BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002998
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II su...   220   1e-55
dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare]    218   4e-55
dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgar...   218   4e-55
ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group] g...   217   9e-55
ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II su...   216   2e-54

>ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Brachypodium distachyon]
          Length = 177

 Score =  220 bits (560), Expect = 1e-55
 Identities = 119/172 (69%), Positives = 124/172 (72%)
 Frame = +1

Query: 1   VAKLMKDVEGTCSGRHGFVVAITGVDDIGKGLIREGTGFVTFPVRYQCVVFRPFKGEILE 180
           VAKLMKDVEGTCSGRHGFVVAITGV+DIGKGLIREGTGFVTFPV+YQCVVFRPFKGEILE
Sbjct: 27  VAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGFVTFPVKYQCVVFRPFKGEILE 86

Query: 181 AVVTMVNKMGFFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           AVVTMVNKMGFFA                                               
Sbjct: 87  AVVTMVNKMGFFA----------------------EAGPVQIFVSNHLIPDDMEFQSGDV 124

Query: 361 PNYTTSDRSVRIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 516
           PNYTTSD SV+IQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPGAA
Sbjct: 125 PNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGAA 176


>dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 236

 Score =  218 bits (556), Expect = 4e-55
 Identities = 118/172 (68%), Positives = 123/172 (71%)
 Frame = +1

Query: 1   VAKLMKDVEGTCSGRHGFVVAITGVDDIGKGLIREGTGFVTFPVRYQCVVFRPFKGEILE 180
           VAKLMKDVEGTCSGRHGFVVAITGV+DIGKGLIREGTGFVTFPV+YQCVVFRPFKGEILE
Sbjct: 86  VAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGFVTFPVKYQCVVFRPFKGEILE 145

Query: 181 AVVTMVNKMGFFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           AVVTMVNKMGFFA                                               
Sbjct: 146 AVVTMVNKMGFFA----------------------EAGPVQIFVSNHLIPDDMEFQSGDV 183

Query: 361 PNYTTSDRSVRIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 516
           PNYTTSD SV+IQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPG A
Sbjct: 184 PNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGGA 235


>dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326505504|dbj|BAJ95423.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 177

 Score =  218 bits (556), Expect = 4e-55
 Identities = 118/172 (68%), Positives = 123/172 (71%)
 Frame = +1

Query: 1   VAKLMKDVEGTCSGRHGFVVAITGVDDIGKGLIREGTGFVTFPVRYQCVVFRPFKGEILE 180
           VAKLMKDVEGTCSGRHGFVVAITGV+DIGKGLIREGTGFVTFPV+YQCVVFRPFKGEILE
Sbjct: 27  VAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGFVTFPVKYQCVVFRPFKGEILE 86

Query: 181 AVVTMVNKMGFFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           AVVTMVNKMGFFA                                               
Sbjct: 87  AVVTMVNKMGFFA----------------------EAGPVQIFVSNHLIPDDMEFQSGDV 124

Query: 361 PNYTTSDRSVRIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 516
           PNYTTSD SV+IQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPG A
Sbjct: 125 PNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGGA 176


>ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group]
           gi|50878367|gb|AAT85142.1| putative RNA polymerase II
           subunit 5 [Oryza sativa Japonica Group]
           gi|113579034|dbj|BAF17397.1| Os05g0400700 [Oryza sativa
           Japonica Group] gi|125552268|gb|EAY97977.1| hypothetical
           protein OsI_19896 [Oryza sativa Indica Group]
           gi|215704281|dbj|BAG93121.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218196761|gb|EEC79188.1| hypothetical protein
           OsI_19893 [Oryza sativa Indica Group]
           gi|222631528|gb|EEE63660.1| hypothetical protein
           OsJ_18478 [Oryza sativa Japonica Group]
          Length = 177

 Score =  217 bits (553), Expect = 9e-55
 Identities = 116/172 (67%), Positives = 124/172 (72%)
 Frame = +1

Query: 1   VAKLMKDVEGTCSGRHGFVVAITGVDDIGKGLIREGTGFVTFPVRYQCVVFRPFKGEILE 180
           V+KL+KDVEGTCSGRHGFVVAITGV+D+GKGLIREGTG+VTFPV+YQCVVFRPFKGEILE
Sbjct: 27  VSKLIKDVEGTCSGRHGFVVAITGVEDVGKGLIREGTGYVTFPVKYQCVVFRPFKGEILE 86

Query: 181 AVVTMVNKMGFFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           AVVTMVNKMGFFA                                               
Sbjct: 87  AVVTMVNKMGFFA----------------------EAGPVQIFVSNHLIPDDMEFQSGDV 124

Query: 361 PNYTTSDRSVRIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 516
           PNYTTSD SV+IQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPGAA
Sbjct: 125 PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGAA 176


>ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Cucumis sativus] gi|449518487|ref|XP_004166273.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB7-like [Cucumis sativus]
          Length = 176

 Score =  216 bits (551), Expect = 2e-54
 Identities = 116/172 (67%), Positives = 123/172 (71%)
 Frame = +1

Query: 1   VAKLMKDVEGTCSGRHGFVVAITGVDDIGKGLIREGTGFVTFPVRYQCVVFRPFKGEILE 180
           V+KLMKDVEGTCSGRHGFVVAITG+++IGKGLIR+GTGFVTFPV+YQCVVFRPFKGEILE
Sbjct: 27  VSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILE 86

Query: 181 AVVTMVNKMGFFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           AVVTMVNKMGFFA                                               
Sbjct: 87  AVVTMVNKMGFFA----------------------EAGPVQIFVSNHLIPDDMEFQSGDV 124

Query: 361 PNYTTSDRSVRIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 516
           PNYTTSD SV+IQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP AA
Sbjct: 125 PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPSAA 176