BLASTX nr result

ID: Dioscorea21_contig00002487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002487
         (1910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263631.1| PREDICTED: uncharacterized protein LOC100254...   443   e-122
emb|CBI39048.3| unnamed protein product [Vitis vinifera]              377   e-102
dbj|BAC83046.1| putative RRM RNA binding protein NSAP1 [Oryza sa...   358   3e-96
ref|XP_002525717.1| conserved hypothetical protein [Ricinus comm...   352   2e-94
ref|NP_001175080.1| Os07g0180800 [Oryza sativa Japonica Group] g...   350   6e-94

>ref|XP_002263631.1| PREDICTED: uncharacterized protein LOC100254786 [Vitis vinifera]
          Length = 770

 Score =  443 bits (1139), Expect = e-122
 Identities = 229/428 (53%), Positives = 291/428 (67%)
 Frame = -3

Query: 1788 IEAQISAGDVEKGISERQRRRKTEIFIGGLDRDAKEEDIRKVFETVGEIVEVRMMMDALT 1609
            +E  ++    E    ERQ+RRKTEIFIGGLD+ A+EEDIRKVFE VGE++EVR+MM++ T
Sbjct: 309  VEDSMAVLSEEMEALERQKRRKTEIFIGGLDKSAREEDIRKVFEEVGEVLEVRLMMNSKT 368

Query: 1608 GKNKGYAFLRYAEATQAKKAVTVFKKVEVCGKLCGAAALEGNDTIFLGSIDKTWKKEDII 1429
            GKNKGYAFLR+A A+ AK+A+  + K+E+CGK CG A +EGNDTIFLG+IDK WK ED++
Sbjct: 369  GKNKGYAFLRFALASDAKRALAKYPKIEICGKQCGTAPVEGNDTIFLGNIDKNWKNEDVV 428

Query: 1428 KLLHEIGVEKIDAVTVMTDPKNADLNRGFAFLELESNRDAQKAFKLLQKKDVFGKGRNIK 1249
            KLL EIG++KID VTVM DP N + NRGFAFLELE+N+DAQ A+K LQKKDVFGK +NIK
Sbjct: 429  KLLQEIGIDKIDKVTVMVDPSNIERNRGFAFLELETNKDAQLAYKKLQKKDVFGKHQNIK 488

Query: 1248 VAWAEPLNDPDEEEMQKVKSVYVEGIPFSWGEEQLKERFEKFGNIERVVLARNIRSAKRK 1069
            VAWAEPLN+PDE+EM KVK+VY E IP SW EE++++ F+KFG IE VVLARN+RS+KRK
Sbjct: 489  VAWAEPLNEPDEDEMLKVKTVYAEYIPSSWEEEKVRDCFKKFGEIESVVLARNLRSSKRK 548

Query: 1068 DFAFVNYKTREDALSCIDLFEKEELMDNGSKINVKVSLAKPISXXXXXXXXXXXXXXXXX 889
            DFAFV Y TRE AL CI+ F +E L D   K+ VKVSLAKPI                  
Sbjct: 549  DFAFVKYTTREAALECIESFSREPLHDAECKVKVKVSLAKPIPKGKQIKRVSDPLSKDIS 608

Query: 888  XXXXXFIQRDMKINGPSSKGNLYKGGQSSSAGDRKSTSTHELLDPLRHQTPWKQGQPGYS 709
                   +RD+K N P +KG              +S++  EL+  LR Q  W+Q Q G  
Sbjct: 609  NQKPKATKRDIKPNNPRNKGKSIGNTYEEKNVVGRSSTNAELVQLLREQASWRQPQRGLG 668

Query: 708  RGPNLQDYSHASQGGKRAFAALGDEVHYSDLRGYPRPRLDTFPPAAGPSYGVMSHAIPSS 529
                  +Y ++  G KR + ALGD+  YSD R  PR  L++  P A P Y  +S  +   
Sbjct: 669  GASVNLEYPYSLPGSKRPYVALGDDPLYSDPRVRPRTHLESSFPVASPGYTAISQGV-GM 727

Query: 528  SSVPYHQR 505
            +S+ YH+R
Sbjct: 728  TSLSYHER 735


>emb|CBI39048.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  377 bits (968), Expect = e-102
 Identities = 195/373 (52%), Positives = 248/373 (66%)
 Frame = -3

Query: 1623 MDALTGKNKGYAFLRYAEATQAKKAVTVFKKVEVCGKLCGAAALEGNDTIFLGSIDKTWK 1444
            M++ TGKNKGYAFLR+A A+ AK+A+  + K+E+CGK CG A +EGNDTIFLG+IDK WK
Sbjct: 1    MNSKTGKNKGYAFLRFALASDAKRALAKYPKIEICGKQCGTAPVEGNDTIFLGNIDKNWK 60

Query: 1443 KEDIIKLLHEIGVEKIDAVTVMTDPKNADLNRGFAFLELESNRDAQKAFKLLQKKDVFGK 1264
             ED++KLL EIG++KID VTVM DP N + NRGFAFLELE+N+DAQ A+K LQKKDVFGK
Sbjct: 61   NEDVVKLLQEIGIDKIDKVTVMVDPSNIERNRGFAFLELETNKDAQLAYKKLQKKDVFGK 120

Query: 1263 GRNIKVAWAEPLNDPDEEEMQKVKSVYVEGIPFSWGEEQLKERFEKFGNIERVVLARNIR 1084
             +NIKVAWAEPLN+PDE+EM KVK+VY E IP SW EE++++ F+KFG IE VVLARN+R
Sbjct: 121  HQNIKVAWAEPLNEPDEDEMLKVKTVYAEYIPSSWEEEKVRDCFKKFGEIESVVLARNLR 180

Query: 1083 SAKRKDFAFVNYKTREDALSCIDLFEKEELMDNGSKINVKVSLAKPISXXXXXXXXXXXX 904
            S+KRKDFAFV Y TRE AL CI+ F +E L D   K+ VKVSLAKPI             
Sbjct: 181  SSKRKDFAFVKYTTREAALECIESFSREPLHDAECKVKVKVSLAKPIPKGKQIKRVSDPL 240

Query: 903  XXXXXXXXXXFIQRDMKINGPSSKGNLYKGGQSSSAGDRKSTSTHELLDPLRHQTPWKQG 724
                        +RD+K N P +KG              +S++  EL+  LR Q  W+Q 
Sbjct: 241  SKDISNQKPKATKRDIKPNNPRNKGKSIGNTYEEKNVVGRSSTNAELVQLLREQASWRQP 300

Query: 723  QPGYSRGPNLQDYSHASQGGKRAFAALGDEVHYSDLRGYPRPRLDTFPPAAGPSYGVMSH 544
            Q G        +Y ++  G KR + ALGD+  YSD R  PR  L++  P A P Y  +S 
Sbjct: 301  QRGLGGASVNLEYPYSLPGSKRPYVALGDDPLYSDPRVRPRTHLESSFPVASPGYTAISQ 360

Query: 543  AIPSSSSVPYHQR 505
             +   +S+ YH+R
Sbjct: 361  GV-GMTSLSYHER 372


>dbj|BAC83046.1| putative RRM RNA binding protein NSAP1 [Oryza sativa Japonica Group]
          Length = 613

 Score =  358 bits (919), Expect = 3e-96
 Identities = 201/418 (48%), Positives = 257/418 (61%), Gaps = 2/418 (0%)
 Frame = -3

Query: 1758 EKGISERQRRRKTEIFIGGLDRDAKEEDIRKVFETVGEIVEVRMMMDALTGKNKGYAFLR 1579
            E G+SER++R   E+F+GGL RDAKE+D+R VF   GEI EVRM+M+ L GKNKGY F+R
Sbjct: 224  EAGMSERRKRMTMEVFVGGLHRDAKEDDVRAVFAKAGEITEVRMIMNPLAGKNKGYCFVR 283

Query: 1578 YAEATQAKKAVTVFKKVEVCGKLCGAAALEGNDTIFLGSIDKTWKKEDIIKLLHEIGVEK 1399
            Y  A QAKKA+  F  V++CGKLC AA   GND IFLG+I+K WKKED+IK L +IG+E 
Sbjct: 284  YRHAAQAKKAIAEFGNVKICGKLCRAAVPVGNDRIFLGNINKKWKKEDVIKQLKKIGIEN 343

Query: 1398 IDAVTVMTDPKNADLNRGFAFLELESNRDAQKAFKLLQKKDVFGKGRNIKVAWAEPLNDP 1219
            ID+VT+ +D  N   NRGFAFLELE++RDA+ A+K L +K+ FGKG NI+VAWAEPLNDP
Sbjct: 344  IDSVTLKSDSNNPVCNRGFAFLELETSRDARMAYKKLSQKNAFGKGLNIRVAWAEPLNDP 403

Query: 1218 DEEEMQKVKSVYVEGIPFSWGEEQLKERFEKFGNIERVVLARNIRSAKRKDFAFVNYKTR 1039
            DE++MQ VKS++V+GIP SW   QLKE F+K G IE VVL+R++ SAKR+DFAF+NY TR
Sbjct: 404  DEKDMQ-VKSIFVDGIPTSWDHAQLKEIFKKHGKIESVVLSRDMPSAKRRDFAFINYITR 462

Query: 1038 EDALSCIDLFEKEELMDNGSKINVKVSLAKPISXXXXXXXXXXXXXXXXXXXXXXFIQRD 859
            E A+SC++ F+KEE   NGSK+N+KVSLAK                              
Sbjct: 463  EAAISCLESFDKEEFSKNGSKVNIKVSLAK------------------------------ 492

Query: 858  MKINGPSSKGNLYKGGQSSSAGDRKSTSTHELLDPLRHQTPWKQGQPGYSRGPNLQDYSH 679
                 P+ +    K    SS        T ++  P++                   DY+H
Sbjct: 493  -----PAQQSKQTKEDHKSSITGEGKMKTSKIRYPVQ-------------------DYTH 528

Query: 678  ASQGGKRAFAALGDEVHYSDLRGYP--RPRLDTFPPAAGPSYGVMSHAIPSSSSVPYH 511
               G KR F+ LGD   Y  LRG+   R    T+  AA  SYG +  A   SS   YH
Sbjct: 529  IYSGEKRPFSTLGDP--YYPLRGHSCRRHEGSTYTTAAS-SYGALPPATAESSLPHYH 583


>ref|XP_002525717.1| conserved hypothetical protein [Ricinus communis]
            gi|223535017|gb|EEF36700.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1034

 Score =  352 bits (903), Expect = 2e-94
 Identities = 174/267 (65%), Positives = 215/267 (80%)
 Frame = -3

Query: 1743 ERQRRRKTEIFIGGLDRDAKEEDIRKVFETVGEIVEVRMMMDALTGKNKGYAFLRYAEAT 1564
            ER+RRR+TEIFIGGL  DA+EEDIRKVF  VGEIVE+R++ ++ TGKNK +AFLRY+ A 
Sbjct: 492  ERRRRRRTEIFIGGLSTDAREEDIRKVFGAVGEIVELRLVTNSKTGKNKRFAFLRYSSAA 551

Query: 1563 QAKKAVTVFKKVEVCGKLCGAAALEGNDTIFLGSIDKTWKKEDIIKLLHEIGVEKIDAVT 1384
             AKKA+  + KVE+CGK C  A +EGNDTIFLG+IDK W   D+IKLL EIG+EKID V 
Sbjct: 552  DAKKALEKYAKVEICGKQCAVAPVEGNDTIFLGNIDKKWTNGDVIKLLQEIGIEKIDKVI 611

Query: 1383 VMTDPKNADLNRGFAFLELESNRDAQKAFKLLQKKDVFGKGRNIKVAWAEPLNDPDEEEM 1204
            VMTDP N   NRGFAF+ELE+++DAQ AFK L KKD+ GK +NIKVAWAEPL++PDEEE+
Sbjct: 612  VMTDPSNVGRNRGFAFVELETHKDAQIAFKKLHKKDL-GKLQNIKVAWAEPLSEPDEEEL 670

Query: 1203 QKVKSVYVEGIPFSWGEEQLKERFEKFGNIERVVLARNIRSAKRKDFAFVNYKTREDALS 1024
             KVKSVY E +P SW EE+L+  F KFG IE +VL+RN+ S++RKDFAF+N+ TRE AL+
Sbjct: 671  LKVKSVYAEYLPPSWDEEKLRSYFTKFGEIENIVLSRNLHSSRRKDFAFINFSTREAALA 730

Query: 1023 CIDLFEKEELMDNGSKINVKVSLAKPI 943
            CI+ F  E L + GS++NVKVSLAKPI
Sbjct: 731  CIESFYHETLTNEGSQVNVKVSLAKPI 757


>ref|NP_001175080.1| Os07g0180800 [Oryza sativa Japonica Group]
            gi|255677562|dbj|BAH93808.1| Os07g0180800 [Oryza sativa
            Japonica Group]
          Length = 650

 Score =  350 bits (899), Expect = 6e-94
 Identities = 170/271 (62%), Positives = 215/271 (79%)
 Frame = -3

Query: 1758 EKGISERQRRRKTEIFIGGLDRDAKEEDIRKVFETVGEIVEVRMMMDALTGKNKGYAFLR 1579
            E G+SER++R   E+F+GGL RDAKE+D+R VF   GEI EVRM+M+ L GKNKGY F+R
Sbjct: 224  EAGMSERRKRMTMEVFVGGLHRDAKEDDVRAVFAKAGEITEVRMIMNPLAGKNKGYCFVR 283

Query: 1578 YAEATQAKKAVTVFKKVEVCGKLCGAAALEGNDTIFLGSIDKTWKKEDIIKLLHEIGVEK 1399
            Y  A QAKKA+  F  V++CGKLC AA   GND IFLG+I+K WKKED+IK L +IG+E 
Sbjct: 284  YRHAAQAKKAIAEFGNVKICGKLCRAAVPVGNDRIFLGNINKKWKKEDVIKQLKKIGIEN 343

Query: 1398 IDAVTVMTDPKNADLNRGFAFLELESNRDAQKAFKLLQKKDVFGKGRNIKVAWAEPLNDP 1219
            ID+VT+ +D  N   NRGFAFLELE++RDA+ A+K L +K+ FGKG NI+VAWAEPLNDP
Sbjct: 344  IDSVTLKSDSNNPVCNRGFAFLELETSRDARMAYKKLSQKNAFGKGLNIRVAWAEPLNDP 403

Query: 1218 DEEEMQKVKSVYVEGIPFSWGEEQLKERFEKFGNIERVVLARNIRSAKRKDFAFVNYKTR 1039
            DE++MQ VKS++V+GIP SW   QLKE F+K G IE VVL+R++ SAKR+DFAF+NY TR
Sbjct: 404  DEKDMQ-VKSIFVDGIPTSWDHAQLKEIFKKHGKIESVVLSRDMPSAKRRDFAFINYITR 462

Query: 1038 EDALSCIDLFEKEELMDNGSKINVKVSLAKP 946
            E A+SC++ F+KEE   NGSK+N+KVSLAKP
Sbjct: 463  EAAISCLESFDKEEFSKNGSKVNIKVSLAKP 493


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