BLASTX nr result

ID: Dioscorea21_contig00002720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002720
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADG58052.1| transcription factor [Lycoris longituba]                79   4e-13
gb|ADG58033.1| transcription factor [Lycoris longituba]                79   4e-13
ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containin...    68   9e-10
ref|XP_002302855.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_003633700.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...    63   3e-08

>gb|ADG58052.1| transcription factor [Lycoris longituba]
          Length = 303

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
 Frame = +1

Query: 1   GGLSAWTLSRPPYVSNNMQGLPAYMPVTIP-PSQGAIHLQHGWSTYVGNAGHAPSTDVLG 177
           GGLSAW L+RP   +  MQGL  Y+PV +P PSQGA+ +Q GWSTY G+    PSTDV G
Sbjct: 91  GGLSAWPLARPYIPNPRMQGLSTYVPVILPQPSQGAMPMQQGWSTYTGSVSELPSTDVHG 150

Query: 178 -LQMXXXXXXXXXXXXXXPFFPERPDQP 258
             Q+                 PERPDQP
Sbjct: 151 HAQIPNTKLHAHSGSSTTINLPERPDQP 178


>gb|ADG58033.1| transcription factor [Lycoris longituba]
          Length = 146

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
 Frame = +1

Query: 1   GGLSAWTLSRPPYVSNNMQGLPAYMPVTIP-PSQGAIHLQHGWSTYVGNAGHAPSTDVLG 177
           GGLSAW L+RP   +  MQGL AY+PV +P PSQGA+ +Q  WSTY G+    PSTDV G
Sbjct: 5   GGLSAWPLARPYLPNPRMQGLSAYVPVILPQPSQGAMPMQQSWSTYTGSVSQLPSTDVRG 64

Query: 178 -LQMXXXXXXXXXXXXXXPFFPERPDQP 258
             Q+                 PERPDQP
Sbjct: 65  HAQIPNMKLHGHSGSSTTMNLPERPDQP 92


>ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis
           vinifera] gi|297739220|emb|CBI28871.3| unnamed protein
           product [Vitis vinifera]
          Length = 450

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/96 (39%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
 Frame = +1

Query: 1   GGLSAWTLSRPPYVSN-NMQGLPAYMPVTIPPSQGAIHLQHGWSTYVGNAGHAPSTDVLG 177
           GGL AW+L R PY+    MQG   YMP+ + PSQG +  Q GW+TY+GN     ST +LG
Sbjct: 194 GGLPAWSLPRAPYIPGPRMQGPQTYMPIVLSPSQGIVPAQ-GWNTYMGNMSPISSTGILG 252

Query: 178 LQM---------XXXXXXXXXXXXXXPFFPERPDQP 258
             +                       P  PERPDQP
Sbjct: 253 SNLVYNSRNQSESGSSGQVHLLSSLIPHLPERPDQP 288


>ref|XP_002302855.1| predicted protein [Populus trichocarpa] gi|222844581|gb|EEE82128.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/95 (41%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
 Frame = +1

Query: 1   GGLSAWTLSR-PPYVSN-NMQGLPAYMPVTIPPSQGAIHLQHGWSTYVGNAGHAPSTDVL 174
           GGL  W+L R PPY+S  ++QG  AYMPV + PSQG + +  GW+TYVGN+    S+ +L
Sbjct: 196 GGLPTWSLPRAPPYMSGTHLQGPQAYMPVVVSPSQGIVPVP-GWNTYVGNSNPMSSSSIL 254

Query: 175 GLQM-------XXXXXXXXXXXXXXPFFPERPDQP 258
           G                        P  PERPDQP
Sbjct: 255 GSNRAYDSRNHGDSGSSGHLLSTAIPALPERPDQP 289


>ref|XP_003633700.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
           protein 3-like [Vitis vinifera]
          Length = 324

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/96 (38%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
 Frame = +1

Query: 1   GGLSAWTLSRPPYVSN-NMQGLPAYMPVTIPPSQGAIHLQHGWSTYVGNAGHAPSTDVLG 177
           GG+ AW L R PY+    MQG   YMP+ + PSQG I  Q GW+TY+GN     ST +LG
Sbjct: 132 GGIPAWLLPRAPYMPGPRMQGPQTYMPIVLSPSQGIIPAQ-GWNTYMGNMSPISSTSILG 190

Query: 178 LQM---------XXXXXXXXXXXXXXPFFPERPDQP 258
             +                       P  PER DQP
Sbjct: 191 SNLVYNTKNPSESSSNGQVHLLSLSIPHLPERRDQP 226


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