXXXXXXXTYAAHIPVPSTSSGW-TX 539
             Y A PTTGVL  P IRPQ +PPPNG+QP+F            + A +P+P  S+GW T 
Sbjct: 530  HYAAIPTTGVLLVPPIRPQ-IPPPNGVQPLF--MTTPVAAPMPFPAPVPIPPVSTGWPTS 586

Query: 540  XXXXXXXXXXXXXXGTGVXXXXXXXXXXXXXXQLPMTPTSNEANCAPEV-TENYNGAKKH 716
                          GTGV              QL  T T  E N   E   E  NG  K 
Sbjct: 587  SPRHPSARLPVPIPGTGVFLPPPGSGNASSALQLSATAT--EMNFPTETEKEKENGPGKS 644

Query: 717  SDNNSAPPRNRLDGTPHKLGSNGNTNDGSSPGGRANGKEEQQ 842
            + + SA P+ +      +  SNG+ +      G A  KEEQQ
Sbjct: 645  NHDTSASPKEKSAEKTQRQDSNGDVD------GIAVKKEEQQ 680


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