BLASTX nr result

ID: Dioscorea21_contig00002488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002488
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328387.1| predicted protein [Populus trichocarpa] gi|1...   103   1e-20
gb|ABK96338.1| unknown [Populus trichocarpa x Populus deltoides]      103   1e-20
ref|XP_003631979.1| PREDICTED: acyl carrier protein 1, chloropla...   102   2e-20
emb|CBI26122.3| unnamed protein product [Vitis vinifera]              102   2e-20
ref|XP_002269176.1| PREDICTED: acyl carrier protein 1, chloropla...   102   2e-20

>ref|XP_002328387.1| predicted protein [Populus trichocarpa] gi|118481393|gb|ABK92639.1|
           unknown [Populus trichocarpa]
           gi|118483648|gb|ABK93718.1| unknown [Populus
           trichocarpa] gi|222838102|gb|EEE76467.1| predicted
           protein [Populus trichocarpa]
          Length = 137

 Score =  103 bits (258), Expect = 1e-20
 Identities = 59/97 (60%), Positives = 69/97 (71%), Gaps = 8/97 (8%)
 Frame = +2

Query: 122 SLKGQGANGIFPLKSVSFSGKRRNFA-------PAR-LRVSCAAKPETVAKVCKIVRDQL 277
           S  G   + I  LK VS S + R++        PAR LRVSCAAKPETV KVC+IV+ QL
Sbjct: 13  SRHGMATSRICSLKPVSLSNQGRSYLSFGLRSMPARSLRVSCAAKPETVEKVCEIVKKQL 72

Query: 278 AVVEGTEINGETKFTALGADSLDTVEIVMNLEEKFGI 388
           A+ +GT + GE+KFTALGADSLDTVEIVM LEE FGI
Sbjct: 73  ALADGTPVTGESKFTALGADSLDTVEIVMGLEEAFGI 109


>gb|ABK96338.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 137

 Score =  103 bits (257), Expect = 1e-20
 Identities = 59/97 (60%), Positives = 69/97 (71%), Gaps = 8/97 (8%)
 Frame = +2

Query: 122 SLKGQGANGIFPLKSVSFSGKRRNFA-------PAR-LRVSCAAKPETVAKVCKIVRDQL 277
           S  G   + I  LK VS S + R++        PAR LRVSCAAKPETV KVC+IV+ QL
Sbjct: 13  SRHGMATSRICRLKPVSLSNQGRSYLSFGLRSMPARSLRVSCAAKPETVEKVCEIVKKQL 72

Query: 278 AVVEGTEINGETKFTALGADSLDTVEIVMNLEEKFGI 388
           A+ +GT + GE+KFTALGADSLDTVEIVM LEE FGI
Sbjct: 73  ALADGTPVTGESKFTALGADSLDTVEIVMGLEEAFGI 109


>ref|XP_003631979.1| PREDICTED: acyl carrier protein 1, chloroplastic-like [Vitis
           vinifera]
          Length = 138

 Score =  102 bits (255), Expect = 2e-20
 Identities = 52/78 (66%), Positives = 59/78 (75%)
 Frame = +2

Query: 155 PLKSVSFSGKRRNFAPARLRVSCAAKPETVAKVCKIVRDQLAVVEGTEINGETKFTALGA 334
           P+K  SF   R    P+RLRVSCAAKPETV KVC IVR QLA+   +E+ GE+KF  LGA
Sbjct: 34  PIKGKSFQSLRLRTGPSRLRVSCAAKPETVNKVCDIVRKQLALPADSEVTGESKFATLGA 93

Query: 335 DSLDTVEIVMNLEEKFGI 388
           DSLDTVEIVM LEE+FGI
Sbjct: 94  DSLDTVEIVMGLEEEFGI 111


>emb|CBI26122.3| unnamed protein product [Vitis vinifera]
          Length = 131

 Score =  102 bits (255), Expect = 2e-20
 Identities = 52/78 (66%), Positives = 59/78 (75%)
 Frame = +2

Query: 155 PLKSVSFSGKRRNFAPARLRVSCAAKPETVAKVCKIVRDQLAVVEGTEINGETKFTALGA 334
           P+K  SF   R    P+RLRVSCAAKPETV KVC IVR QLA+   +E+ GE+KF  LGA
Sbjct: 27  PIKGKSFQSLRLRTGPSRLRVSCAAKPETVNKVCDIVRKQLALPADSEVTGESKFATLGA 86

Query: 335 DSLDTVEIVMNLEEKFGI 388
           DSLDTVEIVM LEE+FGI
Sbjct: 87  DSLDTVEIVMGLEEEFGI 104


>ref|XP_002269176.1| PREDICTED: acyl carrier protein 1, chloroplastic isoform 1 [Vitis
           vinifera] gi|359487871|ref|XP_003633668.1| PREDICTED:
           acyl carrier protein 1, chloroplastic isoform 2 [Vitis
           vinifera] gi|359487873|ref|XP_003633669.1| PREDICTED:
           acyl carrier protein 1, chloroplastic isoform 3 [Vitis
           vinifera] gi|147814900|emb|CAN61533.1| hypothetical
           protein VITISV_011754 [Vitis vinifera]
           gi|298204982|emb|CBI34289.3| unnamed protein product
           [Vitis vinifera]
          Length = 139

 Score =  102 bits (255), Expect = 2e-20
 Identities = 57/96 (59%), Positives = 66/96 (68%), Gaps = 4/96 (4%)
 Frame = +2

Query: 113 PRVSLKGQGANGIFPLKSVSFSGKRRNFA----PARLRVSCAAKPETVAKVCKIVRDQLA 280
           PR+  +      I  LKS+SFS +         P RLRVSCAAKPETV KVC IV+ QLA
Sbjct: 15  PRLLRQSLATTSISSLKSLSFSNRGGRLTSQHLPLRLRVSCAAKPETVEKVCAIVKKQLA 74

Query: 281 VVEGTEINGETKFTALGADSLDTVEIVMNLEEKFGI 388
           + E + I GE+KF ALGADSLDTVEIVM LEE+FGI
Sbjct: 75  LPEDSAITGESKFAALGADSLDTVEIVMGLEEEFGI 110


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