BLASTX nr result

ID: Dioscorea21_contig00003023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003023
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ86974.1| predicted protein [Hordeum vulgare subsp. vulgare]    280   3e-73
ref|NP_001054044.1| Os04g0641400 [Oryza sativa Japonica Group] g...   275   6e-72
emb|CAC09457.2| H0423H10.3 [Oryza sativa Indica Group] gi|222629...   275   6e-72
gb|ACR38286.1| unknown [Zea mays] gi|413919701|gb|AFW59633.1| pu...   274   1e-71
ref|NP_001148621.1| LOC100282237 [Zea mays] gi|195620868|gb|ACG3...   274   1e-71

>dbj|BAJ86974.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 244

 Score =  280 bits (715), Expect = 3e-73
 Identities = 138/221 (62%), Positives = 174/221 (78%)
 Frame = +3

Query: 3   TERDVYDFFSFSGAIEHIEIIRSGDYASTAYVTFKEPHSLETAVLLSGATIVDQRVCITH 182
           +E D+++FFSFSG IEHI++IRSG Y STAYVTFKEP++LETAVLLSGATIVDQ VCI+ 
Sbjct: 18  SENDLHEFFSFSGPIEHIDLIRSGGYGSTAYVTFKEPYALETAVLLSGATIVDQPVCISR 77

Query: 183 WGQTEDASGIWDRPSWRIEDDYESMSSEANSFRTTPREAVTMAQEVVKTMLSKGYILSVD 362
           WGQ ++ S  WDRP+W++E++ E    ++  F  TP+EA+T+AQ+VVKTMLS+GYILS D
Sbjct: 78  WGQPDEPSNFWDRPTWQVEEEIEYRDYQSCQFNATPQEALTVAQDVVKTMLSRGYILSKD 137

Query: 363 ALSKAKAFDESHQVSATAAAKVAELSKRIGLTDKVYAGVNAVRSVDETYHVSETTKMXXX 542
           ALS+A+AFDESHQ+S +AAAK AELS+R+GLTD+V AGV A+RSVDETYHV+ETTK    
Sbjct: 138 ALSRARAFDESHQLSGSAAAKAAELSRRLGLTDRVSAGVGAIRSVDETYHVTETTKTVAT 197

Query: 543 XXXXXXXXXXXXXMNSSYFAAGAIWLSEALNRASKATAELA 665
                        + SSYF+AGA+ LSEAL RA+KA   LA
Sbjct: 198 ATGRTAVKVMNTIVTSSYFSAGAMMLSEALTRAAKAAENLA 238


>ref|NP_001054044.1| Os04g0641400 [Oryza sativa Japonica Group]
           gi|38344906|emb|CAD41850.2| OSJNBb0079B02.9 [Oryza
           sativa Japonica Group] gi|38347315|emb|CAE05963.2|
           OSJNBa0063C18.4 [Oryza sativa Japonica Group]
           gi|90399224|emb|CAH68137.1| B0414F07.7 [Oryza sativa
           Indica Group] gi|113565615|dbj|BAF15958.1| Os04g0641400
           [Oryza sativa Japonica Group]
           gi|215766559|dbj|BAG98718.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 251

 Score =  275 bits (703), Expect = 6e-72
 Identities = 141/228 (61%), Positives = 175/228 (76%), Gaps = 7/228 (3%)
 Frame = +3

Query: 3   TERDVYDFFSFSGAIEHIEIIRSGDYASTAYVTFKEPHSLETAVLLSGATIVDQRVCITH 182
           +E D+++FFSFSGAIEHIE+IRSG+Y STAYVTFKEP+SLETAVLLSGATIVDQ VCI  
Sbjct: 18  SESDLHEFFSFSGAIEHIELIRSGEYGSTAYVTFKEPYSLETAVLLSGATIVDQPVCIAR 77

Query: 183 WGQTEDASGIWDRPSWRIEDDYESMSSEANSFRTTPREAVTMAQEVVKTMLSKGYILSVD 362
           WGQ  +    WD P+W  E++ E  + +   F +TP+EA+T+AQ+VVKTML++GY+LS D
Sbjct: 78  WGQPNEPYNFWDTPNWYTEEEIEYRTYQTCQFNSTPQEALTIAQDVVKTMLARGYVLSKD 137

Query: 363 ALSKAKAFDESHQVSATAAAKVAELSKRI-------GLTDKVYAGVNAVRSVDETYHVSE 521
           AL++A+AFDESHQV+ATAAAK AELSKRI       GLTD+V AGV A+RSVDETYHVSE
Sbjct: 138 ALARARAFDESHQVTATAAAKAAELSKRIGLTDRVSGLTDRVSAGVGAIRSVDETYHVSE 197

Query: 522 TTKMXXXXXXXXXXXXXXXXMNSSYFAAGAIWLSEALNRASKATAELA 665
           TTK                 M SSYF+AGA+ LS+AL+RA++A A+LA
Sbjct: 198 TTKTVATATGRTAVKVVNGIMTSSYFSAGAMMLSDALHRAAQAAADLA 245


>emb|CAC09457.2| H0423H10.3 [Oryza sativa Indica Group] gi|222629654|gb|EEE61786.1|
           hypothetical protein OsJ_16368 [Oryza sativa Japonica
           Group]
          Length = 291

 Score =  275 bits (703), Expect = 6e-72
 Identities = 141/228 (61%), Positives = 175/228 (76%), Gaps = 7/228 (3%)
 Frame = +3

Query: 3   TERDVYDFFSFSGAIEHIEIIRSGDYASTAYVTFKEPHSLETAVLLSGATIVDQRVCITH 182
           +E D+++FFSFSGAIEHIE+IRSG+Y STAYVTFKEP+SLETAVLLSGATIVDQ VCI  
Sbjct: 58  SESDLHEFFSFSGAIEHIELIRSGEYGSTAYVTFKEPYSLETAVLLSGATIVDQPVCIAR 117

Query: 183 WGQTEDASGIWDRPSWRIEDDYESMSSEANSFRTTPREAVTMAQEVVKTMLSKGYILSVD 362
           WGQ  +    WD P+W  E++ E  + +   F +TP+EA+T+AQ+VVKTML++GY+LS D
Sbjct: 118 WGQPNEPYNFWDTPNWYTEEEIEYRTYQTCQFNSTPQEALTIAQDVVKTMLARGYVLSKD 177

Query: 363 ALSKAKAFDESHQVSATAAAKVAELSKRI-------GLTDKVYAGVNAVRSVDETYHVSE 521
           AL++A+AFDESHQV+ATAAAK AELSKRI       GLTD+V AGV A+RSVDETYHVSE
Sbjct: 178 ALARARAFDESHQVTATAAAKAAELSKRIGLTDRVSGLTDRVSAGVGAIRSVDETYHVSE 237

Query: 522 TTKMXXXXXXXXXXXXXXXXMNSSYFAAGAIWLSEALNRASKATAELA 665
           TTK                 M SSYF+AGA+ LS+AL+RA++A A+LA
Sbjct: 238 TTKTVATATGRTAVKVVNGIMTSSYFSAGAMMLSDALHRAAQAAADLA 285


>gb|ACR38286.1| unknown [Zea mays] gi|413919701|gb|AFW59633.1| putative RNA
           recognition motif containing family protein isoform 1
           [Zea mays] gi|413919702|gb|AFW59634.1| putative RNA
           recognition motif containing family protein isoform 2
           [Zea mays]
          Length = 244

 Score =  274 bits (700), Expect = 1e-71
 Identities = 136/221 (61%), Positives = 173/221 (78%)
 Frame = +3

Query: 3   TERDVYDFFSFSGAIEHIEIIRSGDYASTAYVTFKEPHSLETAVLLSGATIVDQRVCITH 182
           +E D+Y+FFSFSG IEH+E+IRSG+Y +TAYVTFKE  +LETAVLLSGATIVDQ VCIT+
Sbjct: 18  SESDLYEFFSFSGPIEHVELIRSGEYGATAYVTFKERFALETAVLLSGATIVDQPVCITY 77

Query: 183 WGQTEDASGIWDRPSWRIEDDYESMSSEANSFRTTPREAVTMAQEVVKTMLSKGYILSVD 362
           WGQ E+    WDRP+W +E++ E  S ++  + TTP+EA+T+AQ++VKTML+KGY+LS D
Sbjct: 78  WGQPEETFNFWDRPTWEVEEEIEYTSYQSCQYNTTPQEALTVAQDIVKTMLAKGYVLSKD 137

Query: 363 ALSKAKAFDESHQVSATAAAKVAELSKRIGLTDKVYAGVNAVRSVDETYHVSETTKMXXX 542
           AL+KA+AFDES  ++A AAAK AELSKRIGLTD+V AGV A+RSVDETY V+ETTK    
Sbjct: 138 ALAKARAFDESRGLTAAAAAKAAELSKRIGLTDRVSAGVGAMRSVDETYRVTETTKTVAT 197

Query: 543 XXXXXXXXXXXXXMNSSYFAAGAIWLSEALNRASKATAELA 665
                        + SSYF+AGA+ LS+AL RA+KA A+LA
Sbjct: 198 ATGRTAAKVVNGIVTSSYFSAGAMMLSDALTRAAKAAADLA 238


>ref|NP_001148621.1| LOC100282237 [Zea mays] gi|195620868|gb|ACG32264.1| RNA recognition
           motif containing protein [Zea mays]
          Length = 244

 Score =  274 bits (700), Expect = 1e-71
 Identities = 136/221 (61%), Positives = 173/221 (78%)
 Frame = +3

Query: 3   TERDVYDFFSFSGAIEHIEIIRSGDYASTAYVTFKEPHSLETAVLLSGATIVDQRVCITH 182
           +E D+Y+FFSFSG IEH+E+IRSG+Y +TAYVTFKE  +LETAVLLSGATIVDQ VCIT+
Sbjct: 18  SESDLYEFFSFSGPIEHVELIRSGEYGATAYVTFKERFALETAVLLSGATIVDQPVCITY 77

Query: 183 WGQTEDASGIWDRPSWRIEDDYESMSSEANSFRTTPREAVTMAQEVVKTMLSKGYILSVD 362
           WGQ E+    WDRP+W +E++ E  S ++  + TTP+EA+T+AQ++VKTML+KGY+LS D
Sbjct: 78  WGQPEETFNFWDRPTWEVEEEIEYTSYQSCQYNTTPQEALTVAQDIVKTMLAKGYVLSKD 137

Query: 363 ALSKAKAFDESHQVSATAAAKVAELSKRIGLTDKVYAGVNAVRSVDETYHVSETTKMXXX 542
           AL+KA+AFDES  ++A AAAK AELSKRIGLTD+V AGV A+RSVDETY V+ETTK    
Sbjct: 138 ALAKARAFDESRGLTAAAAAKAAELSKRIGLTDRVSAGVGAMRSVDETYRVTETTKTVAT 197

Query: 543 XXXXXXXXXXXXXMNSSYFAAGAIWLSEALNRASKATAELA 665
                        + SSYF+AGA+ LS+AL RA+KA A+LA
Sbjct: 198 ATGITAAKVVNGIVTSSYFSAGAMMLSDALTRAAKAAADLA 238


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