BLASTX nr result
ID: Dioscorea21_contig00002490
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00002490
(1018 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplast... 384 e-135
ref|XP_002277301.1| PREDICTED: elongation factor Tu, chloroplast... 382 e-134
ref|XP_003523105.1| PREDICTED: elongation factor Tu, chloroplast... 374 e-131
ref|XP_003526993.1| PREDICTED: elongation factor Tu, chloroplast... 374 e-131
sp|Q43467.1|EFTU1_SOYBN RecName: Full=Elongation factor Tu, chlo... 374 e-131
>ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplastic-like isoform 1 [Vitis
vinifera] gi|359488736|ref|XP_003633809.1| PREDICTED:
elongation factor Tu, chloroplastic-like isoform 2 [Vitis
vinifera] gi|359488738|ref|XP_003633810.1| PREDICTED:
elongation factor Tu, chloroplastic-like isoform 3 [Vitis
vinifera]
Length = 487
Score = 384 bits (987), Expect(2) = e-135
Identities = 196/239 (82%), Positives = 205/239 (85%)
Frame = -1
Query: 1018 VDHGKXXXXXXXXXXXXXLGNSAPKRYDEIDAAPEERARGITINTATVEYETESRHYAHV 839
VDHGK +GNSAPK+YDEIDAAPEERARGITINTATVEYETESRHYAHV
Sbjct: 99 VDHGKTTLTAALTMALASMGNSAPKKYDEIDAAPEERARGITINTATVEYETESRHYAHV 158
Query: 838 DCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXX 659
DCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNK
Sbjct: 159 DCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQ 218
Query: 658 XXXXXXXXXXXXXXXXXLSSYEFPGDDIPIISGSALLALEALMANPSIKRGEDPWVDKIY 479
L+SYEFPGDDIPI+SGSALLALEALMANPSIKRGE+ WVDKIY
Sbjct: 219 VDDEELLQLVELEVRELLASYEFPGDDIPIVSGSALLALEALMANPSIKRGENEWVDKIY 278
Query: 478 ELMDAVDSYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTVKVGETLEIVGLR 302
ELMDAVDSYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGT+KVGET+++VGLR
Sbjct: 279 ELMDAVDSYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLR 337
Score = 123 bits (309), Expect(2) = e-135
Identities = 57/62 (91%), Positives = 62/62 (100%)
Frame = -3
Query: 188 DEAIAGDNVGLLLRGMQKADIQRGMVLAKPGTITPHTKFTAVVYVLKKEEGGRHSPFFAG 9
DEA+AGDNVGLLLRG+QKADIQRGMVLAKPGTITPHTKF+A+VY+LKKEEGGRHSPFFAG
Sbjct: 355 DEALAGDNVGLLLRGIQKADIQRGMVLAKPGTITPHTKFSAIVYILKKEEGGRHSPFFAG 414
Query: 8 YR 3
YR
Sbjct: 415 YR 416
>ref|XP_002277301.1| PREDICTED: elongation factor Tu, chloroplastic-like [Vitis vinifera]
Length = 486
Score = 382 bits (982), Expect(2) = e-134
Identities = 194/239 (81%), Positives = 205/239 (85%)
Frame = -1
Query: 1018 VDHGKXXXXXXXXXXXXXLGNSAPKRYDEIDAAPEERARGITINTATVEYETESRHYAHV 839
VDHGK +GNSAPK+YDEIDAAPEERARGITINTATVEYETE+RHYAHV
Sbjct: 98 VDHGKTTLTAALTMALAAMGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHV 157
Query: 838 DCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXX 659
DCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNK
Sbjct: 158 DCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQ 217
Query: 658 XXXXXXXXXXXXXXXXXLSSYEFPGDDIPIISGSALLALEALMANPSIKRGEDPWVDKIY 479
LSSYEFPGDD+PIISGSALLALEALMANPSIKRGE+ WVDKIY
Sbjct: 218 VDDEELLQLVELEVRELLSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIY 277
Query: 478 ELMDAVDSYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTVKVGETLEIVGLR 302
ELMD+VDSYIPIPQRQTDLPFLLA+EDVFSITGRGTVATGRVERGT+KVGET++IVGL+
Sbjct: 278 ELMDSVDSYIPIPQRQTDLPFLLAIEDVFSITGRGTVATGRVERGTIKVGETVDIVGLK 336
Score = 122 bits (307), Expect(2) = e-134
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = -3
Query: 188 DEAIAGDNVGLLLRGMQKADIQRGMVLAKPGTITPHTKFTAVVYVLKKEEGGRHSPFFAG 9
DEA+AGDNVG+LLRG+QKADIQRGMVLAKPGTITPHTKF A+VYVLKKEEGGRHSPFFAG
Sbjct: 354 DEALAGDNVGILLRGVQKADIQRGMVLAKPGTITPHTKFAAIVYVLKKEEGGRHSPFFAG 413
Query: 8 YR 3
YR
Sbjct: 414 YR 415
>ref|XP_003523105.1| PREDICTED: elongation factor Tu, chloroplastic-like [Glycine max]
Length = 480
Score = 374 bits (961), Expect(2) = e-131
Identities = 191/239 (79%), Positives = 202/239 (84%)
Frame = -1
Query: 1018 VDHGKXXXXXXXXXXXXXLGNSAPKRYDEIDAAPEERARGITINTATVEYETESRHYAHV 839
VDHGK LGNSAPK+YDEIDAAPEERARGITINTATVEYETE+RHYAHV
Sbjct: 92 VDHGKTTLTAALTMALAALGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHV 151
Query: 838 DCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXX 659
DCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNK
Sbjct: 152 DCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQ 211
Query: 658 XXXXXXXXXXXXXXXXXLSSYEFPGDDIPIISGSALLALEALMANPSIKRGEDPWVDKIY 479
L+SYEFPGDD PI+SGSALLALEALMANP+IKRG++ WVDKIY
Sbjct: 212 VDDEELLQLVELEVRDLLTSYEFPGDDTPIVSGSALLALEALMANPAIKRGDNEWVDKIY 271
Query: 478 ELMDAVDSYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTVKVGETLEIVGLR 302
+LMD VD YIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTVKVGET+++VGLR
Sbjct: 272 KLMDEVDDYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTVKVGETVDLVGLR 330
Score = 122 bits (306), Expect(2) = e-131
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = -3
Query: 188 DEAIAGDNVGLLLRGMQKADIQRGMVLAKPGTITPHTKFTAVVYVLKKEEGGRHSPFFAG 9
DEA+AGDNVGLLLRG+QK DIQRGMVLAKPGTITPHTKF+A+VYVLKKEEGGRHSPFFAG
Sbjct: 348 DEALAGDNVGLLLRGVQKTDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFAG 407
Query: 8 YR 3
YR
Sbjct: 408 YR 409
>ref|XP_003526993.1| PREDICTED: elongation factor Tu, chloroplastic-like [Glycine max]
Length = 479
Score = 374 bits (961), Expect(2) = e-131
Identities = 190/239 (79%), Positives = 203/239 (84%)
Frame = -1
Query: 1018 VDHGKXXXXXXXXXXXXXLGNSAPKRYDEIDAAPEERARGITINTATVEYETESRHYAHV 839
VDHGK LGNSAPK+YDEIDAAPEERARGITINTATVEYETE+RHYAHV
Sbjct: 91 VDHGKTTLTAALTMALAALGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHV 150
Query: 838 DCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXX 659
DCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNK
Sbjct: 151 DCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQ 210
Query: 658 XXXXXXXXXXXXXXXXXLSSYEFPGDDIPIISGSALLALEALMANPSIKRGEDPWVDKIY 479
LSSYEFPGDD PI+SGSALLALEALMANP+IKRG++ WVDKI+
Sbjct: 211 VDDEELLQLVELEVRDLLSSYEFPGDDTPIVSGSALLALEALMANPAIKRGDNEWVDKIF 270
Query: 478 ELMDAVDSYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTVKVGETLEIVGLR 302
+LMD VD+YIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGT+KVGET+++VGLR
Sbjct: 271 QLMDEVDNYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLR 329
Score = 122 bits (306), Expect(2) = e-131
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = -3
Query: 188 DEAIAGDNVGLLLRGMQKADIQRGMVLAKPGTITPHTKFTAVVYVLKKEEGGRHSPFFAG 9
DEA+AGDNVGLLLRG+QK DIQRGMVLAKPGTITPHTKF+A+VYVLKKEEGGRHSPFFAG
Sbjct: 347 DEALAGDNVGLLLRGVQKTDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFAG 406
Query: 8 YR 3
YR
Sbjct: 407 YR 408
>sp|Q43467.1|EFTU1_SOYBN RecName: Full=Elongation factor Tu, chloroplastic; Short=EF-Tu;
Flags: Precursor gi|18776|emb|CAA46864.1| EF-Tu [Glycine
max] gi|448921|prf||1918220A elongation factor Tu
Length = 479
Score = 374 bits (959), Expect(2) = e-131
Identities = 189/239 (79%), Positives = 203/239 (84%)
Frame = -1
Query: 1018 VDHGKXXXXXXXXXXXXXLGNSAPKRYDEIDAAPEERARGITINTATVEYETESRHYAHV 839
VDHGK LGNSAPK+YDEIDAAPEERARGITINTATVEYETE+RHYAHV
Sbjct: 91 VDHGKTTLTAALTMALAALGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHV 150
Query: 838 DCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXX 659
DCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHI+LAKQVGVPNMVVFLNK
Sbjct: 151 DCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHIILAKQVGVPNMVVFLNKQDQ 210
Query: 658 XXXXXXXXXXXXXXXXXLSSYEFPGDDIPIISGSALLALEALMANPSIKRGEDPWVDKIY 479
LSSYEFPGDD PI+SGSALLALEALMANP+IKRG++ WVDKI+
Sbjct: 211 VDDEELLQLVEIEVRDLLSSYEFPGDDTPIVSGSALLALEALMANPAIKRGDNEWVDKIF 270
Query: 478 ELMDAVDSYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTVKVGETLEIVGLR 302
+LMD VD+YIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGT+KVGET+++VGLR
Sbjct: 271 QLMDEVDNYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLR 329
Score = 122 bits (306), Expect(2) = e-131
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = -3
Query: 188 DEAIAGDNVGLLLRGMQKADIQRGMVLAKPGTITPHTKFTAVVYVLKKEEGGRHSPFFAG 9
DEA+AGDNVGLLLRG+QK DIQRGMVLAKPGTITPHTKF+A+VYVLKKEEGGRHSPFFAG
Sbjct: 347 DEALAGDNVGLLLRGVQKTDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFAG 406
Query: 8 YR 3
YR
Sbjct: 407 YR 408