BLASTX nr result

ID: Dioscorea21_contig00003054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003054
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320849.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_002302617.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_002280531.1| PREDICTED: uncharacterized protein LOC100261...    89   4e-16
gb|AEW43293.1| hypothetical protein [Hevea brasiliensis]               88   6e-16
ref|XP_002320848.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14

>ref|XP_002320849.1| predicted protein [Populus trichocarpa] gi|222861622|gb|EEE99164.1|
           predicted protein [Populus trichocarpa]
          Length = 79

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 42/68 (61%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
 Frame = +2

Query: 50  METV--PITNISRQDQGHIGKERCGGFQMPLHYPRYTKADYETMPEWKLDCLLSQYGLHF 223
           ME+V  P +NI     G   KERCG FQMPLHYPR+T+A+YETMPEWKLDCLL +YGL  
Sbjct: 1   MESVARPTSNIGDGPNGQHTKERCGSFQMPLHYPRHTRAEYETMPEWKLDCLLREYGLPI 60

Query: 224 SGSLQEKR 247
           +G +++KR
Sbjct: 61  TGDVEQKR 68


>ref|XP_002302617.1| predicted protein [Populus trichocarpa] gi|222844343|gb|EEE81890.1|
           predicted protein [Populus trichocarpa]
          Length = 79

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
 Frame = +2

Query: 50  METV--PITNISRQDQGHIGKERCGGFQMPLHYPRYTKADYETMPEWKLDCLLSQYGLHF 223
           ME+V  P +NI     G   KERCG FQMPLHYPRYT A+Y+TMPEWKLDCLL +YGL  
Sbjct: 1   MESVVRPPSNIGSGPSGQHTKERCGDFQMPLHYPRYTLAEYQTMPEWKLDCLLKEYGLPI 60

Query: 224 SGSLQEKR 247
           +G +++KR
Sbjct: 61  TGDVEQKR 68


>ref|XP_002280531.1| PREDICTED: uncharacterized protein LOC100261908 [Vitis vinifera]
           gi|297745397|emb|CBI40477.3| unnamed protein product
           [Vitis vinifera]
          Length = 80

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 35/49 (71%), Positives = 45/49 (91%)
 Frame = +2

Query: 101 GKERCGGFQMPLHYPRYTKADYETMPEWKLDCLLSQYGLHFSGSLQEKR 247
           G++RCG FQMPLHYPRYT+ADYETMPEWK+DCLL++YGL  +G +++KR
Sbjct: 21  GRDRCGQFQMPLHYPRYTQADYETMPEWKIDCLLAEYGLPVTGGVEQKR 69


>gb|AEW43293.1| hypothetical protein [Hevea brasiliensis]
          Length = 79

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/68 (58%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
 Frame = +2

Query: 50  METV--PITNISRQDQGHIGKERCGGFQMPLHYPRYTKADYETMPEWKLDCLLSQYGLHF 223
           ME+V  P  NI  +      K+RCG FQMPLHYPRYT A+Y+TMPEWKLDCLL +YGL  
Sbjct: 1   MESVARPAENIGGRPNSEHAKDRCGYFQMPLHYPRYTHAEYDTMPEWKLDCLLKEYGLPI 60

Query: 224 SGSLQEKR 247
           +G+++ KR
Sbjct: 61  TGNVEYKR 68


>ref|XP_002320848.1| predicted protein [Populus trichocarpa] gi|222861621|gb|EEE99163.1|
           predicted protein [Populus trichocarpa]
          Length = 85

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 3/69 (4%)
 Frame = +2

Query: 50  METVPITNISRQDQGHIG---KERCGGFQMPLHYPRYTKADYETMPEWKLDCLLSQYGLH 220
           ME+V     +R ++G  G   KE+ G FQMPLHYPRYT+ DYETM EWKLDCLL +YGL 
Sbjct: 6   MESVQRPASNRGNKGQNGQHEKEQSGSFQMPLHYPRYTRDDYETMQEWKLDCLLREYGLP 65

Query: 221 FSGSLQEKR 247
            +G ++EKR
Sbjct: 66  ITGDVEEKR 74


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