BLASTX nr result

ID: Dioscorea21_contig00002496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002496
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001059424.1| Os07g0301200 [Oryza sativa Japonica Group] g...   204   6e-51
gb|EEE58128.1| hypothetical protein OsJ_09027 [Oryza sativa Japo...   204   6e-51
gb|EEC70450.1| hypothetical protein OsI_01481 [Oryza sativa Indi...   204   6e-51
dbj|BAC78594.1| RNA helicase [Oryza sativa Japonica Group]            204   6e-51
ref|XP_002890959.1| predicted protein [Arabidopsis lyrata subsp....   203   1e-50

>ref|NP_001059424.1| Os07g0301200 [Oryza sativa Japonica Group]
           gi|75325214|sp|Q6YS30.1|RH5_ORYSJ RecName: Full=DEAD-box
           ATP-dependent RNA helicase 5 gi|34394349|dbj|BAC84904.1|
           putative RNA helicase [Oryza sativa Japonica Group]
           gi|113610960|dbj|BAF21338.1| Os07g0301200 [Oryza sativa
           Japonica Group]
          Length = 512

 Score =  204 bits (519), Expect = 6e-51
 Identities = 98/108 (90%), Positives = 105/108 (97%)
 Frame = +1

Query: 1   GLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENKALAGELVNVLREA 180
           GLDIPDVEVVINYS+PLTTEDYVHRIGRTGRAGKKGVAHTFFTQENK LAGELVNVLREA
Sbjct: 405 GLDIPDVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENKGLAGELVNVLREA 464

Query: 181 GQIVPEALTKFGTHVKKKESKLYGSHFKEIKADAPKSTKITFANSDDE 324
           GQ+VP ALTKFGTHVKKKES++YGSHFKEIKADAPKSTKITF +SD++
Sbjct: 465 GQVVPPALTKFGTHVKKKESQIYGSHFKEIKADAPKSTKITFGDSDED 512


>gb|EEE58128.1| hypothetical protein OsJ_09027 [Oryza sativa Japonica Group]
          Length = 575

 Score =  204 bits (519), Expect = 6e-51
 Identities = 98/108 (90%), Positives = 105/108 (97%)
 Frame = +1

Query: 1   GLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENKALAGELVNVLREA 180
           GLDIPDVEVVINYS+PLTTEDYVHRIGRTGRAGKKGVAHTFFTQENK LAGELVNVLREA
Sbjct: 468 GLDIPDVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENKGLAGELVNVLREA 527

Query: 181 GQIVPEALTKFGTHVKKKESKLYGSHFKEIKADAPKSTKITFANSDDE 324
           GQ+VP ALTKFGTHVKKKES++YGSHFKEIKADAPKSTKITF +SD++
Sbjct: 528 GQVVPPALTKFGTHVKKKESQIYGSHFKEIKADAPKSTKITFGDSDED 575


>gb|EEC70450.1| hypothetical protein OsI_01481 [Oryza sativa Indica Group]
          Length = 512

 Score =  204 bits (519), Expect = 6e-51
 Identities = 98/108 (90%), Positives = 105/108 (97%)
 Frame = +1

Query: 1   GLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENKALAGELVNVLREA 180
           GLDIPDVEVVINYS+PLTTEDYVHRIGRTGRAGKKGVAHTFFTQENK LAGELVNVLREA
Sbjct: 405 GLDIPDVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENKGLAGELVNVLREA 464

Query: 181 GQIVPEALTKFGTHVKKKESKLYGSHFKEIKADAPKSTKITFANSDDE 324
           GQ+VP ALTKFGTHVKKKES++YGSHFKEIKADAPKSTKITF +SD++
Sbjct: 465 GQVVPPALTKFGTHVKKKESQIYGSHFKEIKADAPKSTKITFGDSDED 512


>dbj|BAC78594.1| RNA helicase [Oryza sativa Japonica Group]
          Length = 408

 Score =  204 bits (519), Expect = 6e-51
 Identities = 98/108 (90%), Positives = 105/108 (97%)
 Frame = +1

Query: 1   GLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENKALAGELVNVLREA 180
           GLDIPDVEVVINYS+PLTTEDYVHRIGRTGRAGKKGVAHTFFTQENK LAGELVNVLREA
Sbjct: 301 GLDIPDVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENKGLAGELVNVLREA 360

Query: 181 GQIVPEALTKFGTHVKKKESKLYGSHFKEIKADAPKSTKITFANSDDE 324
           GQ+VP ALTKFGTHVKKKES++YGSHFKEIKADAPKSTKITF +SD++
Sbjct: 361 GQVVPPALTKFGTHVKKKESQIYGSHFKEIKADAPKSTKITFGDSDED 408


>ref|XP_002890959.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336801|gb|EFH67218.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 539

 Score =  203 bits (516), Expect = 1e-50
 Identities = 98/109 (89%), Positives = 104/109 (95%)
 Frame = +1

Query: 1   GLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENKALAGELVNVLREA 180
           GLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFTQ+NK LAGELVNVLREA
Sbjct: 431 GLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFTQQNKGLAGELVNVLREA 490

Query: 181 GQIVPEALTKFGTHVKKKESKLYGSHFKEIKADAPKSTKITFANSDDEE 327
           GQ+VP+ L KFGTHVKKKESKLYG+HFKEI ADAPK+TKITF NSDDE+
Sbjct: 491 GQVVPDDLLKFGTHVKKKESKLYGAHFKEIAADAPKATKITFDNSDDED 539


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