BLASTX nr result

ID: Dioscorea21_contig00003079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003079
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633157.1| PREDICTED: uncharacterized protein LOC100852...    90   2e-16
emb|CBI25619.3| unnamed protein product [Vitis vinifera]               89   3e-16
dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa...    89   4e-16
ref|XP_003572901.1| PREDICTED: 60S ribosomal protein L39-like [B...    89   4e-16
ref|XP_002523523.1| ribosomal protein L39e, putative [Ricinus co...    89   4e-16

>ref|XP_003633157.1| PREDICTED: uncharacterized protein LOC100852602 [Vitis vinifera]
          Length = 125

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/61 (68%), Positives = 50/61 (81%)
 Frame = +3

Query: 18  ASEQQGSNNAVTQDVHHQEEAGEEDAPEQAHPALDPHAHGQHHQVQREAQALAPHEARVL 197
           ++  +   NAV QD+H QEEAGEED  EQA  +LDP+A+GQHHQVQREAQALAPHEARVL
Sbjct: 58  SASSEDLKNAVAQDLHDQEEAGEEDEAEQADSSLDPYAYGQHHQVQREAQALAPHEARVL 117

Query: 198 R 200
           +
Sbjct: 118 K 118


>emb|CBI25619.3| unnamed protein product [Vitis vinifera]
          Length = 72

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/61 (67%), Positives = 44/61 (72%)
 Frame = +1

Query: 13  LELRSSRAATMPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 192
           L  R+ + + MPSH            MRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG
Sbjct: 12  LRRRARKISKMPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 71

Query: 193 F 195
           F
Sbjct: 72  F 72


>dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa Japonica Group]
          Length = 118

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/54 (75%), Positives = 42/54 (77%)
 Frame = +1

Query: 34  AATMPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 195
           AATMPSH            MRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 65  AATMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 118


>ref|XP_003572901.1| PREDICTED: 60S ribosomal protein L39-like [Brachypodium distachyon]
          Length = 97

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/54 (75%), Positives = 42/54 (77%)
 Frame = +1

Query: 34  AATMPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 195
           AATMPSH            MRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 44  AATMPSHKTFRIKQKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 97


>ref|XP_002523523.1| ribosomal protein L39e, putative [Ricinus communis]
           gi|223537230|gb|EEF38862.1| ribosomal protein L39e,
           putative [Ricinus communis]
          Length = 67

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/59 (69%), Positives = 43/59 (72%)
 Frame = +1

Query: 19  LRSSRAATMPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 195
           L + + A MPSH            MRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 9   LEALQVAKMPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 67


Top