BLASTX nr result

ID: Dioscorea21_contig00003067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003067
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282641.1| PREDICTED: 60S ribosomal protein L10a-1-like...   102   4e-20
gb|ABK22320.1| unknown [Picea sitchensis]                             100   2e-19
gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis]             100   2e-19
ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like...    99   4e-19
emb|CAN67239.1| hypothetical protein VITISV_004804 [Vitis vinifera]    99   4e-19

>ref|XP_002282641.1| PREDICTED: 60S ribosomal protein L10a-1-like [Vitis vinifera]
          Length = 216

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/55 (90%), Positives = 52/55 (94%)
 Frame = -2

Query: 166 MSKLQSDVLREAITQVVGDAKTKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLP 2
           MSKLQS+ LREAITQ+VGDAK KKRNF ETIELQIGLKNYDPQKDKRFSGSVKLP
Sbjct: 1   MSKLQSEALREAITQIVGDAKEKKRNFIETIELQIGLKNYDPQKDKRFSGSVKLP 55


>gb|ABK22320.1| unknown [Picea sitchensis]
          Length = 216

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/55 (89%), Positives = 52/55 (94%)
 Frame = -2

Query: 166 MSKLQSDVLREAITQVVGDAKTKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLP 2
           MSKLQSDVLRE ITQV+G++K KKR FTETIELQIGLKNYDPQKDKRFSGSVKLP
Sbjct: 1   MSKLQSDVLREGITQVMGESKDKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLP 55


>gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis]
          Length = 216

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = -2

Query: 166 MSKLQSDVLREAITQVVGDAKTKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLP 2
           MSKLQSDVLREAI+Q+  D++ KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLP
Sbjct: 1   MSKLQSDVLREAISQITNDSREKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLP 55


>ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like [Vitis vinifera]
          Length = 216

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/55 (87%), Positives = 51/55 (92%)
 Frame = -2

Query: 166 MSKLQSDVLREAITQVVGDAKTKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLP 2
           MSKLQSD LREAIT +V ++K KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLP
Sbjct: 1   MSKLQSDALREAITNIVNESKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLP 55


>emb|CAN67239.1| hypothetical protein VITISV_004804 [Vitis vinifera]
          Length = 920

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/67 (74%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
 Frame = -2

Query: 199 GKEQSFEGF-LTMSKLQSDVLREAITQVVGDAKTKKRNFTETIELQIGLKNYDPQKDKRF 23
           G+  S +G  ++ SKLQSD LREAIT +V ++K KKRNFTETIELQIGLKNYDPQKDKRF
Sbjct: 774 GRGASTQGLRISSSKLQSDALREAITNIVNESKEKKRNFTETIELQIGLKNYDPQKDKRF 833

Query: 22  SGSVKLP 2
           SGSVKLP
Sbjct: 834 SGSVKLP 840


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